Sphaerospermopsis torques-reginae: K2F26_05835
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Entry
K2F26_05835 CDS
T09782
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stoq
Sphaerospermopsis torques-reginae
Pathway
stoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K2F26_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoq03019
]
K2F26_05835
03400 DNA repair and recombination proteins [BR:
stoq03400
]
K2F26_05835
Enzymes [BR:
stoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K2F26_05835
Messenger RNA biogenesis [BR:
stoq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K2F26_05835
DNA repair and recombination proteins [BR:
stoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K2F26_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QYX32867
LinkDB
All DBs
Position
1263668..1265113
Genome browser
AA seq
481 aa
AA seq
DB search
MNQPNNTSLTEIRTVLKQIWGYDDFRPPQGEIVNSLLSQKDALIIMPTGGGKSICFQLPA
LLKTGLTLVVSPLVALMENQVEELKQRNQKAALLHSELPTYQRRATLQALEKQQLRLLYL
SPETLFSPPVWERLSHPQLQINGLILDEAHCLVQWGDTFRPAYRRLGAVRPALLKTKPPG
TKISIAAFTATADPAAQKIIADVLQLQKPDSYKLNPYRANLHPSVKIAWTPKGRKQQLLK
FIQKYQNQAGLIYVRTRKDSEELAAWLTELGYNTASYHAGLGATERRAVEASWLNGKMPF
VVCTCAFGMGINKPDVRWVVHFHAPHLLSEYVQEIGRAGRDGKPAEALTLISEPTGFLDA
EDKQRQQFFEQQMLKQQQKAQHLAKKLPKQGEVTSVIKQFPDGATALSLLHSSGQLQWLD
PFHYKISAKSGSQPQMQLQAAKQMSEYLYSKKCRWQFLLDAFGFGKEAENWRCGHCDNCR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacccaataatacatcattaaccgaaattcgcaccgtattaaaacaaatctgg
ggttatgatgattttcgtcctccacagggagaaattgtcaacagtttattatcccaaaaa
gatgctttaattattatgcccacaggagggggaaaatccatttgttttcaacttcctgca
ctcttaaaaacaggattaactttagtagtttctcccttggttgcattgatggaaaaccaa
gttgaagaactcaaacaacgaaatcaaaaagctgcacttttacatagtgaactacctaca
tatcaacgtcgggcaacattgcaagctttagaaaaacaacaattaagattattatattta
tcaccagaaactttattcagtcctcctgtgtgggaaagattatctcatccccaattacaa
attaatggtttgatattagatgaagctcattgtttagtacaatggggtgatacatttcgt
ccagcttatcgacgtttgggtgctgtacgtccagctttattaaaaacaaaaccaccggga
acaaaaattagtatagcagcttttactgccactgctgatcctgctgcacaaaagataatt
gctgatgttttacagttacaaaaacctgatagttataaactcaatccttatcgtgctaat
ttacatcctagtgtgaaaattgcttggactccaaaagggagaaaacaacaattattaaaa
tttattcaaaagtatcaaaatcaagcaggtttgatttatgtgagaactcgtaaagatagc
gaagaattagcagcatggttaacagaattagggtataatactgctagttatcatgcgggt
ttaggtgctacagaaagacgcgcagtagaagcaagttggttaaatggaaaaatgccgttt
gttgtttgtacctgtgcttttggcatggggataaataagccagatgttcgttgggttgtt
cattttcatgcaccacatttattatcagaatatgtgcaggaaattggacgtgcgggaaga
gatggaaaaccagcggaagcgttaactttaataagtgaaccgacgggttttttagatgct
gaagataaacaaagacagcaattttttgaacaacagatgttgaaacaacaacaaaaagca
caacatttagcgaaaaagttaccaaaacaaggagaagtaacatctgtaattaaacaattt
cctgatggtgcaacggcgctttctttacttcatagtagcggacaactgcaatggcttgat
ccttttcattataagatttctgcaaagtcgggaagtcagccacaaatgcaattacaagct
gctaaacaaatgagtgaatatttgtatagtaaaaaatgtcgttggcaatttttgttagat
gcttttgggtttgggaaagaagcggaaaattggcgttgtggacattgtgataattgtcgg
aaatag
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