Sphaerodactylus townsendi (Townsend's least gecko): 125426155
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Entry
125426155 CDS
T08213
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125426155 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125426155 (AQR)
Spliceosome [BR:
stow03041
]
Complex B
Other components
Prp19-related factors
125426155 (AQR)
Complex C
125426155 (AQR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
UvrD_C_2
SLFN-g3_helicase
DEAD
AAA
AAA_16
Parvo_NS1
AAA_22
PhoH
DnaB_C
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
125426155
NCBI-ProteinID:
XP_048340319
LinkDB
All DBs
Position
LG02:131589646..131648997
Genome browser
AA seq
1486 aa
AA seq
DB search
MATPGGSVGGTQQESLLSSLPPPKKIVAPTVSQINAEFVTQLANKFWAPHVKKKLPFESK
VVEDVYGKEIVRSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRE
NVPAWETFKRKPEHFPFFFKRVLEASLAENDSEFSLQEQTILLLFLDHCFNSLEVDLIRA
QVQQLISLPMWMGLQPARLELELKKTPKLRKFWNLIKKNDEKMDENTRIQAYKERRFLSQ
LIQKFISVLKSIPISGSLSMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVHCY
LSSLAKRDKEGHLFCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAH
FPELYNFALSNVSAIDTRDSLVKLFGPLCPDTLHQVASYLCLLLALREGEDTSYEKEFLL
ELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHD
YLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGSVVFGGWARMAQPIVSFTVVEVAK
PNIGENWPMRVRADVTVNLNVRDNIKDEWEGLRKHDVCFLITVRPTQLYGTKFDRRQPFV
DQTGLVYVRGCEIQGMLDDKGRVIEEGPEPKPRLKGDSRTFRVFLDPNQYQQDMTNTIQN
KTEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSK
MPNQIASLDFNDTFLSIDHLKASFPGYGIKVTVDDPALQIPPFRITFPVRSDAGKKRKEC
EGGEKAEDCKTLTVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPP
GTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEE
LETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWE
EYISKVKVKGSKPPDVGDISSFFPFHKYFANAPQPIFKGRSYSEDMEIAEGCFRHIKKIF
TQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAA
QILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVR
VGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFRTANAGFLYDFQLINVEDF
HGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPAEKISILTTYNGQKHLIRDIINQRC
GNNPIIGRPNKVTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFA
RVSLFQNCFELTPAFSQLTARPLQLHIIPTEYFPTMRQNGEHPSHQVHLIKNMPQMANFV
YNMYMHMIQSTRQYRQPNLLPPPALVEESETLQSQESEIAQSQEGEMETEVETKTPPVET
AAEKVLKEKEKVAEEEEEHRKMPEHPGRDSDSEDSEPEEDSVPSKG
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccagggggatccgtggggggaacccagcaggagtcgttgctgtcgtcgctg
ccaccgcccaagaaaatcgtggctcccaccgtgtctcagatcaacgcagagttcgtgacg
cagttggcaaataagttctgggcaccccatgtcaagaaaaaactaccttttgagtcaaag
gttgttgaagatgtatatgggaaagaaattgtcaggtcaaggtttgccattagaaaaata
atgctgctagaattcagccagtaccttgaaaattacttatggatgaattattctcctgag
gtgtccagcaaggcttatttgatgtcaatctgctgtatggtgaatgaaaagttcagagag
aatgtgcctgcatgggagacgttcaaaagaaaaccagagcacttcccattctttttcaaa
cgtgttttggaagcatccttggctgaaaatgacagtgaattctcactgcaagaacagaca
atactcctactgttccttgatcattgtttcaacagtttggaagtggatttgatcagagca
caagttcaacaactcatctccctgccaatgtggatgggcctgcaacctgctcgtctggaa
ctcgaattgaaaaagacaccaaagcttcgtaaattttggaacttaatcaagaagaatgat
gaaaaaatggatgagaatacacgaatacaagcatacaaagaaagacgatttctgtcacag
ctgatccagaaattcatctctgtattaaaatcgatacccatttcaggctccttgtctatg
gataaagttcactactgcgaaagattcattgaactcatgatagatctagaggccctgctt
ccaacccggcgatggtttaatactgtcttagatgattcccacctagttgttcattgttac
ttgtccagtctggccaaaagagacaaggagggtcatctgttctgccagcttttagacatg
ctaaaattctacactggctttgaaattaatgaccagactggaaatgcgttgacagagaat
gagatgacgacaattcactatgacagaattacttccctccagagagcagcgtttgcccat
