Sphaerodactylus townsendi (Townsend's least gecko): 125427165
Help
Entry
125427165 CDS
T08213
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04140
Autophagy - animal
stow04148
Efferocytosis
stow05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125427165 (VPS18)
04148 Efferocytosis
125427165 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125427165 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125427165 (VPS18)
Membrane trafficking [BR:
stow04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125427165 (VPS18)
Hops complex
125427165 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_Vps41
zf-C3HC4_2
DUF2229
DUF5600
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf_RING_Vps8
zf-ANAPC11
zf-rbx1
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
125427165
NCBI-ProteinID:
XP_048342227
LinkDB
All DBs
Position
LG02:complement(125873830..125884953)
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDDYQDSISNMASSQQIRGSLGIPHTGYVNARLEKETHIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDIIFRLDLAKADEPNQVELGRKDEAKVHKLFLDHTGSHLVIALNTSE
CLYLNRNAQKVRPLSRWKGHLIESVGWNKILGSETNTGPILVGTSQGHIYEAEISITEGG
LFGTTPDQYFRFIYNLEEEAGPAPVCCLEMERGIDGKCFIIATTRKRLFQFVGKIPEGTD
PQGFGAIFNMPSNHLPGFREFPASFGYSEIAFYTPKLRSSPNAFAWMMGNGVLYGSLDYG
RPDSILSDEQVWEYPSDVDVTVNKPISIVLTQFHFLLLFPDQVKAVCTLNGQVVFQDMFL
DKFGSLTRMIKDPSYGQIWIHTEKVVFRYNVQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNKRYLDSAKCYAMTQNYFEEIALKFIEAKQEEALMEFLLKKLASL
KSSEKTQTTLLTIWLTELYLNHLGMLEGDPSKQSLYVKTRDNFRSFLGSPKNKDCLLNNR
TTIYELLASHGDTENMVHFAVLMHDYERVIAHHCQHDNYSAALKVLSKIRDEALFYKFSP
VLIQHIPTMVVDAWIEMGKQLDARNLIPALVNYSQSGSTKQISEAIRYLEFCVYELKETH
QAIHNYLLSLYAVCDPKSLLVYLENAGSYSDKIHCDLKYALRLCAEHGHHQACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAKRIREDIQEM
RNKYGSVESQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQEVYPNLPAYKQAKLEDLQK
KLSATGQPSKSHHRPKDTDMSGQGKGQPTREQMKADIDDIVAAECVYCGELMIRSIDKPF
IDPQRYESEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattctggacgactaccaggactccatctccaacatggcctcttcgcagcag
atccgcggcagcctgggcatcccgcataccggttacgtgaatgctcggctggaaaaagag
actcacatttttaacaaacagaggattgacttcactcctcctgaaaagattaacagcctg
gtggtctcctctaaccagctatgtatgagtcttgggaaagacatcatttttagacttgac
ctggccaaagcagatgaacctaaccaggtggagcttggaagaaaagatgaagccaaagtt
cacaagttgtttctggatcacacaggttctcaccttgtaattgccctgaacaccagcgaa
tgcctctatttgaaccgaaatgctcagaaggtgcgacccctgtctcggtggaaaggtcac
ttgattgaaagtgtaggttggaacaagatcttgggctcggagaccaacactggcccgatt
ttagtgggaacatcccaaggacacatatatgaagctgagatttctatcactgagggtggc
ctctttggcacaacccctgaccagtacttccgctttatttacaacttggaggaggaggca
gggcctgccccagtgtgctgtctagagatggaacgaggaattgatgggaaatgttttatc
attgccaccactcgtaagagactcttccagtttgttggtaagattccagaagggactgat
ccacaaggctttggagccatatttaatatgccttctaaccatctgcctgggttccgtgag
tttcctgccagctttggctacagtgagatagcattctacactccaaaacttcgctcttct
ccaaatgcttttgcttggatgatgggaaatggcgtcttgtatggatcgctggactatgga
cgtcctgactctattctgagtgacgagcaagtctgggaatatccttctgatgtcgatgtt
actgtcaacaagcccatctccatagtgcttacacagttccatttcctgctgctgtttcct
gatcaagtgaaggccgtctgcactctgaatggccaagttgtcttccaggatatgttcctg
gataagtttggctctttaacacgtatgatcaaagatccctcatatggacaaatctggatt
cacacagaaaaggtagtgtttcggtacaatgtgcagcgagagtcccgagatgtgtggaag
atgtacatgaacattaacaaatttgatttggccaaagagtattgcaaggaccgtcccgaa
tgtctggatattgtcctggcaaaagaggcagaatactgcttccagaacaagagatacctg
gacagtgccaagtgttatgccatgacccaaaattattttgaggagattgcccttaaattt
attgaagccaagcaggaagaagcattgatggagtttctccttaagaagttggccagcttg
aagtcctcagaaaagactcagaccactctgctgaccatctggctaacagaactttattta
aatcatctgggaatgctggaaggggatccctcaaaacagagcctctacgtgaagactcgg
gacaatttccgcagttttttgggtagccccaaaaataaagactgcctgttaaacaaccgg
acaaccatttatgagctgttagccagccatggggacacagaaaatatggtacactttgct
gtcctcatgcatgactatgaacgggtgatagcccatcattgccagcatgataactacagt
gcagccctaaaagtcttgtctaaaatcagggatgaggcgcttttttacaagttttctcct
gtcttgatccagcacatccccacgatggtggtagacgcttggattgaaatgggcaagcaa
ctggatgccaggaacctcatccctgcccttgtcaactacagtcagagtggcagcactaag
cagatcagcgaagccattcgatatctggagttctgtgtgtacgagctgaaggaaactcat
caggccattcataactacctgttatcactctatgctgtgtgtgaccctaaatcattgttg
gtctatctggaaaatgccggatcctactcagacaagatccactgtgacctgaagtatgcg
cttcggctatgtgcagaacacggccaccaccaagcttgtgtccatgtatataaagttatg
gagatgtatgaggaggctgtggatctagctttgcaggtggatgtggatatggcaaagtcc
tgtgcagacctccctgaagatgatgaagagctgcggaagaagttgtggctgaaaattgct
cggcatgtggtccaggaagagaaggatgtgaagaaggccatggcctgcctttccagctgc
aacttgttgaagatagaagacgttctgccattctttccagactttgtcactattgaccac
tttaaggaagccatttgcaactctctggaggcctacaacaagcacatagaagagctgaag
acagaaatggaagaagcaacacagagtgccaagaggattcgggaagacattcaggagatg
aggaataaatatgggtctgtggagtcccaggaaaaatgtgcagcttgtgactttcctctt
ctaaatcgccccttttatctcttcctctgtggccacatgttccactacgattgccttctc
caggaggtctatcccaatttgccggcctataagcaggctaaattggaggaccttcagaag
aagctttcagccacaggccagccttccaaatcccaccatcgccctaaggacacagacatg
tctggccaaggaaaaggccagccaactcgggaacaaatgaaagctgacattgatgatatt
gtggcagctgaatgcgtgtactgtggagagctaatgatccgatcaattgacaagcctttt
attgatccacagagatatgaatcggagatgcagagttggctgtag
DBGET
integrated database retrieval system
