KEGG   Sphaerospermopsis torques-reginae: K2F26_20515
Entry
K2F26_20515       CDS       T09782                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
stoq  Sphaerospermopsis torques-reginae
Pathway
stoq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:stoq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K2F26_20515 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stoq03400]
    K2F26_20515 (uvrA)
DNA repair and recombination proteins [BR:stoq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K2F26_20515 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      K2F26_20515 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind SMC_N AAA_29 AAA_16 RsgA_GTPase nSTAND1 AAA_21 AAA_33 nSTAND3 AAA_23 AAA_22 AAA_25 NACHT Viral_helicase1 AAA_18 DnaJ_CXXCXGXG MeaB cobW BCA_ABC_TP_C GDH_HM1
Other DBs
NCBI-ProteinID: QYX31195
LinkDB
Position
complement(4390959..4393919)
AA seq 986 aa
MSEHLATTLSDRLPYPQNSQKNQQNTIRIRGARQHNLKNIDLELPRDQLIVFTGVSGSGK
SSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVESIEGLSPAISIDQKSTSHNPRST
VGTVTEIYDYLRLLYGRAGEPHCPHCDRSISPQTIDEMCDRILALPDRTRFQILAPVVRG
KKGTHRKLISSLAAQGFVRIRVDGEVLELSDSIELDKNITHNIELVIDRLVKKDGIQERL
VDSLTTCLKQSHGIAAIEVLNDTSNKVAQERQHSKYIGNGEESQGISEQELPTEMVFSEN
FACPEHGAVMEELSPRLFSFNSPYGACSHCHGIGTLRRFSEELLIPNPEAPIYAAIAPWS
EKENSYYLELLYTLGLDYGFELQTQWKNLTREQQQIVLFGEEKRTTETQRKQSFKGVIPI
LQRQYEGGTELVKQKLEEFLIDQPCEVCGGKRLKPEALAVKLGQYGILDLTSVSIRECRE
RVENLQLSPRQMQIADLVLREVKARLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQI
GSGLTGVLYVLDEPSIGLHQRDNGRLLKTLTKLRDLGNTLIVVEHDEETIREADHIVDIG
PGAGIHGGNIIAQGNIEDLLNAEASLTGAYLSGKRVIHTPGTRREGNGRSLRIKNAHRNN
LKNIDVEIPLGKLVAVTGVSGSGKSTLIHELLYPALQHHLLKRVPLPKEIEEIKGLNCVD
KAIVIDQSPIGRTPRSNPATYTGVFDVIRDVFSQTIEAKTRGYKPGQFSFNVKGGRCEAC
SGQGVNVIEMNFLPDVYVQCEVCKGARYNRETLQVKYKEKSISDVLNMTVEEALAFCENI
PKAVTRLQTLVDVGLGYVQLGQPATTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGL
SFYDVHKLLDVLQRLVDKGNSILVIEHNLDVIRCADWVIDLGPEGGDKGGEIIAAGTPEQ
IAENPHSHTGKYLQQVLKQYPPQNPL
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgtcagaacacctagcaacaactttaagcgatcgccttccctatccccaaaatagccaa
aaaaaccagcaaaatactattcgtattcggggcgctaggcagcataatctcaaaaatatt
gatttggaattaccccgcgatcagttaattgtgtttactggtgtttctggttcgggtaag
tcttctttggcctttgataccatttttgcagaaggtcaacggcgttatgtggaatctctg
agtgcttatgctcggcaatttttgggtcagttggataaacccgatgtggaatctatcgag
ggtttaagtcctgctatttccattgaccaaaaatcaacttcccacaacccccgttctaca
gtgggaacagtcacggaaatttatgattatctgcggttgctttatggccgtgctggtgaa
ccccattgtcctcactgcgatcgctctatttccccccaaaccattgacgaaatgtgcgat
