Sphaerodactylus townsendi (Townsend's least gecko): 125426314
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Entry
125426314 CDS
T08213
Symbol
TRPM5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125426314 (TRPM5)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125426314 (TRPM5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Flagellar_rod
Motif
Other DBs
NCBI-GeneID:
125426314
NCBI-ProteinID:
XP_048340531
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Position
LG02:complement(82093619..82162881)
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AA seq
1403 aa
AA seq
DB search
MGDEDGETYQLWVEVDADVTTSLLEETSSHCNVMGDALAVEHEAFRRRQSNTNDNPDLRD
KDHFSDGSCQTRNPTVALKEDTQVKVYNNDKEETFRRELPYCTGEIDFMASGKKGGKFIK
VPCAIHPRVIFDVMSNKWNLPAPNLVVSLVGEEENFQMKPWLRDTLRKGLVKAAQSTGAW
IFTSALCVGITKHIGQAVRDHMLASTSSTVKVVAIGITSLGNIQHRELLKNVKNDSLINY
KYEHNTQGPLYFLDNNHSHFILVDEKEPGGTTSLRLTLEKHISEQRTGYGGTGSIEIPVL
CLLVNGKPKILERIYRGLKNSAPWLILAGSGGIADILSALMNEPHLIVPQVVEKQLKEKF
PTEDFLHKDILHWTAVIQNIIAHQHLLTVHGFEQEGSEELDTVILKALVKACKSHSQDAQ
EYLDELKLAVAWDRVDIAKSEIFNGDVEWKSCDLEEVMMDALVNDKPEFVKLFIDNGANI
FDFLTYSRLQRLYCTISPKCLLYSLLLKKHEENRLTLAGMSGQQHKETMDTCLLFTLHEV
SRVLKDFLHDACRGFYQEQKSGSKKETDKLHAKRLPGPLDMNQKSENPWRDLFLWAVLQN
RHKMAYYFWAMGQEGVAAALAACKILREMSHLEIDAEVVRRMKEAKYEQLAVELFSECYH
NSEDRAFALLVRRNCFWSKTTCLHLATEADTKSFFAHDGVQAFLTKIWWGDMSTSTPIWK
LICGFWCPFLIYTNLISFRYAYCQSVDAIAGLPAVVPEGSIKTPTVEGSHSSHQKLREEG
AATNMAVPPFLMSEETQSVEEPESFKELYSLDTERSLLFPKEVDRALINSGTCGRKRGFS
LPSHSLFLSQKKPLGGKGCLTVTYTSSAELDEASRAPPQGSILSPPGCAGAGRGFLEAEL
TEELHLSPPVDDFLIIGRQGTREWERPLQDVQVLAASLGGPVAPNKAEGPAAALSYLAYA
AFVFTRWKKFWTAPVTVFMGNVIMYFAFLFLFSYVLLVDFKPPPPNGPSIHEVILYFWVF
TLVLEEIRQSFFTDEDMNLMKKFKLYVEDNWNKCDMVAIFLFIIGVTCRMLNSTFQDGRT
ILAIDFMVFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVTTQALLH
PDDSRSEWIFRRVLYRPYLQIFGQIPLDEIDSSRMELENCTSKDNVLSCPNDYANWLVIL
LLVIFLLVTNVLLMNLLIAMFSYTFQVVQGNADIFWKFQRYNLIVEYHGRPAFAPPFIII
DHIKLFLRRILKKMEHKKEHMERDLPEGLDQKIITWEMLQKENYLANLEKNKKESNEERL
KKMSDKVNSLSKYFSGLKEQDKRLRSLESQINYCTVILSSVADTITKNSLSCQGPPLNYT
CREQQQQDLAGKGEPEDGGAKVS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgaagatggggagacttaccagctgtgggtggaggtcgatgcagatgtgaca
acatcacttctggaagagacatcatcacattgtaatgtgatgggagatgctctggctgtt
gagcatgaagccttcagaagaagacaaagtaacacaaatgataatccagacttaagggat
aaagatcatttcagtgatggcagttgtcagaccagaaatcctacagtggccttgaaggaa
gacacacaggttaaagtttacaataatgacaaagaagaaacatttagaagagaattgccc
tactgcacaggggaaatcgacttcatggcttccggaaagaaagggggaaagtttattaag
gtcccatgtgccatccatcccagagtaatttttgatgtcatgagcaacaaatggaatctt
cctgctcccaacctggttgtttctttagttggagaagaagaaaacttccagatgaaacct
tggttacgtgacaccttaaggaaaggactagtaaaggctgcacagagcactggtgcctgg
atttttaccagtgctttatgtgttggaataacaaaacacatagggcaagctgtccgagat
cacatgttggcaagtacatcgtccacagtgaaagtagttgcaataggaataacttcactg
ggaaatattcagcacagagagcttttgaaaaatgttaagaatgacagtcttataaactac
aaatatgaacataatactcaaggtcctctatattttcttgacaacaatcactcccatttt
attttggtggatgaaaaggagccaggtgggactacaagtctacgtcttaccttggagaaa
cacatttcagaacagcgcactggctatggaggaacaggtagtattgaaatccctgtactt
tgcttacttgtgaatggaaaacctaaaatacttgagcgcatttacaggggcttgaaaaat
tctgccccctggctcatcttggcaggatctggtggcatagctgacatcttatcagcacta
atgaatgagccccacttaatagtgccacaggtggtggaaaaacagctgaaagagaaattt
