Sphaerospermopsis torques-reginae: K2F26_16780
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Entry
K2F26_16780 CDS
T09782
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
stoq
Sphaerospermopsis torques-reginae
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stoq03021
]
K2F26_16780
Transcription machinery [BR:
stoq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K2F26_16780
BRITE hierarchy
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
DUF2316
Motif
Other DBs
NCBI-ProteinID:
QYX30538
LinkDB
All DBs
Position
complement(3604242..3605225)
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AA seq
327 aa
AA seq
DB search
MPTVNNETENLNAKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMTLLEGKEALAK
KLDHEPSLAEWAAHVNQSENEVKHTVALGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQKLGRSPTPTEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNNLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacaacgaaactgaaaacctgaatgccaaattcacggctgatatggtg
cgaacctatctgcgggaaattggccgtgtgccactactaacccgtgagcaagagattgtt
tatgggaagcaagtgcagcaaatgatgacgctgcttgaaggtaaagaagctttagcgaaa
aaactagaccatgaacctagtttagcagaatgggctgcccatgttaaccaatcagaaaat
gaagttaaacatacggtggcgttaggtaagcgagccaagcaaaaaatgattgaagcgaat
ttgcgcttggttgtggcgatcgccaaaaaataccagaaacgaaacatggaatttctggat
ttgatccaggaaggaacattaggtttagaacggggggtagagaaatttgatcccatgcgg
ggttataaattctcgacttatgcttactggtggattcggcaagcgattacacgagcgatc
gctcaacaaggtcgcactatccgcttacctatccatattaccgaaaagctgaacaaaatt
aaaaaggtgcaacgggagttggcgcaaaagttgggcaggtctccaacaccaacagaaatc
gccaaagaactggaattagaacctgctcagattcgtgaatatctgaatatggcacgtcaa
ccagtttctttagatgtgcgggttggtgataaccaagacaccgaactgcaagaaatgttg
gaagatgaaggtccatctccagagtattacaccactcaggaatttttgcgccaagactta
aataacctgttggcagaactcacaccccaacaacgggaagttttagctttacggtttggt
ttagaagatggtaatgaaatgtccttggcgaaagttggtgaacggttgaaccttagccgt
gagcgagtccgtcaactagaacatcaagcacttgcacatttacgccgtcgtcgcgccaat
gttaaagaatacgttgccagctaa
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