KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125426706
Entry
125426706         CDS       T08213                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125426706 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stow03400]
    125426706 (TDP1)
DNA repair and recombination proteins [BR:stow03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125426706 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 125426706
NCBI-ProteinID: XP_048341304
LinkDB
Position
LG02:152051473..152091938
AA seq 600 aa
MSQESEHGKWTVSSSDESVDEDAGCEEPSTSLLQGAGRDKVTEPSYSCSEARKAAHKRKS
SPLQFQDENSLSEVPPAPKRLSQEGSGWCLSSSEEEDDCKGKDVKKSDAVASSVRQKEDC
APQDLAKDELPLNHKSAEPPNEVQDTWDLLDGGNPFRFFLTKVRGIKSKYNAGALHIKDI
LSQLFGTLVSSAQFNYCIDVEWLIRQYPKEFRDKPLLIVHGEKRESKADLYEQAKPYKNV
SFCQAKLDIAFGTHHTKMMLLCYEEGLRVVIHTSNLIEDDWYQKTQGIWLSPLYPKLPPG
TPGSAGESCTNFKSDLISYLMSYKSPALNEWVEVIKQHDLSETRVYLVGSTPGRYQNNEK
EKWGHLRLRKLLKDHAVQVPDENSWTVIGQFSSIGSMGPDQSKWLCSEFRQSLVTLGNSA
KTLTNQEVPINLIYPSVDNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSFFHKWSAETSGR
SHAMPHIKTYMRVSPDFQRIAWFLVTSANLSKAAWGAFEKNGAQLMIRSYELGVLFLPSE
FGLDTGYFQVKENLLSDEPASFPVPYDLPPEKYESKDHPWIWNIPYTKAPDTHGNMWVPK
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtcccaggaaagcgagcatgggaaatggacggtgtccagtagcgatgagagtgtagat
gaggacgccggttgcgaggagccctcgacctctttgctgcaaggggctggtcgggacaaa
gttaccgaaccgagttactcttgttcagaagccaggaaggcagcccacaagaggaaatct
tcccctctgcaatttcaggatgaaaattccctgtcggaggtaccgccggccccaaagaga
ctttctcaagaaggttcgggttggtgcctttcgagtagtgaagaagaggatgattgcaaa
ggcaaggatgtaaagaaaagcgatgcagtagcctccagcgtccgacagaaagaggattgt
gctcctcaggacctggcaaaggatgaacttccactgaaccacaaatctgccgagccgcca
aatgaagtgcaggacacttgggatctgttggatggagggaatccttttagatttttcctc
accaaagtacgaggaatcaagtccaaatacaatgctggagccttgcatataaaagacatt
ttgtctcagctttttggaacccttgtgtcatctgctcagtttaactattgtatagatgtg
gaatggcttatcagacagtacccaaaggaattcagggacaaacctttgctaatagtccat
ggggaaaaacgagaatccaaggctgatctgtatgaacaagctaagccctataaaaatgtt
agcttctgccaggctaagttggatattgcctttggaacccaccacaccaagatgatgttg
ttgtgttatgaagaaggcctccgtgttgtgatacatacgtccaatcttattgaagatgac
tggtaccagaaaacacagggcatatggctaagtcctttatatccaaagctaccccctgga
actcctggctctgctggtgaatcttgtaccaattttaagtcggatcttatcagttatttg
atgtcatacaagtccccagctctcaatgaatgggttgaagtaatcaagcaacatgatctt
tcagagaccagagtatatcttgttgggtctactccaggtcgataccaaaacaatgaaaaa
gagaaatggggtcaccttaggctaagaaagcttttaaaagatcatgcagtgcaagtacct
gatgaaaattcttggactgtaatagggcagttctcaagtattggatccatgggacctgac
caatccaaatggctgtgttcagagtttagacaaagtttggtcactctaggaaacagtgcc
aagactctgacaaatcaggaggttcccattaatctgatttatccctctgtggacaacgtg
aggcaaagtttggaaggttatccagctggtggttctcttccatatagcatacagactgca
cagaaacagctttggctccactctttcttccacaaatggtcagctgaaacgtccggtcgt
agccatgccatgcctcatattaagacttatatgagagtttctccagacttccaaaggatt
gcatggtttttagttacaagtgccaatctttccaaggctgcttggggagcatttgaaaaa
aatggtgcccagctgatgattcgatcgtatgagctaggagtcctcttcttgccttcagaa
tttggcctggatactggttatttccaggtaaaggaaaacctgctttctgatgagccagca
tcatttcctgtaccttatgatctgcccccggagaagtatgaaagtaaagatcatccatgg
atttggaacattccttacacgaaagctccagacacacatggaaatatgtgggtccccaaa
tga

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