Sphaerospermopsis torques-reginae: K2F26_17395
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Entry
K2F26_17395 CDS
T09782
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stoq
Sphaerospermopsis torques-reginae
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stoq03021
]
K2F26_17395
Transcription machinery [BR:
stoq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K2F26_17395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_8
HTH_17
Sigma70_ECF
HTH_23
HTH_3
KORA
GerE
Tri-helical
HTH_31
HTH_24
HTH_Tnp_ISL3
HTH_11
DUF1492
HTH_Tnp_1_2
Xre-like-HTH
HTH_50
HTH_37
HTH_28
HTH_30
DUF134
Motif
Other DBs
NCBI-ProteinID:
QYX30644
UniProt:
A0ABX8WW43
LinkDB
All DBs
Position
complement(3737729..3738505)
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AA seq
258 aa
AA seq
DB search
MPNTATNELKHEISQLLREYEQCPSERLRNQLVKLNFGLVRKEAHYWINQSHESYEDLIQ
VGCLGLIRAIEKFELSKGHAFSSYAIPYIRGEIQHYLRDKGVTIRIPRRWLALQQQAIGV
SRSLREKYNRQPTDAEIAGALEISQSEWQEIKLAWVNCSPLSLDVPIQDGEEGSTSLGEL
VPDPNYRSFQLAQEDQIRLKQALVQLENRTREVLECVFLHDLTQKQVAEHLGISVVTVAR
KVKKGLEMLKTIMVVPEN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatacagccacgaacgaactaaaacatgagatttcacagttgttgcgagaatat
gagcaatgtccttcagaacgccttcgtaatcaactggtgaaactaaattttggactggtg
agaaaagaagctcactactggataaatcaatctcatgaaagctatgaagatttgatccaa
gtcggctgtttgggtttaattagagctattgagaaatttgaactttctaaagggcacgcc
tttagttcttacgctattccttacattcgcggggaaattcaacattacctccgggacaaa
ggcgtaaccatacggataccccggcgctggttagcactgcaacagcaagccataggtgtt
tcccgttctttgcgggaaaaatacaaccgccaaccgactgatgcagaaatagctggtgca
ttggaaatttctcaaagtgaatggcaggaaattaaattagcatgggtgaattgctctccc
ctgagtttggatgtacccatacaggatggagaagaaggatctaccagtttgggggaattg
gttcccgatcccaattaccgcagctttcaattagcgcaagaagaccaaatcagattaaaa
caagcattagtacagttggaaaaccgcacccgggaagttttagaatgcgtgtttttacat
gatttgacacagaagcaagttgcagaacatttaggaattagtgtagttactgttgctcgt
aaagtcaaaaaaggactggagatgctgaaaacaatcatggtagtgcctgaaaattaa
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integrated database retrieval system
