Sphaerodactylus townsendi (Townsend's least gecko): 125427280
Help
Entry
125427280 CDS
T08213
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125427280 (PRPF39)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125427280 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_15
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
125427280
NCBI-ProteinID:
XP_048342445
LinkDB
All DBs
Position
LG02:complement(182486747..182514705)
Genome browser
AA seq
570 aa
AA seq
DB search
MQSEDPKEDKSPEKSEAMGKASEAEPEQLADFSTEIMSVTEMEQSPENSPGTPPQEEEPQ
DSEMAEEEATATASPVEPSFPPEFEKFWKVVETNPQDFTGWVYLLQYVEQENHLLAARKA
FDSFFTHYPYCYGYWKKYADLEKRHGNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETL
DTSDPETVGTIRGTYEHAVLAAGTDFRSDKLWEIYVNWENEQGNLKAVTAVFERILGIPT
QLYSHHFQRFKEHVQNNLPRDILTTEQFVQLRRELASSANSHGGEDPPPGDDLPSGTEDI
TDPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKTQLKNW
KEYLDFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVYSRACTIH
LSKKPMVHLLWAAFEEQQGNINEARRILKTFEENVSGLAMIRLRRVSLERRHGNLEEAEH
LLQEAVKNAKSSYEASFFAVKLARHLFKIQKSLLKARKVLLEAIDRDGVRSFLKVCRISQ
CFLRGFCVGNCDDLCDSAVRIDVPWRRQSL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgaggatcccaaagaggacaagagccccgagaagagcgaggccatgggcaag
gcctccgaagcagagcccgagcagcttgctgacttcagcacagaaattatgagcgtcacg
gagatggagcagtccccggagaactctcctggcacccctccccaggaagaggagccccag
gacagcgaaatggcagaagaagaggccacagcgactgctagtcctgttgagccttcattc
cctcctgagtttgagaagttctggaaagtcgttgagacaaacccgcaggatttcacaggc
tgggtctatctcctgcagtatgtagagcaagagaaccacttgctggctgccaggaaagct
tttgacagttttttcacacactacccgtattgctacggttattggaaaaaatatgcggac
cttgagaagcggcacggcaacataaagcagtcggatgaggtgtaccggagggggctccag
gctatacctcttagcgttgatctctggatccattacatcaacttcctcaaggagactctg
gataccagtgaccctgaaactgttgggaccattcgagggacctacgagcatgccgtgttg
gccgcagggacagatttccgctctgataaactctgggaaatttatgtcaactgggaaaac
gaacaaggtaacctgaaggctgtcacagccgtctttgaacgcattctggggattccaacg
cagctgtacagccatcacttccaaaggttcaaagaacatgtccagaataacttgccccgg
gacattctgaccactgagcagtttgttcagctgcggagagaactggcatcttctgccaac
agccacggtggagaggacccaccgcctggagatgacctcccttccggaacagaagatata
acagaccccgctaagttaatcactgaaatagaaaacatgcgccacagaattattgagatt
catcaggagatgttcaatcacaatgagcatgaagtgagcaagcggtggacctttgaggag
gcgataaaacggccctatttccatgtgaaacctctggagaaaacccagctgaagaactgg
aaagagtacttggactttgagatcgagaacggcactcacgagcgcgtggtggtcctcttt
gagcgatgcgtgatctcctgtgccctctatgaggagttctggatcaagtatgccaagtac
atggagaaccacagcatcgaaggggtgaggcacgtctacagtcgggcttgcacgatacac
ctttccaagaagccgatggtccacttgctctgggctgcctttgaagaacagcagggaaac
atcaacgaagccagaaggatcctgaagacttttgaagagaacgtttctggactggccatg
atccgtttgcgcagagtgagtttggagcggaggcacgggaacttggaagaggcggagcac
ctcctgcaggaagccgtgaagaacgccaagtcgagctacgaagcctccttctttgccgtc
aaactggcgcggcacctcttcaaaatccagaagtccctcctgaaagctcgcaaggtgctc
ttggaggctatcgacagagacggggtacgttccttcctgaaggtttgccggatatcacag
tgcttcttgaggggcttttgtgttggcaactgtgatgacttgtgtgactctgcagtgcgc
attgatgtgccatggagacgccagtccctctaa
DBGET
integrated database retrieval system
