Sphaerodactylus townsendi (Townsend's least gecko): 125426006
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Entry
125426006 CDS
T08213
Symbol
ITGA4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
stow04514
Cell adhesion molecules
stow04672
Intestinal immune network for IgA production
stow04810
Regulation of actin cytoskeleton
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125426006 (ITGA4)
04514 Cell adhesion molecules
125426006 (ITGA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125426006 (ITGA4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125426006 (ITGA4)
04810 Regulation of actin cytoskeleton
125426006 (ITGA4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125426006 (ITGA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stow04147
]
125426006 (ITGA4)
04515 Cell adhesion molecules [BR:
stow04515
]
125426006 (ITGA4)
04090 CD molecules [BR:
stow04090
]
125426006 (ITGA4)
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125426006 (ITGA4)
Exosomal proteins of other cancer cells
125426006 (ITGA4)
Cell adhesion molecules [BR:
stow04515
]
Integrins
Integrin alpha subunits
125426006 (ITGA4)
CD molecules [BR:
stow04090
]
Proteins
125426006 (ITGA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
125426006
NCBI-ProteinID:
XP_048339972
LinkDB
All DBs
Position
LG02:complement(23247721..23320252)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGAPGRELQGGASSAGAIRLLLALGCYLRAALPYNLDTLSAQVYQGPDGALFGYSVLLHS
HGPSRWLVVGAPKANWSTNSSVVNPGAIFKCQIGRNPKRDCDLFQVGHPSGEWCGKRCVE
ERDNQWLGVSLSRQPGENGSIVVCGHRWKNIYHMKNNDKLPHGICYEIPSDFRTLLSQRI
CPCYRDALQRFGEKHGACQVGIHTFYIEDLIIMGAPGSTYWTGSIFVYNKTANTFLPYVD
ADNQVKFGSYLGYAVGAGRFLSPNSVEIVGGAPQQEQTGKAYIFKLETSLPILTELEGKK
LGSYFGAAVCAVDLNGDGLSDLLVGAPMHSELREEGRVYVYMNSGSESKMIELDIALAGS
DLYAARFGESIANLGDIDNDGFEDVAIGAPQENDLEGALYIYNGREDGISPTFSQRIQGH
QISNSLRMFGHSISGNVDVDNNGYSDVAIGAFLSDSAVLLRTRAVVIVKAFFEHPHSVNR
SKLECVENGQPAVCVNLKICFTYHGRAAPGHIVLLYNLSLDVSRRSETPARFYFSSNGTS
EFIPGSIEIYNNNVTCRDHPAFMRKDVRDILTPIRVEATYHLGHHVLKRKSADELPPLQP
VLQQRKEDNVVHSKFVFARFCTQENCSADLRVSGNLGLPKPHEKKSYLAVGSMKTLMLNV
TLHNAGDDAYQTALHIQLPKGLYFIKILELEEKQIHCEVSEKEIHAVRLDCSVGYLYVDH
LSKLDFSFLLDASSLTRAGDDLIISINATCENEEDGDILLDNSLNLILPQKYEVELNGHG
LVSPMSFVYGPSEENVAVTCMKEMINFTFHVSNPGLSLAPDVALEIQIPNSIIPKDIRLF
NIFDVQTTVGKCVYKNDRECILPEKNENILKDLITFLTKPDKRLLYCMKNDPLCLQILCN
FGDLESGKEATVHVYLEATPSLLNEDAASALKFEVRGKVSSGQNPKVIELHKDKQTAYVI
LEGLHNRKAKWSVKMLFIGFGSIVGVLLLLFLSYVLWKVGFFQRKYKLIPQEENGRQSNQ
MED
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcccggccgggagctgcagggaggcgcttcctccgcaggggcgatccggctg
ctcctggcgctcggctgctacctgcgggcggctctgccttacaacctggacacgctgagc
gcccaggtctaccaggggcccgacggcgccttgttcggctactcggtgctgctgcacagc
cacggccccagcagatggcttgttgtgggggctccgaaagccaactggtctacaaacagc
tcggtggtgaacccaggtgcgattttcaaatgccaaattgggaggaatcccaagagggac
tgtgacctgttccaagtgggtcacccaagtggagaatggtgtggaaagaggtgtgtggaa
