Stomatobaculum sp. F0698: QU660_04000
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Entry
QU660_04000 CDS
T09252
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03030
DNA replication
stom03430
Mismatch repair
stom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QU660_04000
03430 Mismatch repair
QU660_04000
03440 Homologous recombination
QU660_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stom03032
]
QU660_04000
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_04000
Enzymes [BR:
stom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QU660_04000
DNA replication proteins [BR:
stom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QU660_04000
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QU660_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
RNase_H_2
tRNA_anti-codon
DNA_pol3_a_NI
DEDDh_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WLD87485
LinkDB
All DBs
Position
842915..847453
Genome browser
AA seq
1512 aa
AA seq
DB search
MKNFCEVFPHFQATAAEQALVACLLVERVCVSDDMSRLTVYVVSRSFAERAAFQALAEEL
KEQLFGKRKVLVEIRERFQLGGDFTPEQLFGAYRESLLAELKSRSLIAARILERGTVRFP
SPEVLCCEVEDMPLNRRVVPDLKRYLEEEVFLGRCGIPMEFRADYVPYKRKELAEVPAET
LAIRNREEREEEGFFLSGEEGPDMQGENAETAFTAVSEKQTLSEEKAKAEKQKPDKTIKQ
TKHGDQKGNYRGEKREFTRKLRRSDNPDVLYGRDFEDNFIPISEITEVVGEVTIRGKVFE
LDVRYIEKSGSTLFIFSVTDFTDSITAKLFVRGEGEELDRLKSEIKVGSFLKLRGATTID
NRDGELILGSVNGMKKSESFEESKREDHAREKRVELHCHTKMSDLDAVNSAKDIIKQVKN
WGMEAVAITDHGNLQAFPEAWHAVSGDLQKNPKIIYGVEGYLVDDLKELVVAPGERTLDD
SFVVFDIETTGFSPRKSRIIEIGAVKVENGKIVDRFSQFVNPELPIPYRIEQLTGINDAM
VRNAPPIERVLPGFLAFCGDSAVVAHNAAFDTSFIRENAHAQGMEYAPTILDTVSLAHVL
LPKLNRYKLDTVAKALGVSLQNHHRAVDDAECTAGIFLKFIEMLKARGAHTLSEVAALGD
SSEALIRKMNSYHVIILAKNELGRVNLYRLVSDSHLKYYHKRPRIPKSELQRYREGLIIG
SACEAGELYQALLRDASDEEINRIASFYDYLEIQPIANNLFMLDSDRYTPDTEEDLRNLN
RRIVSIGEALQKPVVATCDVHFLNPEDEIYRRMIFFGNKYDDADRQPPLYFRTTEEMLRE
FAYLGAEKCEEVVIKNTQKIARMVERISPVRPDKCPPVIEHSDEKLTELCYGMAHAQYGD
PLPALVQERLDKELNSIIKNGFAVMYIIAHELVKHSNEEGYLVGSRGSVGSSFVAYTAGI
TEVNPLPPHYVCPNCRYSDFDSEIPKQFAGTAGCDMPDQVCPHCGAKMRKDGFDIPFETF
LGFKGDKEPDIDLNFSGENQSSAHAYTEVIFGKGQTFRAGTVGTLAEKTAFGYVKNYFEE
HGTRKRKCEINRLVQGCVGVRRTTGQHPGGIVVLPKGESIYSFTPLQHPANDMNTPIVTT
HFEYHAIDHNLLKLDILGHQDPTMIRKLQDLTQIDPVKDIPLDSPEVMSLFQSTEALGVK
SEDILGCQLGALGIPEFGTDFAMNMVIEAKPKGFSDLVRIAGLAHGTDVWQGNAQVLISE
GTATIQTAICTRDDIMLSLIQWGMDPQESFKIMESVRKGKGLTPEWEEHMREHEVPDWYI
WSCKKIKYMFPKAHAAAYVMMAWRIGYCKIFYPLAYYAAYFTIRATGFSYESMCQGKERL