cctactgaagatttcttgcataaggatattcttcactggactgcagtgatccaaaacatt
attgcccatcaacatcttctaacagtgcatggttttgagcaagaaggttcagaagaattg
gatacagtaattctgaaagctctagttaaagcttgtaagagtcatagtcaagatgctcag
gagtacctggatgaactgaagctggctgtggcctgggacagagtggacatagctaagagt
gaaatattcaatggtgatgttgaatggaagtcatgtgatctggaggaagtgatgatggat
gccctggtgaatgataaaccagaatttgtcaagttatttattgataatggggccaacatc
tttgacttcctgacctatagccggctacagagactctactgtaccatctcaccaaagtgt
ctcctgtattcacttttgcttaaaaaacatgaagaaaatagactcactttagcagggatg
agtggtcaacagcacaaagaaacaatggatacttgcctgctcttcactctccatgaagtt
tccagagtgctgaaggattttttacatgatgcatgcagaggtttctatcaagaacagaag
tctggaagcaagaaggaaactgataagttgcatgcaaaaaggttacctggccctttggac
atgaatcagaaaagtgaaaatccttggagagacttatttttatgggcagtacttcaaaat
cggcacaagatggcatactatttctgggctatgggacaggaaggtgtagctgcagctctg
gcagcttgcaaaatcctccgagagatgtctcatctggagatagatgctgaagtggtccgc
agaatgaaagaagcaaaatatgagcagcttgctgtggaattattcagtgaatgctaccac
aacagtgaggaccgagcttttgctttgctggtgaggagaaactgtttctggagcaaaacc
acttgtctccatttggccacagaagcggataccaagtctttctttgcacatgatggggtg
caggcttttctgacaaaaatctggtggggagacatgtcaacatccacccctatctggaag
ctaatttgtgggttttggtgtcctttcctgatatatactaatttaatatcattcaggtat
gcttactgtcaaagtgtggatgccattgcaggactacctgcagtggtgcctgagggcagt
atcaagacacccactgttgaaggcagccatagctcacaccagaagctgagagaggaaggg
gcagccaccaacatggctgtcccgcctttcctgatgagtgaggaaacccaatcagtggaa
gagccagaatcatttaaagagctttacagcttggatacagaaaggtctttgctttttccc
aaggaagtggatagggccctaatcaattcagggacatgtggaagaaagaggggcttcagc
ctcccctcccactcccttttcttgagccaaaagaagccactggggggcaagggttgcctc
actgtaacgtacacatcctcggcggagctggatgaagcgagtcgggccccacctcagggg
tcaattctgagcccaccgggctgcgcgggcgccgggcggggcttcctcgaagcggagtta
acggaggagctgcacctttcgccaccggtggatgatttcttgattatcggcaggcaaggc
acccgggagtgggagcggccccttcaagatgtccaggtcctagccgcctcgctggggggc
cccgtagctcccaacaaggcggaggggcccgccgctgccctcagctacctggcatatgca
gcatttgtgtttacacgatggaaaaaattctggactgctcctgtcacagtgtttatgggg
aatgttattatgtactttgccttcctctttctgttttcctatgtccttttggtggatttt
aaaccaccaccacctaatggtccatccatccatgaggttatactttatttttgggttttt
acattggtcttggaagaaatccgacagagctttttcactgatgaggatatgaatttaatg
aagaagttcaaattgtatgtagaagacaactggaataagtgtgatatggtcgccatcttc
cttttcatcattggagtcacttgcagaatgctgaattcaacctttcaagatggccgaacc
atactagctattgattttatggtgttcactctcagactgattcatatttttgctattcat
aagcagctgggtccaaagattataattgtagagagaatgatgaaggatgttttcttcttc
ctttttttcctgagtgtgtggcttattgcttatggtgtgaccacccaagccttgctccat
cctgatgacagtcgatctgagtggatcttcagaagggttctctaccgtccttaccttcaa
atatttggacagattccactggatgaaatagattcatctcgcatggagctggaaaattgc
acatcaaaggacaatgtgttatcttgtcctaatgattatgctaattggcttgtcatcctc
ctcttggttattttcctcctggttacaaatgttctgcttatgaatctactgattgccatg
ttcagttatacttttcaggtggttcagggaaatgcagacatattctggaaatttcagcgt
tacaacttgattgttgaataccatggtcggcctgcgtttgccccaccttttatcattatt
gaccacattaagctgtttctaagacgaattctcaagaaaatggagcataaaaaagagcat
atggaaagagatctgccagaaggcctggatcaaaaaatcataacctgggagatgttacaa
aaagaaaactacctggcaaacctggaaaagaataaaaaagaaagcaacgaagaaaggcta
aagaaaatgtccgacaaggtgaacagtctttcaaaatattttagtggtttaaaagaacaa
gataaacggcttcggtcattggaatcacaaatcaattattgtacagttatcctttcctcg
gtggcagataccataaccaaaaacagcttgagttgccaaggaccccctctgaactacaca
tgtagggagcagcagcagcaagacttggctggcaagggggagccggaggatgggggagcg
aaggtcagctaa
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