Sphaerodactylus townsendi (Townsend's least gecko): 125426469
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Entry
125426469 CDS
T08213
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125426469 (NPAS3)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125426469 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
125426469
NCBI-ProteinID:
XP_048340714
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All DBs
Position
LG02:136898167..137773425
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AA seq
1034 aa
AA seq
DB search
MSSEAAEPGLSALLGLWTAAARAAAAAAPAALASEQSEATCARTAAPGSGSPPCIGLSTF
PQPACLSRAIAAAAAARHNTTRQHQEGEKITVQHPLPNQSECRKIYRYDGIYCESTYQNL
QALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFAN
QGDPPWNLRMEGPPPNTSVKGIQMWKSEVCMRKTPCEGPGAEGKKEMINESERSMNETWP
KLEAESNTDTKDQKIIGAQRRRSPSALATEVFESHLGSHILQSLDGFVFALNQEGKFLYI
SETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSAS
SSSQSETPEPVESTSPSLLTTDNNLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRL
RVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIVYCENRISDYM
DLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSCATI
AINAKNANEKNVIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDNSED
NENSKSDEKGNQSENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSRDSDDSFENSDF
ETQKAPEDNFGTLGSMQIKVERYVESESDLRLQNTESLTSDSAKDSDSAGEGNAQSSSKH
QKRKKRRKKQKGGSMTRRRLSSTSSPNGLDTALVDQPQLLSSPNSASVLKIKTEISEPIN
FDNDSSIWNYPPNREISRNESPYSMTKPPNSEHFPSPQASSSLHVSIPDSVLTPPGTENT
ASRKSQFSTSSNSALAPVSSDPLSPPLSASPRDKHPGGPSTSNPLLYTGDLEALQRLQAG
NVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNTHAVNFVDVNSP
SFGLDPKTPMEMLYHHVHRLNMSGPFGSAVSAASLTQMPAGNVFTTAEGLFSTLPFPVYS
NGIHATQTLERKED
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggaggcggcggagcctgggctctctgcgctcctcggcttatggacggcggcg
gccagagcagcagcagcagcagcaccagcggcgctagcgagcgagcagagcgaagcgacc
tgcgccaggaccgctgcgccggggagcgggagcccgccatgcattggcctcagtactttt
cctcagcctgcctgtctaagcagggccattgccgccgccgccgccgctagacacaacacc
acacggcaacaccaggagggggaaaaaataactgtccagcatcctctgcccaaccaatca
gaatgtaggaaaatctacagatatgacggaatctactgtgaatctacctaccagaattta
caagccttgagaaaggaaaagtcccgagatgctgctcgttctcgccgagggaaggaaaat
tttgagttctatgagctggccaaattgttgccacttcctgcagccattaccagccagctt
gacaaggcatccatcattcggctaacaattagctatttgaagatgagggactttgctaat
cagggggatcctccttggaacttgagaatggaaggaccaccacccaacacatcagtaaaa
gggatacaaatgtggaaatctgaggtctgcatgagaaagacaccatgtgaaggtccagga
gctgaaggcaaaaaagaaatgataaatgaatctgagagatctatgaatgaaacatggcca
aaactagaagcagagagtaatacagatacaaaggatcagaaaattataggtgcccagcgc
aggagaagccccagtgcacttgccactgaagtatttgagtcacatttgggaagtcacatt
ttacagtccctggatggatttgtatttgcactaaaccaagagggaaaatttttgtacatt
tcggaaacggtctccatttatctaggcctatcccaagtggaactgacaggcagcagcgtg
tttgactacgtccacccaggagaccatgtggagatggcagagcagctgggcatgaagctt
cccccggggcgaggcctcctctcacagggaacagcagaggacggagccagctcagcatct
tcatcttctcagtctgagacccctgagccagtggaatccacaagccccagcctacttacg
acggataacaatctagagagatcttttttcatccggatgaaatctaccctgaccaagcga
ggcgtgcacatcaaatcctcaggatataaggtgattcatataacaggaaggttgcgcctg
agagtctcgctgtcccatgggcggacagtccctagccaaatcatggggcttgtagttgtt
gctcatgctttgccccctcctacaatcaatgaagtcagaatcgactgccacatgtttgtt
acgcgagtaaacatggacctcaatatcgtatactgtgaaaataggattagtgattatatg
gatcttactcctgtagacattgtagggaagagatgttaccacttcattcacgctgaagat
gtggaagggatcaggcacagtcacttagatttgctgaacaagggtcagtgtgtaacaaaa
tactaccgctggatgcagaagaatgggggttatatatggatacagtcttgtgccaccatc
gctatcaatgctaagaatgcaaatgagaaaaacgtcatctgggtcaattaccttctgagc
aaccctgaatataaggacaccccaatggatattgcacaacttcctcatctgccagagaaa
acctcagaatcctctgagacgtcagattctgaatcagattcaaaggacaactcagaagac
aatgaaaattcaaagtcggatgagaaaggaaaccagtcagaaaacagtgaagaccctgag
tcagataggaagaagtccgggaatcagtcagataatgaaatgaactgtaatgatgatggg
aacagttccagcaatcaggatagcagagacagtgatgacagctttgaaaattctgacttt
gagactcaaaaggcccctgaagataattttggcactctgggttctatgcagataaaggtg
gagcgctacgtggaaagtgaatctgacttgcggttacaaaacactgaatcattgacctca
gatagtgccaaggactcagacagtgcaggagaaggaaatgctcagtcttccagcaaacat
caaaagaggaagaagaggagaaaaaagcaaaaaggaggcagcatgacccgcagaaggctg
tcaagcacttcaagccccaatggactcgacacagcattggtggatcagccacagctgctc
tcatcaccaaacagtgcctcagtgctcaaaatcaaaacagagatctcagaacctatcaat
tttgataatgatagcagtatttggaattacccacccaacagggaaatctcaaggaatgaa
tcaccctacagtatgaccaagcccccaaactcagagcacttcccctcaccacaagccagc
agtagtttacatgtctccattccagactctgttctcaccccaccaggaactgaaaatact
gccagccgcaaatctcagttcagcacctcatccaactcagccttggctcccgtatcctct
gaccctttatcgccaccgttgtccgcatctccacgggacaagcatccaggaggccccagc
acttccaaccctttgttgtacactggtgatctggaagccctccagaggttgcaagcaggc
aatgtggtccttcctttggttcacagggtaactggaacccttgctgccaccagcacggct
gctcagagggtctataccactggcactattcggtatgctccagctgaagttactttagct
atgcagggcaatctcctccccaacactcatgctgttaacttcgtggatgttaacagcccc
agcttcggcctggatcctaaaacaccaatggaaatgctctaccaccacgttcaccgactc
aatatgtcaggaccgtttggaagtgctgtgagcgcagccagtctgacccaaatgcctgca
gggaatgtgttcacaactgccgaaggactcttctctactcttccttttcctgtgtacagc
aatggtattcatgccacacagacactggaacggaaagaggattga
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