gaacgagacaatcagtggcttggagttagtttgtcaaggcagcctggagaaaatggatct
attgttgtttgtggccatcgatggaaaaatatctaccatatgaaaaataatgacaaactt
cctcacggcatttgctatgaaataccttctgattttcggacattgttgagtcaaagaata
tgtccttgttatcgggatgccctgcaaagattcggagaaaaacatggagcatgccaggtt
ggaatacatacattttacatagaggatttaattattatgggagctccgggatcaacttat
tggactggctccatctttgtatacaacaaaacagcaaatacctttctcccgtatgtggat
gcagataatcaagtaaagtttggaagttatttagggtatgccgtcggagcaggccggttc
ctctctccaaacagtgtggaaatagttggaggtgctccccaacaggaacagactggtaaa
gcatatatttttaaactggagacaagtctacccattttgacggaactggagggtaaaaag
cttggttcttattttggagcagctgtctgtgcagtggatctcaacggggatggcctctcg
gacttactggtgggtgccccaatgcacagtgagctcagagaagaaggaagggtttatgta
tacatgaactcaggctccgaatcgaagatgatagaactggacatagcattggctgggagt
gacttgtatgcagcaaggttcggagaatccattgccaatttgggagacattgataatgat
ggctttgaagatgtagccattggggctccacaggaaaatgatttagaaggggcactttat
atatacaatgggagagaagatggaatatcacctaccttctcacagagaatacaaggccac
caaatcagcaactcattacgtatgtttggtcattctatatctgggaatgttgatgtggac
aataatggatattctgatgtagcaattggtgcttttctgtcggattctgctgtgctactc
aggacaagagcagtagtgattgttaaagcattctttgagcaccctcattcagtaaatcga
agtaaattggaatgtgtggaaaatggacagccagctgtgtgtgtgaatttgaagatctgt
tttacctatcacggccgagctgctccgggtcatattgtattgctttataatctaagcctg
gatgttagcaggaggtcagaaacccctgcaaggttttatttttcctctaatggaacgtcc
gaatttatccctggaagcattgaaatttacaacaataatgtcacttgcagagatcaccca
gcgttcatgaggaaagatgtaagggatatcctgactcctatacgtgtggaagccacttat
cacctcggacatcatgttctgaaaagaaaaagtgccgatgaactcccacccctccagcct
gtccttcagcaaagaaaagaagacaatgttgtgcacagcaagtttgtttttgcaagattt
tgcactcaagaaaattgttctgctgacttgcgggtttctggaaacctcggacttccaaag
ccacacgaaaagaaatcttatcttgcagttgggagtatgaaaacgttgatgttaaatgtc
accttgcacaatgcgggtgacgatgcctatcaaactgccctccacatccaactccctaaa
ggtctttatttcatcaaaattctagagctggaagaaaagcagatacattgtgaagtctca
gaaaaggaaattcatgccgtgagacttgactgcagtgttggatatttatatgtagatcac
ctgtcaaagctggactttagttttctgctggatgcgagttcacttacaagggcaggagat
gacctcatcatcagcattaatgcaacctgtgaaaatgaagaagatggggacatattgttg
gataacagcctaaatttaattttgcctcagaagtatgaggtggagctgaatggtcatggg
cttgtatctccaatgtcatttgtttatggacctagtgaagaaaatgtagcggttacttgc
atgaaagaaatgatcaactttactttccatgtcagtaatcctggcctaagtctggctcct
gatgtggccttggagatacagatacccaattctattataccaaaagacatccggctgttc
aacatttttgatgttcagacaacggttggaaaatgtgtctacaaaaatgatagagaatgc
atcttgccggagaaaaatgaaaacatactgaaggatctgattactttccttacaaagcct
gacaagaggttattgtactgtatgaaaaatgacccactgtgcttgcaaatactttgcaac
tttggagacttggaaagtgggaaagaagcaactgttcatgtctatctagaagccacccca
tcactgctaaatgaggatgcagcttcagcacttaaatttgaagtgagaggcaaagtttca
tcgggtcagaatcctaaagttattgaactacacaaagacaagcaaactgcatatgtcatt
ctggaaggattgcacaaccgcaaagcaaaatggagtgttaaaatgttgtttattggattt
ggttcaatagttggagttcttttgcttctgtttctttcatatgttttatggaaggttggc
tttttccaaagaaaatacaaacttattcctcaagaagagaatggaagacaaagcaaccaa
atggaagactaa
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integrated database retrieval system
