Sphaerodactylus townsendi (Townsend's least gecko): 125427647
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Entry
125427647 CDS
T08213
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04517
IgSF CAM signaling
stow04520
Adherens junction
stow04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125427647 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125427647 (AFDN)
04530 Tight junction
125427647 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
125427647
NCBI-ProteinID:
XP_048343139
LinkDB
All DBs
Position
LG01:complement(90032185..90177595)
Genome browser
AA seq
1927 aa
AA seq
DB search
MSGGGGGSSSREEERRKLADIINHWNANRLDLFEISPPTEDLEFHGVMRFYFQDKAAGNF
ATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQ
LNWNKDDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREK
EALRQALDDRPYHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQE
FRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYC
IARVMLPPGAQHSDDKGAKESILDDDECPLQIFREWPSEKGILVFQLKRRPPDYVPKKSK
KQIDGKPLKGKERVDGSGYGSSLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKP
KLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETFVEGQL
ISETTMLQSGMKVQFGASHVFKFVDPIQDHIPKGRLDTGHMVKGTRHKAGTVQETTFDLE
GDIHSGTGLPASKSTNRLDSDRISTSSTAERGMVKPMIRIEQQQDYRRQDGRSQDAHGPE
LILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSHYRPDISPAE
RTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSPEDIPSINSTCFKLNSLQLHALLQNYHCAPDE
PFIPTELIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNG
LQEFLDPLCQRGFCRLIPHPRSPGTWTIYFEGADYESHLLQDNADLAQPLRKEPEIIAVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAAEVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSAQNGSPESPQLPWTEYNEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGTKNAYVA
GTANKITSVSTGNLCTEEQMLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWSN
YEEKPQVQTENNHYISTAMQRVTRSQEELRDDKVYQAERNRLEVIIRKDVEYIDRKSDSD
PWMNSSVDSSTSSQEHLNHSTKSLPPGSCLTKSGPGRWKTPVVSQSVSLAASQSARTDLP
PPPPPPPVHYAADFDGLQMDLPLPPPPPSSSQLGPQSSSQVAAAERKKREEHQRWYEKEK
ARLEEERDRKRREQERKLGQMRAQPLIPTQTILPPVTVQQVKPEKPSTLQRSQETVIREL
QPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQ
DLQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDEDDEEDDDVDTMLIMQRLEAER
RARQTAMPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKREAEQK
RRQEEEYYNRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYEFPPLPPSSNAPPPPPQ
RNTSYLKTQVLSPDTIYTAKFVAYNDDEEEDSCLAAGQDKYSSARKSYGDLPPATPKSQQ
SSRQPRPASDGIFLSNSFQPSSVNANSTGSKLSHPPPIPNKPSFINPSNAKGSNSYTGST
GAIAGSQESYLDPRDKKSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMEL
ENELNTK
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggcggcagcagcagccgggaagaggagcggcgcaaactggccgac
attatcaaccactggaacgcgaaccggctggacctgttcgagatcagccccccgactgag
gatttggaattccatggagttatgagattttattttcaagacaaagcagctggaaatttt
gcaactaaatgtatccgtgtgtctagcactgccacaacacaggatgtaatagaaacactt
