Sphaerodactylus townsendi (Townsend's least gecko): 125427854
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Entry
125427854 CDS
T08213
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125427854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125427854
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125427854
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125427854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_5
PRY
ANCHR-like_BBOX
zf-RING_6
zf-Nse
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125427854
NCBI-ProteinID:
XP_048343366
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All DBs
Position
LG03:complement(121563297..121585654)
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AA seq
561 aa
AA seq
DB search
MKKSGFLFLEDNIVCPICLEVFRDPVTTACGHNFCMDCLQDYWDHQALIGECPYCPQCRE
PFNSRPHLRKNITLGEIALRFEQDEAQGSRRPPLAGPRDVPCDFCSPKKLKAIKSCLQCM
AALCQNHIQSHYEDKTFKNHQLIEPLSDLKANMCLKHRKLLELICKMEGNFICQMCVQEE
HKNHEAIPMKEERAEKEVEAKRIQANVENQILMLALEGQKHRGRVNYLVKVVKTARDEVT
RTFADMFKELKWLQAKLTDFIDQEERSALVEMGNSIQCRQEELTQLKKQNVWLTVLIDDP
SNYQFLQDFPKIKTMSGCTEALSGLKCEEPTSFVGLKQTLSDLKSQLSMVGLCFINKVLQ
KGITMVPYEVIPAPMDRKSLLKYYCNMNFDASTANKDLLLFKETHSVLNMGILLENHSKP
SQGFNHWPQLLCSRSLCEGCHYWEAEISNAWLCLGVTYNYRHRTEKGYMFYLIGRNNSSW
CLEWDLMKFSVWNNNIQTVVKGNFYKTVGVLLDYAGGSLTFYGVTNTMNLIYRFLTTFTE
PLYPAAMVSCGASVTLKQHPE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtctggctttcttttccttgaggacaacattgtttgtccaatatgccttgaa
gtgttcagagaccctgtcacaacagcctgtgggcacaacttctgcatggattgtctgcag
gattactgggatcatcaagctctgattggggaatgcccctactgccctcaatgccgggag
cccttcaactcaaggcctcacctccgcaaaaatataaccctgggagaaattgccttgagg
tttgaacaagatgaggctcaggggtcaagaaggccgcccttggcaggtccacgggatgtc
ccatgtgacttctgctcccctaagaaactcaaggctatcaagtcttgtctgcagtgcatg
gcagccttgtgccaaaaccatatccagtcccactatgaagacaagaccttcaaaaaccat
cagctgatagaacctctcagtgacctaaaggcgaatatgtgcctgaagcatcgcaagttg
ttggagctgatctgcaaaatggaaggcaacttcatctgccagatgtgtgtccaggaggag
cacaagaatcatgaagccatccctatgaaggaggagagagccgagaaagaagtggaggcc
aagcgaattcaagccaatgtggaaaatcagattttgatgctggcattggagggtcagaaa
cacaggggtagagtgaactacctagtgaaagtggtgaagacagccagagatgaagtgacc
cggacctttgctgatatgttcaaagaactcaagtggctgcaggccaaactgacagacttt
atagaccaagaagaaagatcagctttagtggaaatgggaaactccattcagtgtaggcag
gaagaactgactcaactcaagaagcagaacgtgtggttgacagtgctgattgatgacccg
agtaattatcagttccttcaggactttccaaaaataaagacaatgtctgggtgtacagaa
gctttgtctggtctgaaatgtgaggagcccaccagtttcgtagggctcaaacagacactg
agtgatttaaaatcccagttatccatggttggactctgcttcatcaacaaagtccttcag
aaagggattacaatggttccttatgaagtgatacctgcacctatggatcgaaagagtctt
ctaaagtattactgtaacatgaattttgatgccagcacggccaacaaagacctcttgcta
ttcaaggagacgcactctgtgttgaacatgggcatcctgttggagaaccattcaaaaccc
agccaaggattcaaccactggccacagctcttgtgcagccgtagcctttgtgagggctgc
cattactgggaggctgagatttcaaacgcctggctgtgcttgggtgtcacctacaactac
aggcatagaaccgaaaaagggtacatgttctacctgattggcaggaataacagttcatgg
tgcctggagtgggatttgatgaaattctctgtttggaacaataacatccaaactgtggta
aaaggcaacttctacaaaactgttggggtcttgttagactatgcaggtggctccctgaca
ttctatggcgtcaccaacaccatgaacctcatctaccgtttcctcaccacattcactgag
cccctgtacccagctgctatggtgagctgtggggcctctgttactctgaagcagcatcca
gagtag
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integrated database retrieval system
