Sphaerodactylus townsendi (Townsend's least gecko): 125426332
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Entry
125426332 CDS
T08213
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125426332 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125426332 (RAG1)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125426332 (RAG1)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125426332 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
125426332
NCBI-ProteinID:
XP_048340548
LinkDB
All DBs
Position
LG02:107516960..107520091
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AA seq
1043 aa
AA seq
DB search
MEMLAPPSVNLCSTSEQNQQPYKKFSEWKFKLFKVRSLEKSLCEDSHLAKDDKGKVAASS
DKVNDAMTLMPQESFHTGKNLNNGMQTADKDAFYVNQIEVEAHRVNLQHLCRICGGSFKN
DPYRRSHPVHGPVDEEMQALLRKKERRATSWPDLLNKVFKIDVRGDMDTIHPTNFCHNCW
SVIQRKFSNAPCEVYFPRKGTMEWHPHSMNCDVCGTSSHGIKRKSQAPNPQVNKKLRIMA
ERARKIIYAKSQKHVNSKSILKKITNCKKIHLSTKMLTVDYPADFVKSISCQICEHILAD
PVETTCKHLFCRLCILKCLKVIGSYCPSCRYPCFPTDLVNPVRSFLSVLNTLTVRCPVKD
CHEEATLGKYSHHLSSHKEKNGKGTYVHVNKGGRPRQHLLSLTRRAQKHRLRELKLQVKT
FAEKEEGGDVKSVCLTLFLLALRARNEHRQADELEAMMQGKGTGLSPAVCLAIRVNTFLS
CSQYHKMYRTIKAITGRQIFQPLHALRTAEKSLLPGYHQFEWKPPLKNVSSNTEVGIIDG
LSGIQHLVDDYPVDTIAKRFRYDVALVSALMDMEEDILEGLKSHDLDDYLKGPFTVVIKE
SCDGMGDVSEKHGCGPAVPEKAVRFSFTVMNITVAHGNVNIRIFEENKPNSELCCKPLCL
MLADESDHETFTAILSPLVAEREAMKNSELLLDMGGIPRTFKFIFRGTGYDEKLVREVEG
LEASGSTYICTLCDATRLEASQNLILHSITRSHAENLERYEVWRSNPYHETVDELRDRVK
GVSAKPFIETVPSVDALHCDIGNAAEFYKIFQFEIGEVYKNPNASKEERKRWQSTLDKHL
RKKMNLKPVTRMNGNFARRLMSKETVEAVCELMQCEDRHEALRELMDLYLKMKPVWRTSC
PSKECPELLRQYSFNSQRFAELLSTKFKYRYEGKISNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEIEDVLKHHWLYTSKYLQKFMNAHNTLKTQGITIN
PEQSVDDFITLEDSLQITDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctggcaccgccaagtgtgaacttgtgttccacatcagaacaaaaccaacag
ccatataagaaattttcagaatggaaattcaagctcttcaaagtgcgatctcttgaaaag
tcactttgtgaagacagccatctggctaaagatgataaagggaaagtggcagcctcttcg
gacaaagtcaatgatgcaatgactttgatgccacaagaatcctttcatacaggaaaaaat
ctgaacaatggaatgcagactgcagataaagatgccttttatgtaaatcaaatcgaagtt
gaagcacaccgagtaaacttgcagcacctctgccgtatatgtggtggttcgtttaaaaat
gatccttataggagaagccacccagtccatgggccagtagatgaagaaatgcaggccctt
ctgaggaaaaaagaaagaagggccacttcttggccagatctacttaacaaggtttttaag
atagatgtgagaggagacatggacacaatccatccaactaatttttgtcacaactgctgg
agtgttatccagaggaagttcagcaatgccccatgtgaagtgtattttccaaggaaaggt
actatggaatggcacccacattcaatgaactgtgatgtttgtggcacttcctcccatggg
ataaagagaaagagccaagcccccaatccacaggtgaacaaaaagctcagaatcatggct