gcagagaaattccgtccagatatgcgaatgttatcatcacctaaatactcgctttatgaa
gtgcatgtcagtggagaagaaagaagattggatatcgatgagaaacctcttgttgttcag
ttaaattggaacaaggatgatagagaaggacggttcgtactcaagaatgaaaatgatgca
cttcccccaaagaaggctcaaagcaatggccctgaaaagcaagaaaaggagggagtgatc
cagaacttcaaacgaactctatcaaagaaagaaaagaaggaaaaaaagaggcgagagaaa
gaggcattgcggcaagctttggatgatagaccatatcatggggatgatattgagaattct
cgtcttgcagcagaggtctataaagatatgcctgagacaagtttcactcgcacaatatcc
aatccagaggtggtaatgaaacgacggagacagcaaaaacttgagaagaggatgcaagag
ttccggagctctgatggcaggccagactcaggtggaacactgaggatttatgcagacagt
ttgaaaccaaatataccatacaagacaatcctgctatctaccacagacactgcagatttt
gctgttattgaagctctggagaagtacggtttggaaaaggaaaatcccaaggattactgt
attgctcgtgtgatgcttcctcctggtgctcaacattctgatgataaaggtgctaaagaa
tccattctggatgatgatgagtgcccacttcagatattcagagaatggccaagtgagaaa
ggaatattagtctttcagttgaaaagacgaccacctgattatgtcccaaagaagtcaaaa
aaacaaattgatggaaagccattaaaaggaaaggaaagagttgacgggtccggttatggc
tcttcccttcctccagaaaaactaccttatctggttgaattaagtccagggagaaggaat
cactttgcctactacaactatcacacttatgaagatggttccgattccagagataaacca
aagctctatcgtttgcagttaagtgtgactgaagttggtactgaaaaatttgatgacaac
tctattcagttgtttggtccaggaattcagccccatcactgtgacctcactaatatggat
ggagttgttactgttactccaagaagcatggatgctgagacatttgtggagggccagctg
atttcagagaccactatgctgcaaagtggtatgaaggttcagtttggggcctctcatgta
tttaagtttgtggaccccattcaggatcatattcctaaaggacgtctagacacagggcat
atggtcaaaggaacacgacacaaagctggaactgtacaagaaacaacatttgatttggaa
ggagacatccatagtggaacaggattacctgcaagcaagagcaccaatagactggatagt
gatagaatatcgacatccagcacagctgaacgaggcatggtgaagccaatgataagaata
gaacagcagcaggattaccggaggcaagatggcagatcacaggatgcacatggacctgaa
ctgatactacctgcaagcattgaattcagggaaagctctgaagatgcctttttgtctgcc
attataaattataccaatagctcaacagttcattttaagctgtctccaacttatgtcttg
tacatgacatgccggtatgtattgtcgagccactacagacctgacatcagtcctgctgag
cgtactcacaaagtaattgcaatagtgaacaagatggtgagcatgatggaaggagttata
caggaggtagaccaggttgatcagaagcagaagaatattgcaggggcacttgctttctgg
atggcaaatgcatctgagctgctaaacttcataaagcaggatcgagaccttagccgaatc
acattagatgcacaagatgttttggcacacttagttcaaatggcgttcaaatatctggtt
cattgccttcagtcggagcttaataactacatgcctgcatttcttgatgatccagaagaa
aataatcctcagaggcctaaaatagatgatgtcttgcatacgctaactggagccatgtcc
ctgctgcgacgctgtagagtgaatgctgcactaactatacagctcttttcccagctcttt
cactttatcaacatgtggctttttaacagactggttactgatccagattcaggattgtgt
tcacattactggggagccatcatccgtcagcagctgggacatattgaagcttgggctgaa
aaacaaggcttggagctagctgctgattgtcaccttagcaggatagtacaagcaactaca
ttacttaccatggataagtattcacctgaagacattccaagtattaacagtacctgcttt
aaacttaattctcttcagctgcatgcactgctacagaattatcattgtgccccagatgag
ccatttattccaacagaattaatagaaaatgtcgttgctgttgctgaaaatactgctgat
gaactggctcgtagtgatggtagggaagtgcaacttgaagaggatcctgatctacaacta
ccttttcttctgccagaagatggctattcatgtgatgtggttagaaacattccaaatggg
ttacaagaatttttagatccactttgccaaagaggattttgcaggttaatacctcatcca
cgctcaccaggaacatggacgatatattttgaaggtgcagattatgaaagccatctatta
caagacaatgctgatctggctcaaccattaagaaaggaacctgagataatcgctgtaacg
