Sphaerospermopsis torques-reginae: K2F26_24235
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Entry
K2F26_24235 CDS
T09782
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stoq
Sphaerospermopsis torques-reginae
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stoq03016
]
K2F26_24235
Enzymes [BR:
stoq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K2F26_24235
Transfer RNA biogenesis [BR:
stoq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K2F26_24235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Phage_SSB
VCIP135_N
Motif
Other DBs
NCBI-ProteinID:
QYX31831
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All DBs
Position
5204598..5205521
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AA seq
307 aa
AA seq
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MPYLTTAAEIRSQIAKYTKAKTLWIDTEVADYKSRNPRLSLIQILDHPQDMTGDSVYILD
VLNKSDVIAAFIEQIMINESIEKVFHNASYDLKLLGNKKAKNITCTLEMAKSIPYHILPL
PNYQLKTLANVLCNFYGIDKQEQGSDWGIRPLSDDQLEYAYFDCIYLAQVHSKLLALQSQ
VTTNPETEDLSLLSQRYTEVEQQKKLINSEFDYLQERLKKAMQVQNISETEYCKLSGYER
KSVKVKFTELVRLVENEDIDLDFPITLTEKLQKELGRNLEQLDVDIEKSSVWRLIVKSQE
EDVNNDE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccttatcttactactgctgcggaaatccgttctcaaattgctaaatataccaaagct
aaaactttgtggatagatacagaagttgctgattataaaagtcgtaatcctcgattatcc
ctgattcaaatattggatcatcctcaagatatgactggtgacagtgtttatattttggat
gttttaaataagtctgatgtgattgctgcttttattgagcaaatcatgattaatgaatct
atcgaaaaggtttttcacaatgcaagttatgatttgaaacttttaggcaataaaaaagcc
aaaaatatcacttgtactttagaaatggctaagtccataccatatcatattctaccattg
cctaattatcaactgaaaactctagctaatgtgttgtgtaatttttatggtattgataaa
caagaacaaggtagcgattggggtataagacctttaagcgatgatcaattagaatatgct
tattttgattgtatttatttagctcaagtacattcaaaattattagctttacagtctcaa
gttactacaaacccagaaacggaagatttatctttactttctcaaagatatacagaagtg
gaacagcaaaaaaaactgattaattctgaatttgattatttacaagaacgattaaaaaaa
gcgatgcaagttcaaaatatttcggaaactgaatattgtaaactcagcggttatgaacgt
aaatctgttaaggttaaatttaccgaattggtgagattagtggaaaatgaagatattgat
ttggattttcctattactctaactgagaaattacaaaaagaattaggcagaaatttggaa
caattagatgtcgatattgaaaaaagttctgtttggcggttaattgttaaatctcaggaa
gaagatgttaataatgatgaatag
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