Stomatobaculum sp. F0698: QU660_01425
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Entry
QU660_01425 CDS
T09252
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QU660_01425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stom03021
]
QU660_01425
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_01425
Enzymes [BR:
stom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QU660_01425
Transcription machinery [BR:
stom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QU660_01425
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QU660_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Spectrin_7
DUF4332
Motif
Other DBs
NCBI-ProteinID:
WLD87010
LinkDB
All DBs
Position
282007..282993
Genome browser
AA seq
328 aa
AA seq
DB search
MFEFQKPNIEIAEISEDKTFGRFICEPLERGYGLTLGNSLRRIMLSSLPGTAVSQVKIAG
VLHEFSSIPQVKEDVTEIIMNIKSLAIKNSSTSQEPKIAYIDFEGEGEVTAADIQCDADI
EILNKDQVIATISGGSTKFSAELTITNGRGYVSAEKNKAQGDLPIGVIAVDSIYTPVERV
NMRVENTRVGQMTDYDKLTLDVFTDGTAAPDEAVSLAAKVLSEHLGLFVDLSENARRVEV
MSEKKSDEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELINKTPEDMMKVRNLGKKSL
DEVLEKLADLNLQLRQSEEMGEEEEEIQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgaatttcagaaaccaaatatcgagattgctgagatctccgaagacaaaacgttt
ggccgtttcatctgcgaaccgcttgagagaggctatggtctgacgctcggaaattccctg
cgccgcatcatgctctcctcccttccgggaaccgcggtgagccaggtgaagattgccggt
gtgctccatgagttctcttccatcccccaggtcaaggaggatgtgacggagattatcatg
aacatcaagagccttgcaatcaagaatagctcgacctcccaggaaccgaagatcgcctac
attgattttgaaggcgagggtgaggtcaccgctgcagacatccagtgcgatgctgacatt
gagatcctcaataaggatcaggtcattgcgaccatttccggcggcagcacgaagttctct
gcagagctcacgatcacaaacggacgcggctacgtcagcgcggagaagaataaggcgcag
ggtgacctgccgatcggcgtgattgcggtggattccatctacacgccggtggagcgcgtc
aacatgcgcgtggaaaacacccgtgtcggtcagatgacggactacgacaagctcacgctt
gacgtgtttaccgacggcacggcggcgccggatgaggcggtgagcctcgcggcgaaggtg
ctctcggagcacctgggtctcttcgtggatctctcggagaatgctcgcagagtcgaggtc
atgtccgagaagaagagcgacgagaaggaaaaagtgcttgagatgaacatcgatgagctt
gagctctcggtgcgttcctacaactgtttgaagcgcgcgggcatcaacacggtcgaagag
ttgatcaacaagacgccggaagacatgatgaaggtgagaaatctcggcaagaagtcgctc
gacgaagttctggaaaagcttgcggatctcaatttgcagctgcgccagagcgaagagatg
ggcgaagaggaagaagaaattcagtaa
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