Sphaerodactylus townsendi (Townsend's least gecko): 125424745
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Entry
125424745 CDS
T08213
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stow00535
]
125424745 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125424745 (ACAN)
04091 Lectins [BR:
stow04091
]
125424745 (ACAN)
Proteoglycans [BR:
stow00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
125424745 (ACAN)
Glycosaminoglycan binding proteins [BR:
stow00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125424745 (ACAN)
Lectins [BR:
stow04091
]
C-Type lectins
Lecticans
125424745 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
EGF_TEN
hEGF
EGF_3
Antimicrobial25
cEGF
Ig_3
I-set
EGF_CA
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
125424745
NCBI-ProteinID:
XP_048338133
LinkDB
All DBs
Position
LG17:23685692..23776421
Genome browser
AA seq
1425 aa
AA seq
DB search
MTTLLLVFVSLQVITTAASVEVLDHGVTLSVSIPLHSPLCVPLGHTLTIPCYYIDTLEHV
TTAPFTAPLSPRIKWSRFSEGKEVVLLVALDGHVRINTAYQDMVSLPNYPAIPTDATLEI
KALRSNDTGTYRCEVIHGIEDSQDMVDVKVKGIVFHYRAISTRYTLDFQKAKEACIQNSA
VIATPEQLQAAYDDGFDQCDAGWLSDQTVRYPIVFPRSKCEGDKDDIPGVRTYGMRPASE
MYDVYCYVEKLNGEVFFATQPEQFTFLEAKEYCESQNATLASTGQLYAAWKLGLDNCRAG
WLADGSLRYPIRHPRHACGGDKPGVRTTYLHPNQTGFPDPQSRHHAFCFKALPSLYEEIE
EDLIAAQVVPGVEEVPSGEETTVETEFATDSENQTEWGTEVFPTNISLIYVSPSAVSPID
VDEVPITETSASGWTSGAPDISGKFEPSGEPSSFIESGFPSGAPDFSGLPSGESGLPSGD
ISGLPSGIIEVSILPSGDEELSGIGSGILDHREIIPGLQEGKGIPEISGLPSGFSGEGSG
VDLLSGLPSGEFDYSGLASGFPTVSLVNATLVEVVTTETEKEVEGKGTILLGRDGDLSGL
PSSEWHIDGITSGLPSGEDISGISGISGFSSGLDITGELSGIPDISGLPSGLDADGQLSG
LPDISGLSSGIDLSGAPFGIPDIIGSVDFSGLGSGVDGSGEPSGVTFIGANLFEVTTPST
KKEEGKGTVELSGLFSGDGESGTLSGNVDLSGQTSGQIDFSGWTVETHEVSGLPSGLTDI
SGESSGAGLTSGSPSGIFDYSGLPSGFPTISLVDTTLVEVATQPSVAQEAGEGTSGIFEF
SGFPSGETSGEPYDVTTVSGLSSGAVDISGTSSGIPYFSGEIASVTDLSGEPSAVSGTSG
DVSGIPEVTLVHSDLVEAVTDPTVSQELAGGTESMPPHFSEPSGEAFTSSGETSAYPEST
IKTPEYHDLTDETATIHEGSVETSTIHEISGEASSERHPETSTFFETGSETSALPGSHPE
TSGVPFIHGLPSEQYEEQSQIHGDSSGPPSQPASDGPEETFLPDMLPSTNDPDSELTEHA
KDPKETQVETEAYTHILSEMGAFPDVLLTPPSTTDVLPEVPPEVIEPIAEGSPKTCEEKL
CGVGTCQEQDSRITCLCPPGYTGDHCDIDIDECHSSPCLNGATCADGIHTFKCLCLPSYG
GDLCDIDLAECDVGWTKFQGNCYKYFEERHTWVDAENLCREHQSHLSSIITPEEQEFVNN
NAQDYQWIGLSDRAVEHDFRWSDGHSLQYENWRPNQPDNFFATGEDCVVMIWHEKGEWND
VPCNYHLPFTCKKGTVACSNPPEVENARHFGKKKDRYEINSMVRYQCSQGYLQRHVPTIR
CQPNGEWQEPQIACIDPSTYKRRLHKRSPRSRSRTNPGTAQRAAH
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttgctactagtatttgtgagtttgcaagtcatcactacagccgcctctgtg
gaagttttagatcacggagtcacactgagtgtgagcatacctttacactcccccttgtgt
gttcccctggggcacaccctgacaatcccctgttactacattgacacattggagcacgtt
accacagccccttttaccgcccccctgtccccgagaatcaaatggagcaggttctcagaa
ggaaaggaggtcgtcttgttggtggctctagacggccacgttagaatcaacactgcatac
caagacatggtttctctgcccaactacccagccattcctactgatgccaccctggaaatc
aaggctcttcgatccaatgatactgggacctatcgctgtgaggtgattcatggcattgag
gacagccaagatatggttgatgtgaaggtgaaaggcatcgtgttccactacagagccatc
tcgacccggtacactttggacttccagaaggccaaagaagcgtgcatccagaacagcgct
gtcatcgcaacccctgagcagttgcaggcagcctacgatgatgggtttgaccaatgcgat
gcaggttggctgtcggatcagactgtcagataccccattgtctttccacggagcaaatgt
gaaggagataaggatgacatcccaggggtgcggacttatggtatgcgcccagcatcagag
atgtacgacgtatactgctatgttgagaaactaaatggtgaggtcttttttgcaacccaa
ccagaacaattcaccttcctagaagctaaagaatactgtgaaagccagaatgctactctg
gcttccactggacaactctatgctgcctggaaactgggtctagacaactgccgtgctggc
tggctggctgacggcagtctccgatatcctatccggcacccacgtcatgcttgtggggga
