Sphaerodactylus townsendi (Townsend's least gecko): 125428167
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Entry
125428167 CDS
T08213
Symbol
TCOF1
Name
(RefSeq) treacle protein
KO
K14562
Treacher Collins syndrome protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125428167 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stow03009
]
125428167 (TCOF1)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
90S particles
Other 90S particles
125428167 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
LisH
Motif
Other DBs
NCBI-GeneID:
125428167
NCBI-ProteinID:
XP_048343846
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All DBs
Position
LG03:complement(81195875..81244044)
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AA seq
1104 aa
AA seq
DB search
MAAAAGEQKELLALMHKHLVQIGYEKAAKELLRQSGQKNFPSPSVPLEDIFIQWKKASFQ
AQKRKGDDIKTDIPAKIRIPDPESSSETSEEEDVASPVKTNLPVNNSSTAQAESSSEDED
SSSEEDVVSGKIVKPTVTGNQTATPLQLAAQKANSVPGKGVAIASVQAKERPNKANSNKP
SPLLMAKAGQNKVLSGKPEAASPSQILKGQTTAPVTTAQKAAASESSSSSSESEEEMTST
AVKTPAPQQALKKTESSSEDSSEDSDSEEEEESNAAAVQIKPAVQRPPISAMPVKSCPTP
VTSSKGSTVKVSQVFKGQTKTQVSIAQKVVVSETSSSSSESEEEKTSTTIKAPIPKPALE
KTESSSEDSSEDSDSEEEESNAATVQVKPAVQSPQISATSVKSSPVTVASSKGSTVKASL
AKTKAKSSEKTPQTSAASVKNALPNLLSSKATSTPAPLKQTSKPSVPSLVKPALLPPVKV
AGSAESSESSESSSESEDEVLPVPVSQKISQNRTPASPVWSRESNPAAKPGTPVKAPSSV
LKKEETESESSSSSDSEDETVPAAQNLPPPSATKSNAAAQLTHAKAASSASAPLKASQQS
EDSSQDSSDESDTEEDTVFTQKSSPVAHKLLVTPIRALTAKTTGVASGKACSVQSAGKTA
ANMGSLATASLQKSSESSETDSSDSSESEEDEKPSKQKVSPQKAATPSRKIVQVNTVTPN
SNSNKCQGKNPSTTPGKVELSSAKPSQSQTSLTKSAEILKHKENATRSSSSVSKEEEDLD
LSLPFATSTQILQPGIAQKQTTRETDSSSEESSDEELEPSQSLLAGFTGLSKPPVATVQK
NIASKPSKQGSGKTTTSTTGTPAFNALAKPSEKVGPADISSSDSSTSDSDAEETPAGPKA
ETGAMPFSAKGAVVAKMSKVTGAGKTGPAAITSKDISAKKASAKSERNSKAKGNGAIKLS
LIPHTENGDKAVAQGPGAGAQGDMKTSPVVAVKTPKTAKSSKAGVKEKQNKKRKLAAGET
GLKEPKRKKQKGQADSEEGRKKKKKKSKSKSKGKVPKEKDGKEKKSKSKKGKKKMPSSVT
SDGSLLLKKKKKKKKKTSDLEGAV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcagctggtgagcaaaaggagttgctggctctgatgcacaaacatttggtc
cagattggctacgagaaagcggcaaaggagctgctgcgacagagcggtcagaaaaacttc
ccatcgccctcagtccctcttgaggatatcttcattcagtggaagaaagcttccttccaa
gcccagaaacgaaagggagatgatatcaagacagacattccagcaaagatcagaattcct
gaccctgagagcagctctgagacctcagaagaggaggacgtggcaagccctgtaaaaact
aaccttcctgtgaataacagctctacagcccaggcagaaagtagtagtgaagatgaagat
tcatcctctgaagaagatgttgtttctggaaagatagtaaagcctactgtgacaggaaat
caaacagctacacctctgcagcttgccgctcaaaaagccaattctgtcccaggtaaaggg
gtagccatagcttctgtccaagcaaaagagagaccaaacaaagctaactcaaacaaacca
tctcctttacttatggccaaagctggacagaataaagttctttcaggcaaaccagaagct
gcctcgccctctcagattctcaaaggacagactacagcaccagtaaccactgcacagaag
gcagcagcgtctgaaagcagtagcagctcatcagagagtgaggaagaaatgacatcaaca
