Sphaerodactylus townsendi (Townsend's least gecko): 125428113
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Entry
125428113 CDS
T08213
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125428113 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125428113 (DDX5)
03009 Ribosome biogenesis [BR:
stow03009
]
125428113 (DDX5)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125428113 (DDX5)
Spliceosome [BR:
stow03041
]
Complex A
U1 snRNP components
U1 related factors
125428113 (DDX5)
Complex B
125428113 (DDX5)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
Pre-60S particles
Helicases
125428113 (DDX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
125428113
NCBI-ProteinID:
XP_048343704
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All DBs
Position
LG03:complement(132531388..132538250)
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AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPD
VARRPMQEIEQYRASKEITVKGHSCPKPVMNFYEANFPANVMDVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSTGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGYGAQGFGNGTAFGNNFG
AAGMQAGFRAGTPAYQNGYDQQYGNNMANMHSAMNQQQYAYPTTGATPMIGYPMPANYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcgggtttggtggccctcgttttggaggaagt
agagggggatcgttaggcggaaagaagtttggaaaccctggagaaaagcttgtgaagaaa
aagtggaatctggatgagcttcccaaatttgagaagaacttctaccaggagcatcctgat
gtggcaagacgtcctatgcaagagattgaacaatacagagcaagcaaagaaatcacagtt
aaaggccatagctgtccaaagccagttatgaacttctatgaagcaaactttcctgcaaat
gttatggacgttattcagagacagaattttactgaacccactgctattcaggcacaaggc
tggcctgttgccttgagtggactggacatggttggtgtagcacaaactggatcagggaaa
acactttcttatttgttgcctgctatagtccatataaatcatcagccattcctggaacga
ggagatggacctatttgtttggtgctggcaccaactcgagaattggctcagcaagtgcaa
caagtggctgcagaatatggtagagcctgccgtttgaagtctacttgtatttatggagga
gctcccaagggaccacaaatacgtgacctggaaagaggtgtggaaatttgcattgcaaca
cctggaagactcatagattttttggaagctggaaagactaaccttaggagatgcacttac
cttgtacttgatgaagctgacaggatgcttgatatgggatttgaacctcagatccgaaaa
attgtagaacagattagacctgacaggcagacattgatgtggagtgcaacatggcctaag
gaagtcaggcagcttgcagaagacttcttaaaagaatatgtgcacatcaatattggtgca
ctggagctaagtgcaaaccacaatattctgcagatagtcgatgtgtgtcacgatgtagag
aaagatgacaagcttattcggctgatggaggaaattatgagtgagaaagaaaacaagacc
attgtttttgtggagaccaaaagaagatgtgatgaccttactagaaaaatgaggagagat
gggtggccagcaatgggtatccatggtgacaaaagtcagcaggagcgagactgggttctg
aatgaattcaaacatgggaaggctcctatcctgattgccacagatgttgcttccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacgttt
tttacacctaataatattaagcaagtaagcgacctcatctctgtccttcgcgaggctaac
caagcaatcaaccccaaattgctccagttggttgaagacagaggttcaggtcgttccaga
ggtgaccgacgagacagatattctacaggcaaaagaggtggatttggttttagagagagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagactttggtgcaaaagctcaa
aacggtggctatggtgctcaaggttttggtaacggaactgcatttgggaacaactttgga
gcagctggcatgcaggctggcttcagggctggcactccagcttaccagaatggctatgat
caacagtatggaaataacatggcaaacatgcacagtgcaatgaaccaacagcagtatgca
taccctacaactggtgccacgccaatgataggttatccaatgccagcaaattatacccaa
taa
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