Sphaerodactylus townsendi (Townsend's least gecko): 125424861
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Entry
125424861 CDS
T08213
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125424861 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125424861 (POLR1B)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125424861 (POLR1B)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125424861 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
125424861
NCBI-ProteinID:
XP_048338258
LinkDB
All DBs
Position
LG01:46693188..46717211
Genome browser
AA seq
1134 aa
AA seq
DB search
MEAAYKWRGLPDSPSLKHLTEPSYRLVKDRQLSALQELTRAHIDSFNYAVGEGLQRAIQA
IPPFEFAFKNDRITVAIVGAIINPPVVPKGSICKELKVYPAECRGRRSTYHGRLTADISW
SKNGAPKGIIKQFLGNIPIMVKSKLCNLYGLSPKELIKHHEEEEEMGGYFIVNGIEKVIR
MVIMPRRNFPLAMIKQKWKSRGPGYTCYGVSMHCVRDEHTAVNMTLHYLENGTVMVNFIY
QKELFFVPLGFALKALVSFSDFQIFQELMKGKEEDTFYKNCVCQMLRLVVEEGCITQRQV
LSFLGQRFRVKLELPEWYTSEQVGEFLFNQCICIHLKTNAEKFYLLCLMTRKLFTLAKEG
CMEENPDSLMNQEVLTAGQLYLMFLKEKLEGWLQSVKIALERKAQKANVTINAENMMKIF
GMGIDLTRIFEYLLATGNLRSKTGLGMLQSSGLCVMADKLNFVRYLSHFRCVHRGSDFLK
MRTTEVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAMCEIVTQPAYTISLPPLLCSLGVT
PVDGMPSQSYVDCYPVVLDGSLVGWIEKNLAPSLVDTLRYFKIMQEKRIPVWTEVVLIPI
TGKPSLYPGLFIFTTPCRMMRPVQNLALGKEELIGTLEQVFLNIAVSEDEIVPGVYTHQE
LFPHSMLSVVANFIPFSDHNQSPRNMYQCQMSKQTMGFPLLTFQNRSDDKLYRLQTPQSP
LVRPSMYDYYNMDSYPIGTNAIVAVISYSGYDMEDAMVISKASWERGFAHGSIYKTDRID
LAEKVKQGSEFLVFGIGRDSPNPLKNLDPDGLPYVGAKLEYGDPYYSYLNLSTGESFVIY
HKNREICFVDAIKICSNDTGSGRFQSVCITLRIPRNPTIGDKFASRHGQKGILSRLWPTE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALG
HFGELLKAAGYNYYGTEKMYSGVSGEELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLQDRLFHCSDRSVAHVCVECGSLLSPL
LKPPPPGSTTRIRQYVCTVCERSDTIETIAVPYVFRCFVAELAAINVNVKLQVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcgtacaagtggcggggtttgcccgattctcccagtctcaaacacttgacg
gaaccgagttatcggctggtcaaggatcggcagctgtcggccttgcaggaactgacacgg
gctcacatcgactcctttaactatgccgtgggtgaagggttgcagcgggctatacaggcc
attccacctttcgagtttgcatttaagaatgatcggatcactgtggcaattgttggagcc
attatcaatccacctgtggtgccaaagggcagtatatgtaaagaactgaaagtttatcca
gcagaatgtaggggacgcagaagcacctaccatgggagactgacggctgatattagctgg
tcaaagaatggcgcccctaaaggcattatcaagcagttcctcggaaatattcctatcatg
gtgaaatccaagctatgcaatctctatggcctttctcccaaagaactcatcaaacaccat
gaggaggaagaggaaatgggaggttatttcatagttaatggtatagaaaaggtaatccga
atggtaatcatgccaaggcgcaacttccccctcgcaatgataaaacaaaagtggaaatcc
aggggccctggctacacatgctatggtgtctctatgcattgtgttagagatgaacacact
gctgttaacatgacccttcattatcttgaaaacggcacagtgatggtgaacttcatttat
cagaaagaattgttctttgtcccactgggatttgcgctgaaggcattagttagcttctca
gatttccagatttttcaagagttgatgaaaggaaaagaagaggatactttctacaagaac