gcagtaaaaaccccagctccccagcaagctctaaaaaagactgagagcagcagtgaggac
tccagtgaggattctgactccgaagaagaagaagaatcaaatgcagcagctgttcagata
aagccagctgtacaacgtccaccaattagtgcaatgccagtgaaaagctgtcctacccct
gtcacgtcttctaaaggatctacagtaaaggtatctcaggttttcaaaggacaaactaaa
acacaagtaagcattgcacaaaaggtagtagtctctgaaaccagtagcagctcatctgag
agtgaggaagaaaagacatcaacaacaataaaagccccaattcccaaaccagctctagaa
aagactgagagcagcagtgaggactccagtgaggattctgactccgaagaagaagaatca
aatgcagcaactgttcaggtaaagccagctgtgcaaagtccacagatcagtgcaacgtca
gtgaaaagctctcctgtcactgttgcatcttctaaaggatccacagtaaaggcctctcta
gcaaagacaaaggcaaaatcatctgaaaaaacacctcagacttctgcagcatcagtgaaa
aatgcactgccaaacctgctgtcaagcaaggcaacctctactccagctcctttgaagcaa
acatcaaagccctctgtgccaagcttggtgaaacctgcacttctgcctcccgtcaaggtt
gctgggagtgcagagagctcagaaagcagtgaatcatcatctgagagtgaggatgaagtt
ctcccagttccagtaagccagaagatctcgcaaaatcgcactccagcctccccagtttgg
agtcgggaatccaatccggctgctaaacctggcaccccagtgaaggctccttcaagtgtt
ctgaaaaaggaggaaactgagagcgagagcagcagctcatctgacagcgaagacgaaaca
gtcccagcagcacaaaacctgccacctccatctgcaaccaaatcaaatgctgcagctcag
ctcacacatgccaaggcagccagttctgcatcggcaccactcaaggcatcccaacagagt
gaagacagtagccaagattcaagcgatgagtctgacacagaagaagacacggtgttcact
cagaaatcatctccggtggcacataaactcttagtcactcccataagagctctgactgca
aagactacaggtgttgcatcgggcaaagcatgcagtgtgcagtcagcagggaaaaccgca
gcaaacatggggagtttggcaactgcctctcttcagaagtcatcagagagttcagagact
gacagctctgattcctccgagagcgaagaggatgagaagccatcaaaacagaaagtatcc
ccccaaaaagcagccactccttcacggaagattgtgcaggtcaacactgtaacacctaat
tccaattccaataagtgccaaggaaaaaacccttccacaacaccggggaaagtggagttg
agctctgccaagccgtctcagagccagacatcccttacgaagtcagctgagattctaaaa
cacaaggaaaatgcaacaaggagcagctcttcagtcagcaaagaggaggaagacttggac
ttatcgctaccattcgcaacttccacacagattttacagcctggtatagcacagaaacaa
acgacaagagagacagacagctcatctgaagagtccagtgatgaagagctggagccctcc
cagtctctcttagcaggttttacaggtctttccaaacccccagtagccactgtgcagaag
aacattgcatctaagccatccaaacaaggctctgggaaaacaacaacctccactaccggt
actcctgcattcaatgcccttgcaaagccttcagagaaagtgggccctgctgacatctca
tcaagtgacagcagtacctctgattcagatgctgaggaaacaccagctgggccaaaggca
gagactggggccatgccattttctgcaaagggagctgttgtggcgaagatgagcaaggtt
accggggcggggaaaactggaccggctgccattacttcgaaggacatttctgcaaagaaa
gcttcagccaagtctgagaggaatagcaaagccaaaggaaatggagccataaagttgtct
ctcattcctcacactgagaatggagataaggctgtagcccaaggccctggtgcaggagcc
cagggggacatgaagaccagccctgttgtggcggtcaagactcccaaaacagcaaagtca
tcaaaggctggcgtcaaagagaagcagaataagaaacggaaactggccgctggagaaact
ggccttaaggaaccaaaaagaaaaaaacagaaagggcaggctgactcggaggaggggagg
aagaagaagaagaaaaaatccaagtctaaaagcaaaggaaaggtgccaaaggaaaaagat
ggcaaggagaaaaaatccaaatccaagaaagggaagaaaaaaatgccttcttctgtcact
tctgatgggtcacttttgttaaagaaaaagaagaagaaaaagaagaaaactagtgatctt
gagggagcagtttga
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