gacaaacctggtgtgagaaccacctatctgcacccaaatcagaccggattcccagatccg
caatcaaggcaccatgccttttgcttcaaagctctaccatctctgtacgaggaaatcgag
gaggatctaattgcagcccaagtggtcccaggagttgaggaggttccttctggagaagag
acgactgtggaaacggagtttgccactgattctgaaaatcagaccgagtggggaacggag
gtatttccaacaaacatatccttgatctatgtgagtccatcagctgtttctcctattgac
gtggatgaagttcccatcacagagacatctgcgtctgggtggacatcaggagcaccagat
atcagtggaaagtttgaacccagtggggaaccctctagttttatagaaagtggatttcct
tctggagccccagatttcagcgggctcccttctggagaaagcgggctgccatcaggagac
ataagcggcctgccttcgggcattattgaagtcagcattttaccttctggagatgaagaa
ttgtcaggaattggttctggaatcctggaccatagggaaataatccctggacttcaagaa
ggcaaaggaattccagaaattagtgggctgccttctgggtttagtggagagggttctggt
gtggaccttctcagtggcttgccatctggagagtttgattacagtggacttgcatctgga
tttccaactgtgtctcttgtgaatgccacgttggtggaagttgtaaccacagagacagaa
aaggaagtggaaggaaagggaacaattctgctcggcagagatggagacttatcaggtttg
ccctccagtgagtggcacattgatgggataaccagtgggttaccgtcaggagaggacatt
agtggaatatctggtatcagtgggttttcctcgggacttgatatcactggagaactgtct
gggatacctgatataagtggattaccgtcgggacttgatgctgatgggcaactgtctggt
ttaccagatatcagtggactatcctcgggaattgacctcagtggagcaccatttgggata
cctgatataattggttctgtggacttcagtggactgggttcaggtgtcgatggaagtggt
gaaccttctggggttaccttcatcggtgccaatttgtttgaagtgacaaccccttccact
aagaaagaagaagggaaagggactgtagaattaagtggcttgttttcaggtgatggggaa
tctggaaccctgtctggaaatgtggacctaagtggtcagacttctggccaaatagacttc
agtggatggactgtagaaactcatgaagtcagtggacttccaagtggactaacagatatc
agtggagaaagttctggtgctggtctcaccagtggctcgccatctggaatttttgattat
agtgggctcccgtctgggtttcctaccatttctcttgtggatacaactttggtggaagtt
gcaacacagccatctgtggcacaggaagccggagaagggacatctggaatatttgaattt
agtgggtttccttctggggaaacgtctggtgaaccatatgatgtgaccactgttagtggg
ctgtcatcaggggcagtagacatcagcgggacatcatcaggcattccatattttagtgga
gaaattgctagtgtcactgacctaagtggagagccctcagctgtatctgggactagtggt
gacgtttctggaattccagaagtcactttagtacattctgatttagtagaagctgtgaca
gacccaacagtttcacaggaacttgctggtggaacagaatcaatgcctccccatttttct
gaaccaagtggggaagccttcacatctagtggagagacttctgcatatcccgaaagtacc
attaaaacccctgaatatcatgatcttactgacgaaacagctaccatccatgaaggtagt
gtagaaacttctactatccatgaaattagtggagaagcatcatccgaaagacacccagaa
acgtccaccttttttgaaacaggtagtgaaacatctgcattacctggaagccatccagaa
acttctggggtaccttttatccatggcttgccctctgaacaatatgaagaacaaagccag
attcatggggatagttcagggccaccttctcagcctgcctcggatggtccagaggagacc
tttttaccagacatgctgcctagcaccaatgacccagattctgaactaactgaacatgcc
aaagatccaaaagagacccaagttgaaaccgaggcttatacacatatactgtctgaaatg
ggagcatttccggatgttctgctcactcctccttctactacagatgtcctacctgaagtg
ccaccagaggtgatagagcctatagcagaaggttctcccaagacgtgtgaagaaaagctg
tgcggggttggaacctgccaagagcaagacagccgcatcacttgcttgtgcccacctgga
tatacgggcgatcactgtgatatagacattgatgagtgccactccagcccctgtctgaat
ggagctacctgcgctgatggcatccacactttcaaatgcttatgccttcccagctacgga
ggggacctctgtgacatcgatctggcagaatgtgacgtgggctggaccaaattccaaggc
aactgctacaaatattttgaagagcggcacacgtgggtggatgccgaaaacctgtgccgt
gaacaccagtcacacctcagcagcatcatcactccggaggaacaggagtttgtaaacaat
aatgcgcaggactaccaatggattggcctcagtgacagggctgtcgaacatgacttccgg
tggtcagatggacactcccttcaatatgagaactggcgacccaaccaacccgacaacttc
tttgccacgggagaagattgcgtggtaatgatttggcatgagaaaggcgaatggaatgat
gttccttgcaactatcacctcccgttcacctgcaagaaaggaacagtggcctgcagtaac
ccacccgaggtagagaacgcgaggcacttcggaaagaagaaagaccgctacgagatcaac
tctatggtgcggtatcagtgcagccaaggctacctgcagcgccacgtgcccacaattcgg
tgtcaacccaacggagagtggcaagagccacagatagcctgcatagatccctccacctac
aaacgcagactacataagagaagcccgcggtctcggtcaaggaccaatccaggaacggca
cagagagccgcccattaa
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