ctgaaaaaacaaaatgggatgggtctgagcattgtggccgcaaagggtgctggtcaagat
aaacttggaatctatgtgaagtctgtagtcaaaggtggtgctgcagaagtggatggtcgg
ctggctgctggggatcagttgcttagtgtggatggacgcagtttggttggactatcccaa
gaaagggcagcagagctgatgacaagaactggatctgtggtgacactagaagtagcaaaa
caaggagcaatttatcatggtctagcgactctgcttaaccagccatcaccaatgatgcaa
agagtttcagaccgccgtgggtcaggcaaaccccgaccaaagagtgaaggttttgagctg
tataacaattctgctcagaatggatcacctgagagccctcaactgccttggacagaatat
aatgaaccaaaaaagttgccaggagatgacagactaatgaagaatcgagcagatcaccga
tccagtcccaatgtagcaaatcaacctccaagtcctgggaccaagaatgcttatgtggct
ggaacagctaacaaaataacatcagtctctactggaaacctttgtacagaggaacaaatg
ctaccacccagacctgaagcatatcctatcccaacacaaacttacaccagagaatatttc
acattcccagcctccaagtcccaagatagaatgggtcctgctcaaagtcaatggtcaaat
tatgaagagaaacctcaagttcaaacagaaaataatcattatatcagcactgcaatgcag
cgtgtaactcgttctcaggaagaactgcgggatgataaagtttatcaggcagaaaggaat
cggttagaggttataatacgaaaagatgtggaatatattgataggaaatctgatagtgac
ccatggatgaactcttctgtggattccagtacatcaagccaagagcatctgaaccattcc
actaagtccctcccccctggatcttgtttaaccaaaagtggacctggccgctggaaaact
cctgttgtgtctcagtcagtatcactagcagcttctcagtctgctagaacagaccttcca
cctcctccccctcctcccccagtgcactatgcagctgactttgatggactgcagatggat
ttgcctcttccaccacctccaccttcttcaagccagttagggccacagtcatcatcccag
gttgctgcagcagagagaaaaaagagagaagagcatcaaaggtggtatgagaaagaaaaa
gcacgcttagaagaagagcgtgacaggaagcgtcgggaacaggaacgaaaactggggcaa
atgcgagcacaaccactaattcctactcaaaccatacttcctccagtgacagttcagcag
gtaaaaccagaaaagccttcgacattgcagagatcccaggaaactgtcattagagaactg
cagcctcaacagcagccccgaactattgagcgaagagatctgcagtacatcaccataagc
aaagaagagctgtcctctagtgatagcctgtcccctgacccttggaaaagagatgctaag
gagaagctggagaaacagcagcaaatgcacattgtggacatgctgagcaaagagattcaa
gaccttcaaaacaagccagatcgtactgcggaagagaatgaccgcctgcgaaagctcatg
ttggagtggcagtttcagaaacggctccaagagtcaaagcaaaaagatgaggatgaagat
gatgaagaggatgatgatgtagacaccatgttgatcatgcagcgtctggaggctgagaga
agagcaaggcagactgctatgccagcaatctctgttctagatttgctacaggatgaagag
cgcagacgacagcagcagttggaagagatgcgaaaacgagaagcagaagacagagctcgg
caggaagaagagcgcaggcgccaagaggaggagcggacaaagcgagaggcagaacaaaag
aggcgacaggaggaagaatattacaatcgcctggaggctgaaagacgccgtcaacacgat
gaggcagaacggagattgctggaacccgatgagcctggtctgtacagacctccgcttcca
cgggaatatgaatttccacccctgcccccttcatctaatgctcctcctcccccacctcag
cgaaacacctcttacctcaaaacacaggtcctctcccctgatacgatttatactgccaag
tttgttgcgtacaatgatgatgaggaggaggattcctgtctagcagcaggtcaggataag
tactccagtgcaagaaagtcttatggtgaccttcctcctgccacccctaagtcacagcag
tcctcacgccagccacgcccagcctcagatggcatcttcctttccaactcattccagcca
tcctcggtcaatgccaacagtactggttccaaactgagccatccccctcccataccaaac
aaaccgagtttcatcaatccaagcaacgcaaaaggatcaaactcttacactggatctact
ggagcaattgcaggatcacaggaatcttatctggacccaagagataaaaaatcaaaaagt
caagatgcagatttacctggtgcaccagaaaacctgacgttccgcgagcgacagagacta
ttttcccaaggccaggatgtgtccaacaaagtaaaagcctctaggaaattaatggaactg
gaaaatgaattgaatacaaaatag
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integrated database retrieval system
