Sphaerodactylus townsendi (Townsend's least gecko): 125427183
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Entry
125427183 CDS
T08213
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125427183 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125427183 (XRCC5)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125427183 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
125427183
NCBI-ProteinID:
XP_048342260
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Position
LG02:63810624..63863448
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AA seq
726 aa
AA seq
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MSRSKSAIVLCMDVGSSMSNIVPGEESPFDQAKKVMTLFVQRQVFAESKDEISLVLFGTD
GTENSLASEDQYQHITVRRHLFLPDFDLLEDIQNLIQPGSGQGDILDALIVCMDLLQKET
IGKKYDKRHIEVFTDLSSPFSEDQLDIIVNNLKKTGISLQFFLPFPVNSKDGSGDANDEA
HSSRHQNSFPRKGLTEQQKEGLLMVKRLMFALDKEDGLEDIYTFRDSQERLSMFKKIELR
SMAWPCQLTIGSKLSIRIIAYKSITEEKVKKSWMVVDAKTLKKEDVQKETVHCLNDDDET
EVQKDDIIQGFRYGSDIIPFSKIDEEQMKYKTDGKCFAVLGFSRSSQILRHHYMGNQVLK
VFAAKDDEAAAVAFSALIHALDELDTVAIVRYVYDRRSNPQVGVAFPLIKDQYECLVYVQ
FPYMEDLRQYMFSSLKNNKKCTPTEDQLCAVDSLIDSMNLVYEDEREEAMEDIFKTSKLP
NPQFQRLFQCLHHKAFHPDAPLPPIEKYLKDMLETPQEVMEKCQAPLQKLKSLFPLKDVG
KIKEQKTAQSIFKSEDGPDAKKAKIEDDEGDFNIGNLAEGNITSVGSVNPTENFRVLVRQ
KNANFQEVSQQLINHIYQFLENRELYYMKTISCIKVFREEAVKLSQVQHFNDFLEALKKR
VEDKNLTDFWEIIIQDDISLITNEEAEGSSVTVEDAKKFLAPKEKSMEISPVADEGGDVD
DLLDMI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtcgaagtcagccatagtcctgtgtatggatgttggctcttcaatgagtaac
attgttcctggagaagagtctccttttgaccaagcaaagaaagtgatgaccctgtttgtg
caacgacaggtgtttgctgagagtaaagatgaaatttccttggttttatttggcacagat
ggcactgaaaactctctagccagtgaggatcagtatcagcatattactgtacgcagacac
ctgtttctgccagattttgatttgttggaagacatacaaaatttgattcagccaggctct
ggacaaggagacattcttgatgctcttattgtgtgcatggacttgcttcaaaaggaaaca
atagggaaaaagtatgacaaacggcacatagaggtttttactgaccttagcagtcccttc
agtgaggatcagctggacattattgtgaataacctgaagaaaactggaatttcactgcag
tttttcttgccatttccagtgaacagcaaagatggaagtggggatgcaaatgatgaggca
cattccagtaggcatcagaattcttttcccaggaagggtctaactgagcagcaaaaagaa
ggccttctaatggtgaagaggctcatgtttgcattagacaaagaagatggtctagaggac
atttatactttcagggatagtcaggagcgcctttcaatgtttaagaagattgaactgagg
tcgatggcttggccctgccagctcaccattggttctaaactgtctataaggatcatagcc
tataaatcaatcactgaggagaaagtgaagaaaagctggatggtggtagatgccaagaca
ctaaaaaaagaggatgtgcaaaaagaaactgttcactgcttgaatgatgatgatgaaaca
gaagttcagaaagacgatattattcaagggttccgctatgggagtgatatcattcctttc
tctaaaattgatgaggaacagatgaaatataaaacagatggaaaatgttttgctgtcttg
ggattcagcagatcctctcagatcctgagacatcactacatggggaaccaggttctgaaa
gtatttgccgctaaggatgatgaggctgctgcagttgctttttctgccctgattcatgct
ttggacgagctggatacggtggccatagtgcgttatgtctacgatagaagatctaatccc
caggttggggttgcttttccattaattaaggatcaatatgagtgtttagtatatgtgcag
tttccttacatggaagatctgaggcagtacatgttttcctccttgaaaaataacaaaaaa
tgcactccaacagaggaccagttgtgtgcagttgactccctgattgattctatgaacttg
gtttatgaagatgagagagaagaggcaatggaggatatatttaaaaccagcaagctccca
aaccctcaattccaacgattgttccagtgcctgcaccacaaggcctttcatcctgatgca
cctctgcctcctattgaaaagtacctcaaagacatgctggagacacctcaagaagtgatg
gagaaatgccaggcccctcttcaaaaactgaaatcactcttccccttgaaggatgtgggc
aaaataaaagagcaaaagacagctcagagtatcttcaaaagtgaagatgggcccgatgca
aaaaaggcaaaaattgaagatgatgaaggtgacttcaacattgggaaccttgcagaaggc
aacatcacatcagtgggaagtgttaatccaacagaaaacttcagagttctggtgaggcag
aagaatgctaacttccaggaagtcagtcaacagctgataaaccacatctaccagtttttg
gaaaacagagagctgtactatatgaagaccatcagttgcataaaagttttcagagaggaa
gctgttaagctgtcacaagtgcagcactttaacgattttctagaagccttgaaaaaaagg
gtggaagataaaaacttaactgatttctgggagatcataatacaagatgacatctccttg
attaccaacgaagaagctgaaggaagttctgtgacagtggaagatgccaaaaagttcctt
gctcccaaagaaaagtccatggaaatttcaccagtggcagatgaaggtggcgatgttgat
gatcttttggacatgatataa
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