Sphaerospermopsis torques-reginae: K2F26_13690
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Entry
K2F26_13690 CDS
T09782
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stoq
Sphaerospermopsis torques-reginae
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stoq03032
]
K2F26_13690 (gyrB)
03400 DNA repair and recombination proteins [BR:
stoq03400
]
K2F26_13690 (gyrB)
Enzymes [BR:
stoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K2F26_13690 (gyrB)
DNA replication proteins [BR:
stoq03032
]
Prokaryotic type
DNA Topoisomerases
K2F26_13690 (gyrB)
DNA repair and recombination proteins [BR:
stoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K2F26_13690 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Intein_splicing
HATPase_c
Toprim
HATPase_c_3
TOPRIM_C
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QYX30021
LinkDB
All DBs
Position
2935082..2938324
Genome browser
AA seq
1080 aa
AA seq
DB search
MTSSYSADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV
DLNADGSCTVTDDGRGIPTDIHPKTGKSALETVLTVLHAGGKFGGGGYKVSGGLHGVGVS
VVNALSEVVDITVWRDKKVHNQRYERGIPMTELEAKPYKDSRTGTSVRFKPDAQIFTTGT
EFDYITLAGRLRELAYLNAGVKITFTDHRLEVLKSDTPKVETYQYNGGIKEYVAYMNREK
QPLHEEIIYVQGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKTVLTRT
LNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSL
VGEVLTEYLEFHPTVADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSS
RDPAESEIFLVEGDSAGGCWHCDTVILLTDGRNITFKELIAEQEEGKEHYCYTVRDSGNI
GVEKIINVRMTKANAEVVKVTLDNGEVLICTPDHRFMLRDGTYKAAALLTPEDSLMPLYR
KISQKNERGQGLNGYEMVWNPLNDKWIYTHLLADFYNLEHGVYPYSDGSHRHHVDFNKRN
NDPTNIKRMTPDAHLELHRQHIEKTLHRPDVIEKSRQVHQSPEFRAFMSERMRDEKTRQI
LSAQAKAQWEDEAYKEFMTAKWREFYETNEDYRRENNELLNQAQQEYWGNEANRLAQSQR
VKEYFANNPQARQVLSELAKKQWEDEELRAWRSQKTKEQWTYEFREKRKRALQETYFDKT
IAVLKQLELQTGDIDVDSYETYRRFKKDKSLLRWDTFCERYYQGRPSVAKEAIRNYNHRV
VSVEKLEERYDVYDLEVPNTHNFALGAGIFVHNSAKQGRDRRTQAILPLRGKILNIEKTD
DAKIYKNNEVQSLITALGLGVKGEEFDASQLRYHRVVIMTDADVDGAHIRTLLLTFFYRY
QRALIEQGFIYIACPPLYKVERGKNHQYCYSDRELQQYIATLPANANYTIQRFKGLGEMM
PEQLWTTTMNPETRTLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagttacagtgccgatcagattcaagttctggaaggtctggaagccgtccgc
aaacgaccagggatgtatattggttccactggaccgcgaggactccaccatctagtttat
gaggtagttgataactctattgatgaagctttagcgggttactgtactcatgttgaggtg
gatctcaatgctgatggttcttgtacggtgacagatgatggtcggggtattcctaccgat
attcaccccaaaacaggtaagtcggctttggaaactgttttaactgtactacacgctggg
ggtaaatttggcggtggtggttacaaggtttcgggaggtttacacggtgtcggtgtctct
gttgttaatgctctctcggaagttgtagatattacggtttggcgggataaaaaggtacat
aaccaacgttatgaacggggtatcccgatgactgaactggaggcaaaaccatacaaggac
tcaagaacgggaacttctgtgaggtttaaaccagatgctcaaatttttactactggtact
gagtttgattacattacgttagcgggtcgtttgcgcgagttagcttatctcaatgcaggt
gtaaaaattacttttacggatcatcgtttagaagttctcaaaagcgatactcccaaggta