EFLLAELGKRNYKGNRTNPLTPKEEDMIKDGRIAQEMYARGFSFLPIDLYRVSATQFTIV
DAKIMPALTSIDGLGESAAEQIVRAAAEGAFISKDDFRSRSGVGQTTCDLLDRLGILGKL
PESNQLSLFDFS
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttttgtgaagtatttccgcattttcaggcgacagcggcagaacaggcgctt
gtcgcctgcttgcttgtggagcgggtttgtgtttcggacgacatgtcacgtctcacggtc
tatgtggtgtctcgcagctttgcggagcgcgctgccttccaggcgctcgcggaggaactc
aaagaacagctcttcgggaagcgaaaggtgctggttgaaatccgagagcgctttcagctc
ggcggcgattttacgcccgagcagctgttcggtgcctaccgtgagagtctgctcgcggaa
ttgaagagccgctctctgattgcagcccgcatcttggagcgcggcaccgtgcgctttccg
agccccgaagtcctttgttgcgaagtggaagatatgcccttaaatcgccgcgtggtgccg
gacttaaagcgctacttggaagaagaggtttttctcgggcgctgcggtatccccatggaa
tttcgggctgactatgttccttataagagaaaagaacttgcggaagtgccggccgagacg
cttgcaatccgaaaccgggaagagcgtgaggaggagggctttttcctctcgggtgaggaa
ggccccgacatgcagggagagaacgcagaaacggcttttaccgcggtgagcgagaagcaa
acgctgagcgaagagaaggcaaaagcagaaaagcagaagcctgacaagacaataaagcag
acgaaacatggcgaccaaaaggggaactatcgcggggagaaacgggagttcacgcgcaag
ctgcgccgctccgacaatcccgatgtactctacggcagagattttgaggacaactttatt
ccgatttccgagattacggaggtcgtgggtgaggttacgatacgcggcaaagtatttgaa
ctcgatgtgcgctatatcgagaagagcgggagtacactcttcattttctctgtgaccgac
tttacggactccattacggcgaagctctttgtgcgcggggagggcgaagagctggaccgc
ctgaagagcgaaattaaggtggggagctttttaaagctgcgcggtgcaaccaccatagac
aatcgcgacggcgaattgattttgggctcggtgaacggcatgaagaagtccgagtctttt
gaggagagcaagcgagaagatcacgcgcgggaaaagcgggtggagctccactgccacaca
aagatgagcgatttggacgcggtaaacagcgcaaaggacatcatcaaacaggtcaaaaac
tggggcatggaggcggttgcgattaccgatcacggcaatctgcaggcctttccggaggct
tggcatgccgtttccggagatttacagaagaacccgaagataatctacggcgtagagggc
tatttggtcgatgacttaaaagaactcgtggttgcgccgggcgagcgaacgctcgatgac
agcttcgtggtctttgatattgagaccaccggtttctcgccgcgaaagagccgcatcata
gaaatcggtgcggtgaaggtggagaacggaaaaattgtggaccgtttttcgcaatttgtg
aatccggaactgccgattccctaccgcatcgagcagttgaccggaatcaatgacgcgatg
gtgcgaaacgccccgccgattgaacgggtgctgccgggctttcttgcgttttgcggcgat
tccgccgtggtcgcgcacaatgccgcgttcgatacgagttttatccgcgaaaacgcgcac
gcacagggcatggagtatgcgccgaccatactggacacagtgagtcttgcccacgtgctg
ctgccgaaattaaaccgttataagctggatacggttgcaaaggcgctcggtgtttccctg
cagaaccaccaccgcgcggtagacgatgccgagtgcacggcgggtatctttctcaagttt
atagagatgcttaaggcgcggggggcgcatacgctttctgaggtggcggcactcggggac
agttccgaggcgctgattcgcaagatgaacagctatcacgtgattatactcgcgaagaat
gagcttgggcgcgtgaacctgtaccgcctggtctcggactcccatctcaagtactaccat
aagcgccccagaataccgaagagtgaactgcaacgttatcgcgagggcttgatcatcggc
tccgcctgcgaggcgggcgaactctatcaggccttgctccgcgacgcttcggatgaggag
