Sphaerodactylus townsendi (Townsend's least gecko): 125427466
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Entry
125427466 CDS
T08213
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stow01002
]
125427466
Peptidases and inhibitors [BR:
stow01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125427466
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
125427466
NCBI-ProteinID:
XP_048342896
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Position
LG02:complement(30905069..30960077)
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AA seq
1212 aa
AA seq
DB search
MFFRLWWLLFLADHLFLAQNTNEEKRNAVKKQKSKPFLSNAVEKYPSSSDQDEDCILEMA
FLLDSSESAKNFNHEQQKNFVLEIVDRMKGLQLTSGRTLSWKIALLQYSSTVLIEQTFKD
WKGPDAFKSRIAPITHIGHGTYTTYAITNLTQLYMTEGTLGSVKVAVLLTDGVDHPRNPD
IFSATADAKHQGIVFFTVGMTRVAEEVANAAKLRLLASVPASRFVFNLQEKGIVERILNE
MKDLAEEGCPLPPICNCEKGERGLPGPAGKKGRPGDDGATGPKGAKGEPGLNGIPGRDGT
EGKSGYKGEKGERGECGTPGIKGDRGPEGPGGPRGLRGLQGPQGSPGDAGPEGVQGSKGE
RGLPGPAGLTGETGVGLPGPKGDIGITGRPGPVGPPGVGEPGLPGPQGPQGIQGERGSPG
EGLPGPKGDRGFDGPKGPRGQPGIGIKGEKGEIGPPGLPGPIGLPGVGIQGEKGVEGPKG
PPGPRGPPGQGLAGPKGDQGLPGETGAPGERGLGEPGAKGEPGSSGLAGLPGLPGEDGAP
GQKGEPGLPGLRGSEGAPGIGIQGEKGDQGQRGIRGLPGPTGVAGPAGAKGEPGAPGRLG
MPGVPGRAIMGPKGDIGLPGPPGPIGEQGIGIPGAKGDRGHPGPPGPFGPKGDGFPGPTG
LPGLPGAPGEQGPEGIGLSGPKGDPGIRGPVGLPGPPGEGLPGSKGNVGRQGPPGPLGPP
GEGIQGPKGEQGIQGIPGPRGTPGEGLLGPKGDRGAAGERGRKGEKGNVGDPGAAGEPGK
TGTKGEQGLTREDIIKLIKEICGCGIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTAL
VDRVTVGRNATRIGLVLYSLEVRLEFGLNRYTTQQDVKQAIRKMLYMGEGTYTGTAIRKA
TQEGFFGARTGVRKVAIVLTDGQADKREAVKLDFAVREAHAANIEMYAIGIVNASDPTQV
EFLRELNLIASDPDREHMYLIDDFNTLPALESKLVNQFCEDEHGALIYNRLGNGGGINGP
SILSIVSHPSQYLFQTNSNTGQSVSSITYETPMKENSINPEQLSQPLTPAKESPKRLYES
SNTGLNNRSLSPENTEVVTSTSSPPPSSSSSPSSSSSPLPPLPSIPPSKPQSSSHSPASS
LAPTLKPEKTPTPQCKLQLDQGPCRTYIIKWYYDKQANSCAQFWYGGCDGNENRFESEED
CKKTCVFFSGDV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagattatggtggcttttgttcctggctgaccatctatttttggcacaaaat
accaatgaagaaaaaagaaatgcagtgaaaaaacaaaagtccaaacctttcctatcaaat
gcagtagaaaaataccctagctcaagcgaccaagatgaagactgcatcctggaaatggct
ttcctcctggacagctcagagagcgctaagaacttcaatcacgaacagcagaaaaacttt
gtcttggagatagtggacagaatgaaaggactgcaactcacctctggacgtaccctcagc
tggaagatagccttactccagtatagcagcactgttctcatagagcaaactttcaaagac
tggaagggcccggatgcttttaaatctcgcatcgctcccataacccacatagggcatggg
acctacactacctacgcaatcaccaacctcacgcaactgtacatgaccgaagggactctt
ggtagtgtgaaagttgctgtgctgttgacagatggagtagaccatccaagaaacccagac
attttttcagctactgctgatgctaaacatcaaggtattgtgttcttcacagtggggatg
accagagtagctgaggaggtggccaatgctgccaagctccggcttcttgctagcgttcct
gcatccaggtttgtcttcaatctgcaagagaaaggaattgtggaaagaattctcaatgaa
atgaaagatctggcagaagaagggtgtccactgcctcccatatgtaactgtgaaaaagga
gaaaggggtctaccgggtcctgctggtaaaaaaggtcgccctggtgatgatggagctact
ggtccaaagggagctaagggagagccaggcttaaatggaattccaggaagagatgggacg
