Sphaerodactylus townsendi (Townsend's least gecko): 125424656
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Entry
125424656 CDS
T08213
Symbol
NEO1
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin
KO
K06766
neogenin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04350
TGF-beta signaling pathway
stow04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125424656 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125424656 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125424656 (NEO1)
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125424656 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Sp38
Arylsulfotran_N
EphA2_TM
TM_ErbB1
FAM176
SusE
Herpes_UL74
TMEM154
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125424656
NCBI-ProteinID:
XP_048338027
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All DBs
Position
LG17:2083074..2168507
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AA seq
1489 aa
AA seq
DB search
MVFFHSATAPVNQPFLLPAPPNMLSQGLLYHPDPSWFNLTACSKTSVLFSLRPTGPSVRT
FTPFYFTVEPADTLSIRAASVILNCSAYCESSPKIEWKKDGTFLNLVSDDRRQLLPDGSL
LINSVVHSKHNKPDEGHYQCVATVESLGTIVSRTAKLAIAGLPRFTSQPESASVSRGNSL
VLNCEVNADFAPFVRWEVDHKPLFPDDRVFQLSSGALIISNATDEDGGTYCCVLEIGGSP
KYSDEAEVKLLPELEVPSSLMFLRQPSSLTKAVGQSAVLPCVATGIPTPVVRWTRNEEEI
VTEGSQKFLLLAGGTLRISEVTEDDAGVYTCIADNGNETVDAQADLIVQAPPEFLKKPSN
IYAHESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQ
CIAENDVGNVQAGAQLIILDHDVAIPTLPPTSLISATTDHLAPATTGPLPSAPRDVVASL
VSTRFIKLTWRAPASDSHGDNLTYSVFYTKEAINRERVENTSHPGEMQVTIQNLMPETVY
IFRVVAQNRHGPGESSVPLKVATQPEVQLPGPAPNIRASANSPTSVTVSWATPLSGNGEI
QNYKLYYMEKETDNEQDIDVGGLSYTINGLKKYAEYSFRVVAYNKHGPGVSTQDVVVRTL
SDVPSAAPQNLSLEVQNSRSIMMHWQPPPVGTHNGQITGYKIRYRKVTRKSDVTESIVGV
QLSQLIEGLERGTEYSFRAAALTVNGTGLATDWVSAETFESDLDESRVPDVPSSLHVRPL
VTSIVVSWTPPENQNIVVRGYAIGYGVGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLK
AYNNVGEGIPLYESAVTRAYTDTSEVDLFVVNAPYTPVPDPSPMMPPVGVQASVLSHDTI
RITWADNSLPKNQKVSDARYYTVRWKTNIPANTKYKTANTTTLSFLVTGLKPNTLYEFSV
MVTKGRRSSTWSMTAHGTTFESVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGY
IIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSKGMGPMSEAVQFR
TPKAESSDKMSNDQALGSAGKGNRQMDAGPDYKTPMGSSNSPHGSPSPLEYNMLLVIIVS
VGVITIVVVVVVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLE
LKPIDKSPDPNPIMTDTPIPRNSQDVTPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRR
GMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSGSLASPTCSYLHHQANPWPVGSPV
SHSDRANSTESVRNTPSTDTMPASSSQTCCTDHQEPESATGPYPLQQCREEEPAQNLPTA
HVRPSHPLKSFAVPAVPPAGATYDPALPSTPLLSQQASSHPVHSVKTASIGTLGRTRPPM
PVVVPSAPEVQETTRMLEDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggttttcttccattctgcaactgctccagtcaaccagccctttctactcccagcacct
ccaaacatgctgtctcagggtctgctctatcacccagaccccagctggtttaacttaacc
gcatgctctaaaacaagtgttttgttttccttgcggcctacaggacccagcgtgaggact
ttcactccgttttattttactgtggagccagcggacactctgtccatcagagcagcttct
gtcatcctgaactgttcggcttactgcgagtcttctccaaaaatcgaatggaaaaaagac
gggactttcttgaacttggtgtcggacgacagacgccagctgctaccagatgggtctcta
ttaataaacagtgtggtgcatagcaagcacaataaacccgacgaggggcattatcagtgt
gtcgcaactgtggaaagcctggggacgattgtaagcagaacagcgaagctcgccatagca
ggtcttccaagattcaccagtcagccagaatccgcctccgtcagcagaggaaacagcctc
gtgcttaactgtgaagtcaatgctgatttcgccccctttgtgaggtgggaggtagatcac
aagccgctttttccggacgaccgcgtgttccagctgtcgagtggcgctctgataatcagc
aatgctacagacgaggatggcggcacatactgttgtgtcctcgaaatcggtggctctccc
aaatacagcgatgaggcagaggttaaacttctcccagaattggaagttccctccagtctg
atgttcctgaggcagccttcctcgctgaccaaagctgttgggcagagtgcagttttacca
tgtgttgctaccggcattcccactcccgtggtcagatggacaagaaacgaggaagagatt
gttacagaaggctctcagaagtttttattgctggcgggagggactctgaggatcagtgaa