gaacgtgctagaaagataatatatgcaaaaagccaaaaacatgtgaacagcaaaagcatc
ctgaaaaagattaccaactgcaaaaagatccatctgagtacaaagatgctcacagtagac
taccctgcagattttgtaaagtcaatctcctgccagatttgtgagcatattctggctgac
ccagtagaaacaacgtgcaagcacttattctgcagactctgcatccttaaatgcctcaaa
gtaataggaagttattgtccatcctgtcgctatccttgttttcctactgatctggtgaac
cctgtgagatccttcctgagtgtactcaacactttgactgtgaggtgtccagtgaaagac
tgtcacgaagaagccactcttggaaaatatagccatcatctttcaagtcacaaagagaaa
aatggcaaagggacttatgtccatgttaataaaggtggccgaccaaggcaacacttactt
tcactgacccggagagcccaaaaacatcgccttagagaactcaagcttcaagtgaaaact
tttgctgagaaagaagaaggtggagatgtgaagtctgtgtgtctaaccttatttttgttg
gctctgagggctcgaaatgaacacagacaagctgatgaattggaagctatgatgcagggg
aaaggaacaggactttctccagcagtttgcttggcaattcgagtaaacacttttctgagt
tgtagccagtatcataaaatgtataggactataaaagcgataacaggaaggcagattttc
cagccactacatgcactccggacagctgaaaagtcccttctgccgggttatcatcaattt
gagtggaaaccacccctgaaaaatgtgtctagtaatacagaagtaggcattatagatgga
ctttcaggcatacaacatttggttgatgattacccagtagacaccattgcaaaaagattt
cgatatgatgttgccttggtgtctgccttgatggatatggaagaagacatccttgaagga
ctaaaatctcatgatttggatgattatttgaaagggcccttcactgtagtaatcaaagag
tcctgtgatggaatgggagatgtcagtgaaaagcatggctgtggtccagctgtccctgaa
aaagcagttcgattctctttcacagtcatgaacatcactgtggctcatgggaatgtaaat
ataagaatttttgaagaaaacaagcccaattcagaactgtgttgcaaacccttgtgcctg
atgcttgctgatgaatcagaccatgaaacgttcacagctattttaagtcctcttgtggca
gaaagagaggccatgaaaaacagtgaattgttacttgatatgggtggaattccaagaacc
ttcaaattcatctttaggggcactggatatgatgaaaaacttgtccgtgaagtagagggc
cttgaagcttcaggatctacatatatttgtacactctgcgatgcaactcgcttggaagct
tctcagaacttgatccttcactccataacaagaagtcatgctgaaaacctggagcggtat
gaagtatggaggtctaacccttatcatgaaactgttgatgaactacgtgacagagtaaaa
ggtgtttctgccaagccttttattgagacagttccttcagtagatgcattgcactgtgac
attggcaatgctgctgaattttacaagatatttcagtttgagattggtgaagtatacaaa
aatcctaatgcatcaaaagaagagagaaagagatggcaatcaacgcttgacaaacatctg
aggaagaaaatgaacttaaagcctgtaacaaggatgaatggaaattttgctagaaggctc
atgtcaaaagagacagtagaagcagtatgtgaactcatgcagtgtgaagacagacatgaa
gcactcagagaactcatggacctttaccttaagatgaaaccagtatggcgaacttcatgt
cccagcaaggagtgtccagaattgctacgccagtacagcttcaactctcaacgttttgca
gagttgctgtctacaaaattcaagtacagatatgagggcaagataagcaattacttccat
aaaactcttgctcatgtgccagagattatagaaagagatggttctattggtgcttgggca
agtgaaggaaatgagtctggcaacaaactatttaggcgttttcgaaaaatgaatgccagg
cagtccaagtgctatgaaatagaggatgtcttgaagcaccactggctgtatacctcaaag
tatctgcagaagttcatgaatgctcataatacactaaaaacccaggggatcacaatcaat
ccagaacagagtgtggatgattttattacactggaagactctctgcaaattactgattcc
atggaattttaa
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