attaaccgcattgcttccttctacgattatctggagatacagccgattgcgaacaatctt
ttcatgttggacagcgaccgctacacgcccgataccgaagaggatttgaggaacttaaac
cgacgcattgtgtccatcggcgaggcactgcaaaagccggtcgttgcgacctgcgacgtt
cactttttaaaccccgaagatgagatataccgtcgcatgatttttttcggcaacaaatat
gacgatgccgatcggcagccgccgctctattttcgaacgacggaggaaatgctgcgcgag
tttgcctatctcggcgcggaaaagtgcgaggaagtcgtcatcaaaaatacgcagaaaatc
gcacgcatggtggagcgcatctccccggtgcggcccgacaagtgcccgcccgtcattgag
cattcggatgaaaaactgacggagctctgctacggcatggcgcatgcgcagtacggggat
ccgctgccggctcttgtgcaggagagacttgacaaagagttgaattccatcattaagaac
gggtttgccgtcatgtacatcatcgcccacgaactcgtgaagcactcgaacgaagagggc
tatctcgtgggctcccgcggctcggtcggttcctcctttgtcgcctatacggccggcatt
accgaggtgaatcccctgccgccgcattatgtatgcccgaattgccgctactcggacttc
gactcggaaattccgaagcagtttgcgggcaccgcgggctgcgacatgccggatcaagtc
tgcccgcactgcggcgcaaaaatgagaaaagacggctttgatattccctttgagaccttc
ctcggctttaagggagacaaagagccggatatcgacctgaacttttcgggtgagaaccag
agctcggcgcacgcctatacggaggtcatcttcggaaaagggcagacgttccgcgcaggc
acagtaggcaccttggcggaaaagacggccttcggctatgtgaaaaactactttgaggag
cacgggaccagaaagcgaaagtgcgagattaaccgccttgtgcaaggctgtgtcggtgtg
cggcgcaccacgggacagcatccgggcggcattgtcgtcttgccgaagggcgagtcgatt
tactcctttacgcccctgcaacacccggcgaacgatatgaacacgccgatcgtcacgaca
cacttcgagtatcacgcgatcgaccacaatcttttgaaactggatatcctgggtcaccag
gacccgaccatgatacgcaaactacaggatttgacgcagatcgatccggtcaaagacata
ccgctcgattcccccgaggtgatgagtcttttccagagcaccgaggcactcggtgtcaag
tcggaggatattctcggctgtcagctcggcgcgctcggcattcccgagttcggcaccgat
ttcgcgatgaacatggtcattgaggccaagccgaagggcttttccgacctggttcgcatt
gcggggcttgcacacggcaccgatgtctggcagggcaatgcgcaggtgctcatttccgag
ggcacggcgaccattcagaccgctatttgtacgcgagacgacatcatgctctcgctgatt
cagtggggcatggatccgcaggagagctttaaaatcatggagtcggtccgcaaaggcaag
ggactcacgccggagtgggaagaacacatgcgggagcacgaggtgccggactggtatatc
tggtcctgcaaaaaaatcaagtacatgttcccgaaggcacatgcggctgcctatgtcatg
atggcctggcgcatcggctactgcaaaatcttttacccgcttgcttactatgcagcctac
tttacgatacgcgcgaccggtttcagttacgagagcatgtgtcagggcaaggagcggctt
gagttcctgcttgcggagctcggcaaacggaattacaagggaaaccgaacgaacccgttg
accccgaaggaagaggatatgattaaggatgggagaatcgcgcaggagatgtatgcgcgc
ggcttttcgttcctgccgatcgatctataccgcgtcagcgcgacacaatttaccattgtc
gacgcgaaaattatgccggcgctcacctcgatcgacggactcggggagagtgcggcggag
caaattgtgcgggcggcggccgagggtgcgttcatttcgaaagacgacttccgttcccgg
agcggcgtcggacaaaccacctgcgatctgctcgaccggctcggcatactcggaaaactg
ccggaatcgaaccagctctcgctctttgatttcagctga
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