cgcatccttgcacttcctgaccgcacccgtttccaaattcttgcaccggttgtccggggg
aaaaagggtactcaccgcaaactcatttctagtttagccgctcaaggttttgttcggatc
agggtggatggagaggtgttagaactctcagattctattgaattggataaaaatattaca
cataatatagaactggttattgacaggctcgttaaaaaagacggtatacaagaacgtttg
gttgattctctcaccacctgcctcaagcaatctcacggaattgctgcaattgaggtatta
aatgatacatcaaataaagtagcgcaggagcgacaacatagtaagtatataggaaatggg
gaggaaagtcaaggtatttccgaacaagaattacccacagaaatggtattttcagaaaac
tttgcttgtccagaacatggtgcggtaatggaagaattatcaccccgtttgttttctttt
aattctccctatggtgcttgttctcactgtcatggaattggcactttaagaaggttttct
gaggagttattgatacctaatcccgaagcaccgatttatgcagcgatcgcaccttggtca
gaaaaggaaaattcctattatttagagttattatatactttagggttagattatggattt
gagttacaaactcaatggaagaacttaaccagagaacagcaacaaatagttttatttggg
gaagagaaacgaaccacagagacacagagaaagcagagttttaaaggtgtaattcccatt
ttgcaacggcaatatgagggaggaacggagttagttaagcagaagttagaggaattttta
atagatcaaccttgtgaagtttgtggagggaaaagattaaagccggaagctttagctgtg
aagttaggacaatatggaattttagatttaacgagtgtgtcaattcgggaatgtcgggag
agggtagaaaatttgcaattaagtccccgacaaatgcaaattgctgatttagttttacgg
gaagttaaagctagattacaatttttattagatgtaggtttggattatttaaccttagat
cgtccggcaatgacattatcaggaggagaagcacaaagaattagattagctacacaaatc
ggttctggtttaacaggagttctttatgttttagacgaaccaagtatcggtttgcatcaa
agagataacggaagattgttgaaaactttaaccaaattacgagatttaggaaatacatta
atagttgttgaacatgatgaagaaactattcgggaagcagatcatatagttgatattgga
cccggtgctggtattcatgggggaaatattattgcacagggaaatatagaagacttatta
aatgcagaagcatcattaacaggtgcttacctatcaggaaaaagagtaattcatacccct
ggaacaagaagagaaggaaacggtagaagtttaagaataaaaaacgcccatcgtaacaac
ttaaaaaacatagatgtagaaattcccttaggaaaactggttgctgtgactggagtttct
ggttcaggaaaatcaacattaatccacgaattactatatccagcattacaacatcatctt
ttaaaaagagtaccacttcccaaagaaatcgaagaaataaaaggattaaactgtgtagat
aaagccatagttatagatcaatcacccataggcagaacacccagatcaaaccctgcaacc
tacacaggagtttttgatgtcattagagatgtattttcccaaaccatcgaagctaaaacc
agaggatataaaccaggacaattttccttcaacgtcaaaggtggcagatgtgaagcgtgt
agtggacaaggagtaaacgtcatagaaatgaactttttaccagacgtttatgtacaatgc
gaagtttgtaaaggagcaagatataaccgcgaaaccctacaagtgaaatacaaagaaaaa
tcaatttccgacgttttaaacatgaccgttgaagaagcattagcattttgtgaaaacatt
cccaaagcagtcaccagattacaaacattagtagacgtaggattaggatatgtacaacta
ggacaaccagccaccacattatcaggaggagaagcgcaacgggtgaaattagcaacagaa
ttatctcgacgcgcaaccggaaaaacattatatttaatagacgaaccaacaaccgggttg
tctttttacgacgttcataaattattagacgttctccaaagattagtagacaaaggaaac
tcaattttagtaatagaacataacttagacgttattcgttgtgcagattgggtaatagac
ttaggaccagaaggaggagacaaaggaggagaaataatagcagcaggaacaccagaacaa
atagcagaaaacccccattcccacacaggaaaatatctgcaacaagtattaaaacaatac
ccaccccaaaaccctctttaa

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