tttcctgagctttacaattttgccctctcaaatgtgtcagccattgatacacgggactca
ctggtaaaactttttgggcctttatgtcctgacacactccaccaggtggcatcatatctc
tgcttactgctagccctacgtgaaggggaagatacaagctatgaaaaagaatttctactg
gaactattggtatctcggcacgaacgccgaatttctcagatacagcagctcaatcagatg
cctctgtatcctacagaaaaaattatttgggatgaaaacattgttccaactgagtattat
tctggagaaggttgccttgccctccccaaattgaatttacagtttctgactcttcatgac
tacctcttgagaaatttcaacctctttcgcctagaatctacctatgagatcaggcaggac
atcgaagacagcgtcagtaggatgaaaccttggcagtctgaatatggcagtgttgtcttc
ggtggatgggctcggatggcacagcccattgtctctttcacggtggtagaggtagcgaag
cccaacatcggggaaaactggcctatgagagtccgagcggatgttacagttaacttgaac
gttagagacaacatcaaagatgaatgggaaggccttcgcaaacacgatgtttgcttttta
attactgtccgacccacacaactatatggcacaaagtttgacagaagacagccgtttgtt
gatcagactggcctagtctacgtgagaggatgtgaaatccagggcatgttggatgataaa
ggccgtgtcattgaagaaggaccagaaccaaagccaagacttaaaggagactctagaaca
tttagagtgtttttggatcctaaccagtatcaacaggatatgaccaataccatccagaat
aaaacggaagatgtctatgagacatttaatataataatgagaagaaagccaaaggaaaat
aacttcaaagctgttctggagacaatacggaatttgatgaacacagactgtgtggttcct
gactggttacatgacatcatccttggttatggagacccaagcagtgctcattattcaaaa
atgccaaatcaaattgcctccctggattttaatgataccttcctttctattgatcattta
aaagccagctttcctgggtatggcattaaagtaactgttgacgatcctgcgctacagatc
cctccattcaggataacttttcctgtgagaagtgatgcaggaaagaaacggaaggagtgt
gagggtggtgaaaaggctgaagactgcaaaaccttgactgttgagcctcacgtgattccc
aacagaggaccttacccatataatcaacccaaacgcaatacaattcagttcactcataca
cagatcgaagctatacgtgctggaatgcaacctggattgacgatggtggtggggcctcct
ggtacaggtaaaactgatgtggcagtacagataatatccaatctctatcacaactttcca
gaacagaggacccttattgttacacattccaatcaggccttgaaccagctgtttgagaaa
atcatggctctagacattgatgaacgccacctcctgcgtcttggtcacggagaggaagaa
ctggagacagagaaagacttcagcaggtatggaagagtgaactatgttcttgcccggagg
ctggaacttctgcgagaagttggccgactgcaagagagtttgggggtgccaggagatgtt
tcctatacttgtgaaacagctggccatttcttcttgtatcaagtgatgtcccgttgggaa
gaatatataagcaaagtgaaagttaaaggtagcaaacctcctgatgttggggatatctct
agtttttttccgtttcacaagtattttgcaaatgcccctcagccaatttttaaaggcaga
tcttacagtgaagacatggaaattgctgaagggtgttttagacacatcaagaaaatattc
acccagcttgaggaattcagagcatttgaacttcttcgtagtggactggatagatccaaa
tacttactggtgaaagaagcaaagattattgcaatgacttgcacgcatgctgctttgaaa
cggcatgacctcgttgagctgggtttcaagtatgataacattttaatggaagaagctgct
cagatactggaaattgaaacttttatcccactcctcttacagaatccacaggatgggttc
agccgactgaaacgctggattatgattggggaccatcatcagttgccgcctgtcattaag
aacatggcatttcaaaagtattccaacatggagcagtctctttttacacggtttgtccgt
gtgggagtgccgactgttgacttagatgctcaaggaagagcaagagcaagcttgtgcaat
ctctacaactggcgttacaagaacctgggtaacttgccacatgtacaactcttgccagaa
ttcagaacggcaaatgctggcttcctgtatgatttccagcttataaacgttgaagatttt
catggtgtaggagaatctgaacctaacccttatttctatcagaaccttggcgaggcagaa
tacgttgttgcactcttcatgtacatgtgcctgttgggttacccagcagagaagatcagt
atcttgacaacatataatggacaaaaacacctgattcgagatataattaatcaacgttgt
gggaataaccccatcattggaaggccaaacaaggtgacaactgtggatagatttcaaggt
cagcaaaatgattacattatcctttcgcttgtacgaactaaagcagttggacacttgagg
gatgttcggcgtttggtggttgctatgtcaagagcaagacttggactctatatatttgca
agagtatctctatttcagaactgctttgagctaactccagctttcagccagctcactgct
cgccctcttcaactgcatataattcccacagagtattttccaacaatgcgacagaacgga
gaacatccatctcaccaagttcatctgataaagaatatgcctcagatggccaactttgtg
tacaacatgtacatgcatatgatacaaagtacacgccagtacagacagccgaatttattg
ccacctccagcacttgttgaagaaagcgaaacactccagtcacaggaaagtgaaatagct
cagagtcaggaaggtgaaatggaaactgaagttgaaaccaaaaccccaccagtggagact
gcagcagagaaagtgttgaaggagaaagaaaaggtagcagaggaagaggaggagcatcgg
aagatgcctgaacatcctggaagagatagtgatagtgaagacagtgaaccagaggaggac
agtgtgccaagcaaaggctga
DBGET
integrated database retrieval system