gaggggaagtctggatacaaaggagaaaagggtgaaagaggtgaatgcggaacaccagga
ataaaaggtgatcgaggcccagaaggtccaggtggtccaagaggactccgagggctccag
ggtcctcaagggtcacctggagatgcagggcccgaaggagtgcaggggtcaaagggcgaa
cgaggcctccctggccctgctggattaactggagaaactggagtaggattacctggccca
aagggagatattggtataacgggaagaccaggtcctgttggcccaccaggggttggagaa
ccaggtttaccgggacctcaaggaccacaaggtattcagggagaaagaggatcaccagga
gaaggtctcccaggtccaaagggagatcgtggttttgatggcccaaaaggtcctcggggg
caaccaggcattggcatcaagggtgagaagggtgaaattggccctcctggtttgcctggg
cccattggattgcccggtgttggaattcaaggagagaagggagtagaaggcccaaaaggc
ccaccagggccaagagggcccccaggacaggggttagctggaccaaagggtgatcaaggt
ttgccaggagaaactggcgctcctggagaaaggggtcttggagaacctggtgcaaagggg
gaaccaggttcttcagggctggcaggcctacctggccttccaggagaagacggtgcacca
ggacaaaagggagaaccaggattgcctggccttcgtggttcagaaggggctcctgggatt
gggatacagggtgaaaagggggatcaaggtcaaagaggtatacgtggactaccaggacca
actggcgtcgctggacctgcaggagctaaaggtgaacctggtgctccaggacgtcttgga
atgcccggtgttccaggacgagctattatgggaccaaagggtgatattggattacctgga
cctcctggcccaattggagaacagggaatagggattcctggtgctaagggcgaccgtgga
cacccaggaccacctggaccattcgggccaaagggagatggatttccaggcccgacagga
cttcctgggcttccaggagcacctggggagcaaggccctgaagggattggattatctgga
ccaaagggtgatccaggtatcagaggaccagttggtctcccaggccccccaggagaaggc
cttccagggtcaaaaggtaatgttggacgacaagggccacctggaccactaggacctcca
ggtgaaggtatccaaggaccaaagggtgagcaaggaattcaaggaataccagggcctcgt
ggaactcctggggaaggacttcttggaccaaagggtgatcgtggagctgcaggtgaaaga
ggaagaaaaggagagaaaggtaatgtgggcgatcctggagcagcaggggaacctggcaaa
actggaacaaaaggagagcaaggcctcacaagagaagatatcattaaactgattaaagag
atctgtggctgtggtattaaatgcaaggagatacccatggagcttgtatttgtgatcgac
agctcggaaagtgttggtccggaaaactttgaaataatcaaagattttgttactgcttta
gtagacagagtgaccgtaggcagaaatgctaccagaatcggtctcgtcctctacagtttg
gaagttcggcttgaatttggacttaatagatacactacccagcaggatgtgaaacaagcc
atcaggaaaatgttatatatgggcgaaggtacttacacggggactgccatccgcaaagct
actcaggaaggatttttcggggcccgaactggtgtaaggaaagttgctatagtcttaacc
gatggccaagcagataagagagaagctgttaagctggattttgctgtccgagaagctcat
gcagccaacattgaaatgtatgcgattggaattgtaaacgcctcggatccaacccaagtt
gaatttttgcgtgaattgaatctgattgcatcagaccctgacagagagcatatgtatctc
atagatgactttaatactcttccagctctggaatccaaacttgtgaaccagttttgtgaa
gatgaacatggtgccttgatatataatcgccttggaaacggaggaggcataaatggacca
tccattctctcaatagtttctcatccttctcaatacttatttcaaactaacagtaatact
ggacagtcggtttcatctatcacatatgaaacacccatgaaagagaattccataaatcct
gaacagctttctcagccattaaccccggcgaaagaatcacccaagagactttatgaaagt
tctaacactggattgaataatcgatccttgtctccagaaaatactgaagtagtgacatca
acatcatcaccaccaccatcatcatcttcatcaccatcatcatcttcttcacctctgcca
ccactgccatcaataccgccatcaaaaccacagtcatcctcccattcgccagcttcttcc
ctagcacctacgctaaagccagaaaagaccccgactccacaatgtaaattacaattagat
caaggaccatgccggacatatataataaaatggtattatgataagcaagctaattcttgt
gctcagttttggtatggtggctgtgatggcaatgagaatcgctttgaaagtgaagaagac
tgcaaaaagacctgtgtatttttctccggagatgtctga
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