Sphaerodactylus townsendi (Townsend's least gecko): 125427552
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Entry
125427552 CDS
T08213
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04620
Toll-like receptor signaling pathway
stow04621
NOD-like receptor signaling pathway
stow04622
RIG-I-like receptor signaling pathway
stow04623
Cytosolic DNA-sensing pathway
stow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125427552 (IRF7)
04621 NOD-like receptor signaling pathway
125427552 (IRF7)
04622 RIG-I-like receptor signaling pathway
125427552 (IRF7)
04623 Cytosolic DNA-sensing pathway
125427552 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125427552 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125427552 (IRF7)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125427552 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125427552
NCBI-ProteinID:
XP_048343066
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Position
LG02:complement(77258686..77285869)
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AA seq
624 aa
AA seq
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MQEDFQKCTRFIIRQLSQATMSASANAKGSQKPRFFDWLVNQIDSRAYDGLYWLDENCTT
FRIPWKHKSRKNLVADDYRIFQEWARVGGKYEEGSCDLTRWKTNFRNALMSTKRFELLRD
VKDPDPHHVYKIIPLSAAQEALPPINSNSVSDPADDLLQIKLHSERLPTRPWPAPLPQQE
VEVTLGALSLGNPGPVQNENTSENCYPCTSDTLRWVIEQTNLKLTEAQQISLDPALAEDT
DNPFAAYVQDHCQTVPRVDQSICLPPANGVPNLPVENSYYEPMSIPNVNSQSSVTLALQC
AQQNAIPGLDQFNNVGKAPCNDNCFIQNVFVDDEPQGNGMTMNNTARNDYQMTVNQQAIT
DQNLLVPLDVPCSAEQPTLNTGPLQNNTATVTSHLNISIYYRGKPLHETEVMVNSCMFTY
NKLHDCGPTFGNPQLIQFPNPEELPDQKQMRHTLTLLQNAGLLLYEKNHKIYAKRLDKSR
VYWAFSKQLDNMGQHSQFNGVQKLGPLITCLRRGTETEIFDYKQFWQELKDFHENRRKIS
PDYTIYLCFGQCISAAKPKESLLILVKLVPKKCKEWHEFVLREGASSLSSDMSLHISNSL
MDCIEHESPDVRQLPGCSVPRLVP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggactttcaaaagtgtacacggttcatcatacgtcagctttcccaagccacg
atgtctgcatcagcaaatgcaaaaggctcacagaagccccgtttttttgactggctggtt
aatcaaatcgacagtcgagcatatgatggcttatactggctggatgagaattgtaccacc
tttcgcatcccttggaaacacaagtcaagaaaaaatcttgtggctgatgattacaggatt
ttccaggagtgggctagagttggtggaaagtatgaggaaggttcatgtgacctaaccaga
tggaaaaccaacttccgtaatgccttgatgagtacgaagaggtttgaattactgagagac
gtgaaagatcctgatcctcatcatgtatataaaatcatccctctcagtgcagcacaagaa
gctctccctcctattaattcaaacagtgtgagtgaccctgctgatgatctgttgcaaatc
aaacttcacagtgaaagactcccaactcgtccctggcctgcccctctaccacagcaggag
gtagaagttactttaggagctctgtcactggggaatccaggcccagtgcaaaatgaaaat
acatctgaaaactgctatccatgcacttctgatacactcagatgggttattgagcaaact
aacctgaaactgactgaagctcagcagatctcactggaccctgccctagctgaagacact
gacaatccttttgctgcatacgtacaagaccattgtcagacagtccctcgtgttgaccaa
agtatttgcctgccaccagcaaatggagttccgaatctgcctgtggagaatagctattat
gaacccatgtccataccaaatgtaaattcccagtcatcggtcacacttgcactgcagtgt
gctcaacaaaatgccattcctggtctagatcaatttaacaatgttgggaaagcaccgtgc
aatgacaactgcttcatccaaaacgtttttgtggatgacgaacctcaaggaaatggcatg
acaatgaacaacacagctaggaatgactatcaaatgacagtaaaccagcaagctataaca
gatcagaacctacttgtgcctcttgatgtcccttgttcagcagaacagcccaccctcaac
actggtccgttgcagaacaatacagcaactgtcacctctcatctgaacatctccatctac
taccgtgggaaaccactgcatgaaacagaagtgatggtgaacagctgtatgttcacctat
aacaagcttcatgactgtggccctacttttggcaacccccagctaatacaatttccaaac
ccagaggagcttcctgatcagaaacaaatgaggcataccttgaccctgctgcagaatgca
ggcttgctgctgtatgaaaagaaccataagatctatgccaaacgactggataaaagtaga
gtctattgggcattctctaaacagctggataacatgggtcagcattcacaattcaatgga
gtacagaaactgggacctttgattacatgcttgcgacggggtacagaaacggagatcttt
gactacaagcagttttggcaagaactgaaggatttccatgaaaatcgaagaaaaatctct
cctgactacactatttacctgtgctttggccagtgcatctctgcagccaagccaaaagag
tccttactgatcttggtgaagttggtgcccaagaagtgtaaagagtggcatgaattcgtg
ctgagggaaggagcctcatctttaagcagtgacatgagcctacacatttctaacagcctg
atggattgtatagaacacgaatcaccagatgtaaggcagctacctggatgctctgtgccc
cggcttgttccttga
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