gtcacagaagatgatgctggagtatatacctgcattgcggataacgggaacgaaacagtt
gacgctcaagcagatcttattgtacaggctcctcctgaatttctgaagaaaccttctaat
atctatgctcacgagtccatggatattgtctttgaatgtgaagtgacagggaagccaacg
ccaaccgtgaagtgggtcaagaacggagatgtggtgatcccgagtgattacttcaaaatt
gtcaaggagcataacctgcaagttttgggcctggtgaaatcagatgaaggcttttatcag
tgcattgcagaaaacgatgtaggaaacgtacaggcaggagcccagctgataatcctcgat
cacgatgttgccatcccaacattgccccccacttcactgatcagtgccactactgaccat
ctagcaccagcaacgacggggccattgccttccgcccctcgggacgtcgtggcttccctc
gtgtccacccggttcatcaagctgacctggagggctcctgcttccgactcacatggagac
aaccttacctattcagtgttctacaccaaggaagcaatcaacagggaacgtgttgaaaac
acaagccatcctggggagatgcaagtgacaattcaaaacctcatgcccgagacggtctac
attttcagagtggtagctcaaaacagacacggacctggagagagttcagtaccactgaag
gtggcaacgcaacctgaggttcagcttcccgggccggcgcctaacatccgggcatctgcg
aactcgcccacgtccgtcacagttagttgggccacgcccttatccggcaacggcgaaatc
cagaactacaaattatactacatggagaaggagacagacaacgagcaggacattgatgtc
ggaggcctttcctacacgatcaacggtttgaagaaatatgcagagtacagtttccgagtg
gtggcttacaataaacacggccccggagtttctacgcaggatgttgtcgttcgaactctg
tctgatgttcccagtgctgcgcctcagaatctgtctctggaagttcagaactccaggagc
atcatgatgcactggcagccacctcctgtggggacacacaatgggcaaatcaccggctat
aagattcgctaccgaaaagtgactcgcaaaagtgacgtgaccgaaagcattgtcggggtg
caactttcccagctgattgaaggtctcgaacgcggcaccgagtacagtttccgagcggct
gccttaacggtcaacggaactgggctggccactgactgggtgtcggcggagaccttcgaa
agtgaccttgacgaatctcgggttccagatgtcccgagttccctccacgtgcgcccgctt
gtaacaagcatcgttgtgagctggactccccctgaaaaccaaaacattgtggtcagaggc
tatgccattgggtacggtgtagggagtccccacgcacagactatcaaggtggattataaa
caacgatattacacgattgaaaacttggatcccagctcccattacgtcatcactttgaaa
gcgtacaacaacgtcggggaaggaatcccgctgtatgaaagcgccgtcaccagggcttac
acagacacttctgaagttgatttatttgttgttaatgctccgtacactccagtgccagat
ccctcccctatgatgccgccagtgggagttcaggcttccgtactgagccacgacaccatc
cgaatcacctgggcagacaactctctgccaaagaatcagaaggtctcagatgcccgctac
tacaccgtccggtggaaaaccaatatccctgccaatacaaaatacaagactgccaatacg
accaccttgagcttcttagtgaccggcttgaagccgaataccttgtacgagttctcggtg
atggtgaccaaaggccgaaggtcgagcacctggagcatgacagcccatgggaccaccttt
gaatcagtccccacttctcctccgaaggatgtcacggtggtgagcaaagaaggaaaacca
cgaaccatcatagtcaactggcagcctccgtctgaagccaacggcaaaattacagggtac
atcatttactacagtacggatgtaaatgccgaaatccatgattgggtcatcgagccggtc
gtaggaaacaggctgacgcaccagattcaagagctgaccctcgacaccgcgtactatttc
aagattcaggcccgcaactctaaaggcatgggccccatgtcagaggccgtccagttcaga
acgcctaaagctgaatcttcagataaaatgtctaatgatcaagccctgggatctgcagga
aaaggaaaccgacaaatggatgccggcccagactataaaacacccatgggcagcagtaac
agcccacatggaagcccttcccctctggagtacaacatgcttctagtcatcatcgtttct
gtgggagtgatcactattgtggtggtggtggtggttgccgtcttctgcactcgacgcacc
acttcgcaccagaagaagaagcgagctgcctgcaaatccgtgaacggttctcataaatac
aaagggaattccaaggacgtcaagccccctgacctttggattcatcacgagaggttggag
ctgaagcccatagacaaatccccagatcccaatccaatcatgacggacaccccgatccct
cgtaactcccaggacgttacaccggttgataactctatggacagcaatatccatcaaagg
cggaattcttacagggggcacgagtcggaagacagcatgtccacactggctgggagaagg
ggcatgaggcccaaaatgatgatgccgtttgactctcagccacctcagcctgtgattagt
gctcatcccatccattcccttgataacccccaccatcatttccactccggcagcctcgct
tctccaacctgcagctatctccatcaccaggccaacccatggccggttggctcacctgtg
tcccattcagacagggctaattccacagaatctgtccgaaatacacccagcacagacacc
atgccagcctcttcgtctcagacatgttgtactgaccaccaagagccagaaagtgccaca
ggaccttatccgctccagcaatgcagggaggaagagccagcccagaacctcccgactgcc
cacgtgcgtccctcccaccctctcaagagctttgctgtgccagcagtcccacccgcaggg
gcaacgtacgaccccgccttgccaagcacacctttgttatcccagcaagcttctagccat
ccagttcattcagtgaagacggcgtccattggcaccctcgggagaactcgcccccctatg
ccggtcgtggtcccaagtgcccccgaggtgcaggaaaccacaaggatgcttgaagactca
gaaagcaattatgaaccggatgagctgaccaaagagatggcccacctggaaggactcatg
aaggaccttaacgccatcacaacagcgtga
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