Stomatobaculum sp. F0698: QU660_04185
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Entry
QU660_04185 CDS
T09252
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03030
DNA replication
stom03410
Base excision repair
stom03420
Nucleotide excision repair
stom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QU660_04185 (polA)
03410 Base excision repair
QU660_04185 (polA)
03420 Nucleotide excision repair
QU660_04185 (polA)
03440 Homologous recombination
QU660_04185 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stom03032
]
QU660_04185 (polA)
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_04185 (polA)
Enzymes [BR:
stom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QU660_04185 (polA)
DNA replication proteins [BR:
stom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QU660_04185 (polA)
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QU660_04185 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QU660_04185 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
DUF2161
Motif
Other DBs
NCBI-ProteinID:
WLD87513
LinkDB
All DBs
Position
885804..888452
Genome browser
AA seq
882 aa
AA seq
DB search
METRKKVVLIDGHSILNRAFYGVPELTNSAGLHTNAVYGFLNILLKLLEEERADYLAVAF
DLPAPTFRHERYADYKGTRKSMPDELREQVPLLKELLAAMNIKTVSLAGYEADDVIGTLA
KRYQKEGLEVTVVSGDRDLLQLADSHILIRLPKTSRGKTEILDFTPAAVKEAYGVTPEEF
IDVKGLMGDSSDNIPGVPSIGEKTATALIQSWHSIENLKEHLEEVKPPRAKKALEEHFED
AVFSKWLATICLDAPLTLDLSELALGELYTSEAYEQIQRLEFRSLLKHFGSEVQREHMRA
QHRPRIELIQTEEALREAAERAVKAGEIGIARGELLTAFCSDAERVSVLLRREPEAGERE
QLKALTEQSGGMVLDAAAEKKLLSELFARAKTVSALDLKPLLKEVGSEERDTVDDLGVLA
YLLNPLKESYRSEDIARDYLSLLLPSAKEDAFAAEAYEAYVAFAARKPLREKVSEQGMEK
LYSEIERPLVFMLAEMEENGVAVDAEKLKAFSEELEREIQGIEAEIYAETGEEFNLNSPK
QLGEILFEKMKLPYGKKTKSGYSTAADILEKLAPEYPVVKKILRYRMLTKLNSTYALGLA
AYIQADGRIHGTFHQTITATGRISSANPNLQNIPIRTEMGSRVRSVFVPAPGKVFVDADY
SQIELRILAALSGDENLIAAYRDAVDVHAVTASQVFHVPLAEVTPLQRRNAKAVNFGVVY
GISAFGLSEDLSISRNEAKEYINRYFESYPEVKRFLDRQIKEAKEYGFTRTLFGRIRPVP
ELKSSNFMQRAFGERVAMNAPIQGTAADIMKIAMVKVRRALKREKLDARIVLQIHDELLV
EADEKVAARVLELLKETMRNAAELRVSLEVDAHIGNSWLEAH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacaagaaaaaaagtagtactgattgacggacacagcattttaaaccgcgccttt
tacggcgtgccggagctcacgaactcggcgggactgcacaccaacgcggtctacggcttt
ttgaatatcttactgaaactgctcgaggaagagagagcagactacctcgcggtcgccttt
gacctgcccgcgcctaccttccgccacgagcgctatgcggattacaagggaaccagaaag
tccatgccggatgagctgcgggagcaggtaccgctcttaaaggaattgctggcggccatg
aatattaagaccgtgtcgcttgcgggctacgaggcggacgatgtgatcggcaccctcgcg
aagcgctaccagaaggaagggctcgaggtcacggtggtctcgggagaccgggatcttttg
cagctcgcggatagccacattttgatacgcctgccgaagaccagccgcggaaagaccgaa
atcctggactttacgcccgccgccgtcaaggaggcttacggggtgacgccggaggagttt
attgacgtcaagggactgatgggtgacagctccgacaatattccgggcgtcccctcaatc
ggtgagaaaacggcgaccgctctgattcagagctggcattcgattgagaacctgaaggaa
catctggaggaagtgaagccgccgcgtgccaagaaggcgctcgaagagcatttcgaggac
gcggttttttcaaagtggctcgcgaccatatgcttggatgcgccgctcaccctggatctc
tcggagctggcgctcggggagctctacacgagcgaggcctacgagcagattcagcgcctt
gagttccgctcgcttttaaagcacttcggcagtgaggtgcagcgggaacacatgcgcgcg
cagcatcgcccgcggattgaactcatacagacggaagaggcactgcgggaggcggcagag
cgcgccgtaaaggctggtgaaatcggtattgcacgaggagagcttctcaccgcgttctgc
agcgatgcggagcgtgtatccgttttgctccgtcgggaaccggaggcgggagagcgcgaa
caactgaaggcgcttacggagcagagcggggggatggttttggatgctgcggcagagaaa
aagctcctctcggagctctttgcccgtgcaaagacagtgtccgctctcgatcttaagccg
ctcttaaaagaagtgggcagcgaggagcgggatacggtcgatgacctcggcgtgcttgcc
tacctcttaaatcccctgaaggagagctatcgcagcgaggacatcgcgcgggattacctc
tccctgctcttgccgagtgccaaggaagatgcgttcgcggccgaggcctatgaggcctat
gtcgcctttgcggcgcggaaaccgcttcgggaaaaggtaagcgaacagggcatggagaaa
ctgtattcggagattgagcgcccgctcgttttcatgctcgcggaaatggaagagaacggc
gtcgcggtcgatgccgaaaaattaaaagccttttcggaggaactggagagagaaattcag
ggaatcgaggccgagatctacgcggaaaccggagaagaattcaatctgaattcgccgaaa
caactcggggaaatattgtttgaaaagatgaagctcccctatggaaaaaagaccaagagc
ggttattcgacggccgcggatattttggagaaacttgctccggaatatccggtggttaag
aaaatactccgctaccgcatgctcacaaagctgaactcgacctatgcgctggggcttgcc
gcctatattcaggcggacggcagaattcacggaaccttccaccagaccatcacggcgacg
ggacgcatttcttcggccaatccgaatttacagaatattccgatacggactgagatggga
agccgtgttcgctctgtctttgtgccggcccccggcaaggtttttgtggacgcggactac
tcgcagatcgagctccgcattcttgcggcgctctcgggcgatgagaatctgattgcggcc
tatcgcgacgcggtcgatgttcacgctgtcacggcctctcaggtctttcatgtgccgctt
gccgaggtcacgccgctccagcgccgcaacgcgaaggcggtcaacttcggtgtggtctac
ggtatttcggccttcggcctctcggaggacttaagcatctctcggaatgaggcgaaggag
tatatcaaccgttatttcgagagctatcccgaggtaaagcgtttcctggatcgccaaatt
aaagaggcgaaggaatacggctttacgcggacacttttcggcagaatacggccggtgccg
gagttaaagagctccaatttcatgcagcgcgccttcggagagcgcgtcgccatgaatgcg
ccgattcagggcacggcggccgatatcatgaagatcgcgatggtcaaggtgcggcgcgcc
ctcaagagagaaaaactggatgcgcgcattgtgctccagattcacgatgagcttttggtg
gaggcggatgagaaagtcgcagcacgcgttctggaactcctgaaagagaccatgcggaat
gccgcggaacttcgtgtatcccttgaggtggatgcgcacatcggcaactcttggctggag
gcacactga
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