Stomatobaculum sp. F0698: QU660_09295
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Entry
QU660_09295 CDS
T09252
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
stom
Stomatobaculum sp. F0698
Pathway
stom03030
DNA replication
stom03430
Mismatch repair
stom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QU660_09295 (holB)
03430 Mismatch repair
QU660_09295 (holB)
03440 Homologous recombination
QU660_09295 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stom03032
]
QU660_09295 (holB)
03400 DNA repair and recombination proteins [BR:
stom03400
]
QU660_09295 (holB)
Enzymes [BR:
stom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QU660_09295 (holB)
DNA replication proteins [BR:
stom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QU660_09295 (holB)
DNA repair and recombination proteins [BR:
stom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QU660_09295 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
Mg_chelatase
AAA_16
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
WLD86663
LinkDB
All DBs
Position
complement(2052992..2053975)
Genome browser
AA seq
327 aa
AA seq
DB search
MCDFRDILGQEHIKQRLEQSIRRDQLSHSYLFLGEKGMGKQVMARAFAKRLLCTGEGTRP
CGHCHSCIQLAADTHPDVITISRDKTTLGVDRVREQLSQEIRIRPFSGERRIFIIPEAEK
MTQQAQNAILKTIEEPPTYAIIILLAEQEEALLPTIRSRVLRLSFRPVPESEILERLLGK
GADGKRAKEAARFSRGIYRRAEELALSEEAYARYRRTLDLLRALPKCGETVFHRAQTEIT
ELYPEPRDFLSFLRLYYRDVLCVKSGGSSAALIFPQEEEALIREAKDLSYEQAGVILKET
EAAEERFRLNVNKELSAELLLLAIRRE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgattttcgtgacatactcggccaggaacatatcaaacagagactagaacagagc
ataaggcgcgatcagctctcccacagctacttgtttctcggtgagaagggaatgggaaag
caggtcatggcgcgcgcgtttgcaaagcgtttactctgtaccggggagggaacgcgcccc
tgcggtcactgccacagctgtattcagctcgcggcagatacgcatccggacgtcatcaca
atcagtcgggataaaacgaccttgggtgtggatcgggtgagagagcagctctcacaggaa
atacggatacggccgttttcgggtgagaggcgcattttcattattccggaagcggagaaa
atgacccagcaggctcaaaatgcgattctaaagaccatagaggagccgccgacatatgcg
attatcattctgctcgcagagcaggaggaagccttacttccgacgatacggagtcgtgtt
ttgcgactttcctttcgtccggttcccgagagcgaaattttagaacgtctgctcgggaag
ggggcggatggaaaacgcgccaaggaggcagcgcgtttttctcgcggcatttaccggagg
gccgaggaactggcgctctcggaagaggcctatgcgcgctatcgcaggacgcttgattta
ctcagagctttgccgaaatgcggcgaaacggtatttcacagggcgcagacagaaatcacg
gagctctacccggagccgcgtgattttttgagctttctccgcttgtactaccgcgatgta
ctctgcgtaaagagcggcgggagcagtgcggcgctcatcttcccgcaggaagaagaggca
ctgatacgggaggcaaaggacctgagttacgaacaggcaggtgtgattttaaaagagaca
gaggcagccgaggagcggttccgactcaatgtgaataaggaactttcagcggaactcctg
cttcttgcgatacggagggagtga
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