Sphaerodactylus townsendi (Townsend's least gecko): 125428220
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Entry
125428220 CDS
T08213
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125428220 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125428220 (MBD4)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125428220 (MBD4)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125428220 (MBD4)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125428220 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
125428220
NCBI-ProteinID:
XP_048343930
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All DBs
Position
LG03:complement(45984538..45995336)
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AA seq
539 aa
AA seq
DB search
MSALEASGPLQGRDISTTQTTKDVNKDKGQLLTAAEEYVGPNEEHSENLAKSPVQCKEDG
ATISLADSLGRKGVPEGWGKIIKQRQAGKTAGRYDIYFISPQGMKFRSKRALSDYFKKNG
EIVLKSEDFDFNVPVQNSAQLRIQGSTVTESRVQICNSKSQISNLGLQNSEGGHGTFLKN
EVLELQTNARELQNVSICLQDGPTIDHSKNCFLKTCETKNLDDSQNKSRRKTSHQKRGTG
CIKRSRQKKGESVNNQKMCWLDSRRKKLCSKDELLISEPTVEMHVNPVVPILEYKSGAEV
LKGGKSPSEFVTTTTDKNPSKPESLNNWMPLKIQDIKFAPKENINVSQTSDEKHFTSIKE
GQVRRTQVERRKTSPYFSSRFLKEAPSPPRRKAFQKWTPPRSPFNLVQETLFHNPWKLLI
ATIFLNKTSGKMAIPVLWDFLQKYPSPKAARTANCKEMSELLKPLGLYELRAKTIIKFSD
EYLTKQWKYPIELHGIGKYGNDSYRMFCVNEWKEVQPQDHKLNDYHAWLWENHEKLNLS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgctggaagcgtcgggacctctgcagggcagggatataagtactacacaaacg
accaaagatgtaaacaaagacaagggtcagttactgacagcagcagaagaatatgttggt
cccaacgaagaacactctgagaacctggccaaaagcccagtccaatgcaaagaggatgga
gcaactatatctttagcagattctctcggccgcaaaggtgtcccagaaggatggggaaag
ataataaagcaaaggcaggcaggcaaaactgcaggaagatatgacatttattttatcagt
cctcaaggaatgaagttccgctctaaacgggctctctcagattactttaaaaagaatggt
gaaattgttcttaaatcagaggattttgattttaatgttcctgttcagaacagtgcacaa
ttgagaatccaaggatcaactgttacggagtcaagagtacagatctgcaactcaaaaagc
cagatttctaatcttggtttgcaaaatagtgaggggggacatggaacatttctgaaaaat
gaagttttggaactgcaaactaatgcaagggagttgcaaaatgtttctatctgtttgcaa
gatgggcccacgatagatcactcaaagaactgttttttaaagacctgtgaaactaagaat
ttagatgatagccaaaacaaaagccggagaaaaacatcacatcaaaaacgaggaacggga
tgtattaaaagaagcagacaaaagaaaggtgagagtgtaaataatcagaaaatgtgttgg
ctagactcaagaagaaagaaactatgctcgaaggatgaactgcttatttctgaaccaaca
gtggagatgcatgttaatccagttgtacctatcttggaatacaagtcaggtgcagaagtt
ttaaaaggtggtaagagtcccagtgagtttgtgactacaactactgataaaaatccttca
aaacctgaaagcctgaacaattggatgcctttaaaaatccaagatattaaatttgctccc
aaggagaatattaatgtttcacagaccagtgatgaaaaacactttacctcaataaaagag
ggccaagttcgaagaactcaagtggagagaaggaaaaccagtccatatttttccagtaga
ttcctcaaagaagctccaagccccccaagaaggaaggcttttcagaaatggactccacct
cgttctccctttaatttggtccaggaaactctctttcataatccctggaaactcttaatt
gctaccatatttctgaataaaacttcaggtaagatggccatccctgttctttgggatttt
ttacagaaatatccttcacctaaagcagcaagaactgccaactgcaaggaaatgtcagag
ctacttaaacctcttggtctatatgaactcagagcaaagactattatcaaattttcagat
gagtatttgaccaaacagtggaagtatcctattgagttgcatgggattggaaaatacgga
aatgattcttatagaatgttctgtgtcaatgaatggaaggaggtacagccacaagaccat
aaactaaatgattatcacgcttggctttgggaaaaccatgagaaactgaatcttagttaa
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