Stomatobaculum sp. F0698: QU660_08320
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Entry
QU660_08320 CDS
T09252
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QU660_08320 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_08320 (uvrB)
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QU660_08320 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QU660_08320 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
SWI2_SNF2
Kinesin
AAA_16
Peptidase_S9_N
AAA
Microtub_bd
UB2H
AAA_33
AAA_25
AAA_7
DUF87
NPHP3_N
VBS_C3G9
Motif
Other DBs
NCBI-ProteinID:
WLD86484
LinkDB
All DBs
Position
complement(1824147..1826213)
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AA seq
688 aa
AA seq
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MKFELHSEFQPTGDQPQAIRQLVEGFREGNQFETLVGVTGSGKTFTMANVIQELQKPTLI
ISHNKTLAAQLYSEMKEFFPKNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAATNEEIDRL
RNSATSALLEREDVIVVASVSCIYGLGSPTDYKNMMVSLRPGQEKDRDEVIAELINIQYS
RNDLDFHRGTFRVRGDVIEIFPADQDKLAYRVEFFGDEIDKITETDVLTGNPLAEVLHIS
IYPANHYVVPREKIERAAREILAECEDYVKLLKSEDKLLEAQRIEERTHYDVEMLRETGF
CSGIENYTRFLTEQKPGEPPFTLIDYFPKDFLTIVDESHITISQIGGMFNGNFARKSTLV
KYGFRLPSSMDNRPLNFTEFEERMNQMLFVSATPSRYEAEHELLRAEQLIRPTGLLDPEI
SVRPVEGQIDDLLCEINKEIEKKNKVLVTTLTKRMAEDLTSYLREVGVRVRYLHSDIDTL
ERAQIIRAMRLDEFDVLVGINLLREGLDIPEISLVAILDADKEGFLRSETSLVQTIGRAA
RNAEGHVIMYADNMTDSMRRAISETERRRTIQEAYNKAHGITPTTIKKAVRDVIMMTKAV
IADQKHWDKDPESMSDEELRRLSKELEKKMRQAAAELNFEEAARLRDRMGEVLRLRSDPE
SREKAAEVQRAVAGKFEKPAEHKRNRRG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaactgcacagcgagtttcagccgacgggagaccagccgcaggccatacgg
caactggtcgaaggctttcgggagggcaatcagtttgagacgctggtcggcgtgacgggt
tccggtaagaccttcacgatggcaaatgtgattcaagagttgcagaagccgacgctcatc
atctcccacaataagacgctcgcggcgcagctttacagcgagatgaaggagttcttcccg
aagaatgcggtggagtactttgtctcctactacgactactaccagccggaggcctatgtg
ccgcagacggacacctacatcgagaaggatgccgcgaccaacgaagagatagaccggctg
cgaaattcggcgacgagcgcccttctcgagcgggaggatgtgattgttgtcgcgagtgtc
tcctgcatttacggcctcggcagcccgacggactataaaaacatgatggtcagtctgcgc
ccgggacaggagaaggatagggatgaggtcatcgccgagctcatcaatatccagtacagc
cgaaatgacctcgactttcaccgcggcaccttccgtgtgcgcggcgacgtgatagagatt
tttccggcggatcaggataagcttgcctaccgcgtggagttcttcggcgacgagatcgat
aaaatcacggagacagatgtgctgaccggaaacccgcttgcggaggtgcttcacatttcg
atttacccggcgaaccactacgtggtgccgcgcgaaaagatcgagcgtgcggcccgggag
atactcgccgaatgcgaggactatgtgaagctcttaaagagcgaggataagctccttgag
gcgcagcgcattgaagagcggacgcactacgatgtcgagatgttaagggaaacgggtttt
tgctccggcattgagaactacacccgctttttgacggagcagaagccgggcgaaccgccg
tttaccttgattgactattttccgaaggactttctcacgattgtcgacgagagccacatc
acgatatcgcaaatcggcggcatgtttaacggcaactttgcgcgaaagtcaacgttagta
aagtacggcttccgcctgccgagttccatggacaaccgtcccctgaactttacggagttc
gaggagcgcatgaaccagatgctctttgtctcggcgacaccgagtcgctacgaggcggag
cacgagctgcttcgcgcggaacagctgatacgtccgaccggtcttctggaccccgaaatt
tcggtgcgcccggtcgagggccagattgacgatttgctctgcgaaatcaacaaagagatt
gagaagaagaataaggtcctggtcacaacactcaccaagcgcatggcggaggacttaaca
agctacctccgggaggtcggtgtgcgggtgcgctatctgcactcggacattgacactttg
gagcgcgcgcagatcatccgcgccatgcgcctcgatgagttcgatgtgcttgtcggcatc
aatctgctccgcgagggtcttgatatcccggagatttctttggtcgcgattctggatgcc
gacaaggagggcttcctgcgctcggagacctcgctcgtgcagaccataggccgtgcggcg
agaaatgccgaggggcacgtgattatgtatgccgataacatgacggactccatgcgccgc
gccatttcggagacagagcgccgccgcacgattcaggaggcttacaacaaggcacacggc
atcacaccgaccaccatcaaaaaggcggttcgagatgtgattatgatgaccaaagccgtc
attgcggaccaaaagcactgggacaaggatccggagtccatgagcgacgaggaactgcgt
cgtctctcgaaggagctcgagaagaagatgcgccaggcggcggccgaactcaacttcgag
gaggcagcgcgactcagagaccgcatgggagaggtactgcgccttcgcagcgaccccgag
agccgggagaaagcggccgaggtacagcgcgccgtcgcgggtaaattcgagaaacctgcg
gagcataagcgcaatcggcggggctaa
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