gaaacatatcaatataatggcggtataaaagaatatgtcgcctacatgaaccgggaaaaa
caacctttacacgaagaaattatttatgtacaaggggaacgaaataatgtacaggtggaa
gtctctctgcaatggtgtacagatgcttatactgataatgtcttaggttttgctaataat
atccgtactattgacggcggtactcatttagaaggtttaaaaacggttctcactagaact
ttaaatgcgatcgctcgcaagcggaataaaattaaagaaaatgaatctaatcttagtggt
gaacacgtccgcgaaggtttaactgctgttatttctgtgaaagtccctgatcctgagttt
gaaggacaaactaaaactaaactcggtaatacggaagttcgcggtattgttgactctttg
gtgggggaagttctcacggagtacctagaatttcatcccactgttgctgattctatcctg
gataaagctattcaagcttttaaagccgcagaagcagcacggcacgcaagagagttagtt
agaagaaaatctgtattagaatcatctcctttacccggtaaattagcggattgtagctct
cgtgaccccgctgaatcggagatatttctcgtggaaggcgattcagcgggcggttgttgg
cattgcgacacagtaattttacttacggatggacgtaatattacgttcaaagaattgatt
gcagagcaggaagagggaaaagagcattactgttacacagtcagggatagcggcaatatt
ggggtagaaaaaatcatcaatgtccgcatgactaaggctaatgctgaagtagttaaagta
acattagataatggagaagttttaatctgtactcctgaccatcggtttatgttacgtgat
ggtacttacaaagcagcagctttacttactcctgaagattccttaatgcctttgtatcgc
aaaatatctcaaaaaaatgaacgcggtcaaggtcttaacgggtatgaaatggtttggaat
cctttaaatgataaatggatttacactcacctgttagcagatttttacaatcttgaacat
ggggtttatccttattctgatggtagtcatcgtcatcatgttgatttcaataaacgcaat
aatgaccccactaatattaaacggatgactcctgatgcacatttagaactgcatcgtcaa
catatcgaaaaaactctccatcgtcctgatgtgattgaaaagagtcgtcaagttcatcaa
agtcctgagtttcgcgcttttatgagcgaaagaatgcgtgacgaaaaaactcgtcaaatt
ctttccgcacaagctaaggctcaatgggaagatgaagcttataaggaatttatgacggct
aaatggcgggagttttatgaaactaatgaagactaccgccgggaaaataatgagttgtta
aatcaagcacaacaagaatattggggaaatgaagctaatagattggcgcaatctcaacga
gtgaaggaatattttgctaataatcctcaagcgcgtcaagtattatcagagttagctaaa
aaacaatgggaggacgaagaattacgggcttggcgcagtcagaaaactaaggaacaatgg
acctatgagtttcgggaaaaacgcaaaagagctttacaagaaacatattttgataagact
attgccgttttgaagcaattagaactgcaaactggtgatatagatgtagacagttatgaa
acttatcgcagatttaagaaagataaatctttactacgctgggatacgttttgtgaacgt
tattatcaaggtcggccatctgtagctaaagaagcaataagaaactataatcaccgtgtg
gtgagtgtggaaaaactagaagaacgctatgatgtctatgatctggaagttcccaatact
cataactttgctttaggggcgggaatttttgtgcataatagcgccaaacaaggacgcgat
cgccgaactcaagctatcctgcccctacgtggtaaaattctcaacattgaaaaaaccgac
gacgcaaaaatctacaaaaacaacgaagttcaatctttaatcacagcattgggtttaggc
gtaaaaggtgaagaatttgatgcctcacaattacgctatcatcgtgtagtaattatgact
gatgctgacgtagatggggcgcacattcggactttgttgttaacgtttttctatcgttat
caaagggcgttaattgaacaagggttcatctatattgcttgtccaccactgtataaagta
gaaagaggcaaaaatcaccagtattgttacagcgatcgggaattacaacaatatattgcc
actttacctgccaatgctaactataccattcagcgttttaaaggtttaggggaaatgatg
ccggaacaactgtggacaaccacaatgaacccagaaacccggacgctgaaacaagtggaa
atagaagacgcagcggaagcagatcggatatttaccattttaatgggcgatcgcgttgca
cccagacgggagtttattgaaacctatggttctaaactaaacctcaccgatctagatatc
taa
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