Stomatobaculum sp. F0698: QU660_03255
Help
Entry
QU660_03255 CDS
T09252
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03410
Base excision repair
stom03430
Mismatch repair
stom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QU660_03255 (recJ)
03430 Mismatch repair
QU660_03255 (recJ)
03440 Homologous recombination
QU660_03255 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_03255 (recJ)
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QU660_03255 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QU660_03255 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QU660_03255 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Histone_HNS_N
DUF3209
Motif
Other DBs
NCBI-ProteinID:
WLD87354
LinkDB
All DBs
Position
682206..683924
Genome browser
AA seq
572 aa
AA seq
DB search
MRDTKWMVYSKRADFGAISARFSVSPMLARILINRDIAEDEMDTYLNGSLDAIPSGDLLP
DMARSVEILAEKIRARKSIRIIGDYDIDGVCSTYILLQGMRALGANADYDIPDRIADGYG
LNLRLVERAAAEGVDTIVTCDNGIAARNEVAAAVEQGLTVIVTDHHEVAHGEDGEELLPP
AHAVIDPKREGAQYPFSSICGAVVAWKLIEELYLHFGKPKEDARVLLPFAAIATVGDVMP
LRKENRIIVREGLKAIGSCENSGLQKLIARCELNPAALSTYHIGFVIGPCLNAGGRLESA
KLGLSMLLEEDETRAEEAAERLKALNDQRKQMTENGIRAASEEIDALPELPKVLVVYLKD
CHESVAGIIAGRLKEKYYRPSFVLTDSQEAGFLKGSGRSIEGYHMFHALEEVSPLLSKFG
GHPMAAGLTLPETELTSFREQLNRNAELSEAQLIETQWIDIALPFAYANEDLIAELSRME
PFGQGNVRPCFGQRHVEIRSARVLGKNRNVVKLSLRDEAGTVREAIAFTDGDAFLAEMAE
SKYFAVLYFPELNEYLGRTSLQLVLKAWKFER
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataccaagtggatggtttacagcaagcgggccgatttcggggcgatttcggcc
cgcttttccgtgtcgcccatgctcgcgcgtattttgattaaccgcgatatcgccgaggat
gagatggatacgtatttgaacgggagtcttgatgcgattccgagcggagatctgctgccc
gacatggcgcggagtgtcgaaattctggcggaaaaaatacgggcgcgaaagtcaatacgc
atcatcggagactacgacatcgacggtgtttgctcgacctacattctattgcagggcatg
cgggcgctcggcgcaaatgcggactatgatattccggaccgcattgcggacggctacggc
ctaaacctgcgcctggtggagcgcgcggcagccgagggtgtggataccatcgtgacttgc
gacaacggcattgcggcgcggaacgaagttgcggccgccgtggagcaggggctcacggtc
atcgtgacagatcaccacgaggtggcgcacggcgaagacggtgaggagttactgccgccc
gcccacgcggtcatagacccgaagcgcgagggggcgcagtatcccttttcttcgatctgc
ggcgcggtggtcgcctggaagctgattgaagagctctacctgcacttcggaaagcccaaa
gaggatgcaagggtgctgttgccctttgcggcgattgcgacggtcggcgatgtgatgccg
ctccgaaaggagaaccgcatcatcgtgcgagaagggctgaaagcaatcggcagctgcgag
aattcggggcttcaaaagctgattgcgcgctgcgagttaaacccggcggcgctttctacc
tatcacatcggctttgtgataggcccttgcttaaacgcgggcggccgtctggagagcgca
aagctcggactctcgatgcttttggaagaagatgaaacgcgggccgaagaggctgcggag
cgcctgaaggcgctgaacgatcagagaaagcagatgacggagaacggcatacgcgcggcc
tcggaggagatcgatgcgctgcccgaactcccgaaagtattggtggtctatctaaaggat
tgtcacgagtcggtggccggcatcattgcggggcggctcaaggagaagtactaccgcccg
agctttgtgctgacggacagtcaggaagccggatttttaaagggctcggggcgaagcatt
gagggctatcacatgtttcatgcgctcgaggaagtctctcccctcctcagcaaattcggc
gggcaccccatggcggcggggctcacgcttccggagaccgaattgacgagcttccgggag
caactcaatcgaaacgccgaactcagcgaagcgcagctcatagagacccagtggattgac
attgcgcttccctttgcctatgcgaacgaggatttgattgcggagctctcgcgcatggag
cccttcggacagggcaatgtgcgcccctgcttcgggcagaggcatgtggagatacggagc
gccagggtgctcggaaagaaccggaatgtcgtgaaattaagtctccgggacgaagccgga
acggtgagagaggcaattgccttcaccgacggcgacgccttccttgcggagatggcggaa
agcaagtatttcgctgtcctctattttccggaactgaacgaatatctcggcagaacaagc
ttgcaacttgtgttgaaagcatggaaatttgagcgctga
DBGET
integrated database retrieval system