tgtgtgtgtcagatgctgaggctggtggtggaagaaggctgcatcacacagagacaagtt
ctcagcttcctgggtcagcgcttcagagtgaagctggagcttcctgagtggtacaccagt
gaacaagttggagagttcctgtttaaccaatgcatctgcatacatctgaaaaccaatgct
gaaaaattctacttgctttgtctcatgacccggaaactgtttactttagctaaagaaggc
tgcatggaggagaatcctgacagtttaatgaatcaagaagtgctcactgctggacaactt
tacctcatgtttttaaaggagaagttggaaggttggttacagtctgtcaaaattgctttg
gaaagaaaggctcagaaggcaaatgtaacaattaatgcagaaaacatgatgaagattttt
ggcatgggaatagatcttacaaggatattcgaatacctcctggccactggtaacctgcga
tctaaaactggtctgggaatgttgcaaagctctggcctgtgtgtgatggcagacaaattg
aactttgttcgctacctctctcattttcgctgtgtgcacagaggttctgattttctcaag
atgagaaccaccgaagtgcgcaagttgctgccagagtcctggggttttctttgtccggtg
cacaccccagatggagaaccctgtggcttgatgaatcacatgacagctatgtgtgaaata
gtaacacagccggcgtacacaatatccttgccgcctttgctttgctccctcggtgtcacg
ccagttgatggcatgccaagccagtcctatgtagactgttacccagttgtgttagatggc
tctttggtgggctggatagagaagaatctagctcctagtcttgtagatacactcagatat
tttaagataatgcaagaaaagagaattccagtttggacagaggtagtccttattccaata
acaggaaagcccagcctgtacccagggctcttcattttcactaccccatgtaggatgatg
cgtcctgtacaaaacttggccttgggaaaagaagaattgattggcactctggaacaggtc
ttcttgaacattgctgtgtctgaggatgaaattgtacctggagtgtacactcaccaggaa
ctctttccccatagtatgttaagtgtagtagcaaattttattcccttctcagaccataac
cagagtcccagaaacatgtaccagtgccagatgagcaagcaaacgatgggctttccactt
ctgacctttcagaatcggtcagatgacaaactctaccggcttcagacccctcagagtccc
ttggtgcggccctccatgtatgattattacaacatggactcttacccaattggtacaaat
gcaatagttgctgttatctcctatagtggctatgacatggaagatgcaatggttataagc
aaagcttcatgggaaagaggatttgctcatggaagtatctacaagacagaccgtatcgat
cttgctgaaaaagttaagcaaggatccgaatttctggtgtttgggatcggtcgtgatagc
ccaaatcctttgaagaatttggatcctgatggtctgccctacgttggggcaaagcttgaa
tacggggacccttattacagctatctgaatctgagcacaggagaaagctttgtgatctac
cataagaacagggaaatctgttttgtggatgccatcaaaatatgtagcaatgacacagga
tcaggaagattccaaagtgtttgtatcaccctgagaatcccacgaaatccaactattggg
gacaaattcgccagccggcatggacagaaaggcatcttgagccgactgtggccaactgag
gacatgccatttacagaaagcggaatggtgccggacattctcttcaatcctcatggcttt
ccatcccggatgaccattggcatgttaattgagagcatggcagggaaatcggcagcactg
cacggactctgccacgatgccacccccttcacgttttccgaagagaactctgccctgggg
cactttggggaactgctgaaggctgctggctacaattactatgggactgagaagatgtac
agtggcgtcagtggagaagagctggaagctgacatttttattggagtggtgtactaccag
cggttgagacacatggtctctgacaagtttcaggttaggactacaggagccagagataaa
gtcaccaaccagcccattggaggaaggaatgttcaaggtggcatccgctttggagagatg
gagcgagatgctttgttggctcacggaacctccttcttgctgcaagaccgcctcttccac
tgctccgatcgttcagtggcccatgtgtgtgttgaatgtggcagtttgctttctcctctg
ctgaagcctccacctcctgggtctactacccgcattagacagtacgtttgtacagtttgc
gagcggagcgataccattgaaaccatcgctgtgccttatgtcttccgatgttttgtggca
gaactagcagccattaatgtaaatgtgaaacttcaggtgaaataa
DBGET
integrated database retrieval system