Sphaerodactylus townsendi (Townsend's least gecko): 125428270
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Entry
125428270 CDS
T08213
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125428270 (HELZ)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
125428270 (HELZ)
3'-5' decay
Other 3'-5' decay factors
125428270 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
ResIII
UvrD-helicase
PhoH
zf_CCCH_4
PAM2
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_7
AAA_16
Bac_DnaA
MOV-10_Ig-like
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
125428270
NCBI-ProteinID:
XP_048344022
LinkDB
All DBs
Position
LG03:133100990..133286533
Genome browser
AA seq
1945 aa
AA seq
DB search
MADRRPEKSCEQACESLRQQDYEVAVKHCTEALFFLSQYPPTCFPKACQAEINRIKIESL
LYRIASSLQLKNYGKADEDCRHVLGEGLAKEDHTFRAVLCCMHLKGKLQIVSNALSKSLM
GESLNGMVTKDLTRLKTLLVETEAAAGKVPSVYHVEDLEEGSQDGWKFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYACRLIRLKQQKENKQCLGSYMESLI
EKWMNSLSPEKVLSECLNGVRVEHNPELSVTVTTKKSQQTWTFALTCKPARMLYRVALLY
DAHRPHFSIMTISVGDSITQVSQDVPDNCQEWIGGKMTQNGIDHSVYKISIAFSTEIFGT
FRQTVVFDFGTEPVLMQRVMIDAASTEDLEYLMNARQQLLTTAKRWDCTSKTIVEFEPNE
TTELEKSLLIRYQIPLSADQLFTQSVLDKSLTKNNYQSRLHDLLYIEEIAQYKEVSKFNI
KVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVT
KQKSVLTQGTKEKVYEAAIEEKTKDYIFLRISKECCEELSLRADCEMQVELQFQLNRLPL
CEMHYALDRIKDNNILFPDVSLTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGN
PQAKPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLSTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVSVERVVNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEHLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNESLHG
ITFDQIKAQLEALELKKTYVLNPLAPEFIPRALRQHHSSNPNKPQQSPPKVKNHHHTQND
HFQTDGIVQPNPSVLIGNPIRAFTPPPPPPPAPHSNLGKSPSPVQRIDPHTGTSILYVPA
VYGGNMVMSVPLPVPWTGYQSRFAVDPRLITHQAAVAYNVNLLQAHGRGSPIPYGLGHHS
PVSLGQQQLQHSDKEQLEQNRNSKNEPSTGPEINRIRTPEKKSMESKQGDLEVSSQNRSP
ESRSSTAYPNSKFHRKDNLNLRQLNLHLTPPHAQYAAPNRHFQHLSQIPRQPYPMQQQQQ
QQQNLLSQQQNHLPEQQNQMHPQQSQIGQQHNHLNQQPPQPPSQLSPVYQPGPNQSLFKN
PVPHRPHSPGVDAVMSEQHPPSLLQEVTNPLRPIAHHNPVIPSHLNQFIEENPPGMPIGE
PLDHIHGNLALETLRQQQARLQQWNEHNAYVSQGSISYSHHHHPHLAHLSQQPVGLHQQP
IRANWKFANNVEDETEATYSRFQDLLRELSHRDQNESRDLVEMPPPQSRLLQYRQVQPRS
PPALPSPSCSSNHTGHFANFSENRDIELSNNPAFQQHLPQMYNPPFSMPSEHITPPPLKY
LQPDGSWTYANVPQSHLMGQGFHYGIPPLLHRSQQNPFIQIQNHQHTVGQEPFHPLTSRA
VSASSLHSLEEYEPRGPGRPLYQRRISSSSTQACSEDLNTPQDSLGQCKELQDHSNPSSF
NYSSPELWVNSTSSTPYQNIPCNGSSRTVPPRELLVPSKTVKPPEEPVKVENIQLSSSFN
YNMLQHLGQFPPLMPNKQIAESNSSSQQSSGVNKPAMSYASALRAPPKPKAPPEQAKKNS
DPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcactcagacagcag
gattatgaagtggcagtgaagcactgcacggaagccctctttttcctcagccagtatcct
cccacttgcttcccgaaagcatgtcaggctgaaatcaaccgcatcaaaattgaaagtctt
ctctatagaattgcttcttctttgcaacttaaaaactatggaaaagctgatgaagactgt
aggcatgtattgggagagggactggccaaggaagatcacactttccgtgcagtgctttgc
tgcatgcatcttaaagggaagctgcagattgtatctaatgctctttctaaatcactgatg
ggagaatcactgaacggaatggtaactaaagacctgacaaggctgaaaacacttctggtt
gaaacagaggcagcagctggtaaagtaccctctgtataccatgtagaagatttggaagaa
ggatctcaagatggctggaaatttcggcccccaccaaggggagttacaagtagtgaagaa
tacacgttatgcaaaagatttttagagcaagggatctgccggtatggtgcacagtgtacc
tcagcacattcccaggaagagctaacagaatggcagaaacgatatgcttgccgcttgata
agattaaaacagcaaaaggaaaacaaacaatgtttgggaagttacatggaatccttgatt
gaaaaatggatgaattcgttatctcccgagaaagtgctcagtgaatgccttaatggagta
agagtagaacataaccctgaactgtcagtcactgtcaccaccaaaaaatcacagcagacg
tggacatttgctctcacatgtaagcctgcaagaatgttgtatcgggtggcactgctgtat
gatgcccatcgtcctcatttcagtatcatgacaatatctgtgggagatagcatcacccag
gtatcacaagatgtcccagacaattgccaggaatggattggaggaaagatgacccagaat
ggaatagatcattctgtttacaaaatcagtatagcctttagcacagaaatctttggaaca
tttcggcaaactgtggtatttgattttgggactgaaccagttttgatgcaacgagtgatg
attgatgctgcttctacagaagatcttgaatacctgatgaatgcacggcaacaactatta
actacagccaagcgttgggattgcacttctaaaactattgtagaatttgagccaaatgag
actactgaattggaaaaaagccttctgatcagataccaaattcctctatctgctgaccag
ctatttacacagtctgtcttggataaatcattgaccaagaataactatcagtcacgattg
catgatctcctttatattgaagaaatagcacaatataaagaagtcagcaagttcaatata
aaagtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaag
tatgctcaaaatggacaactttttggacgctttaaactcactgaaacactttctgaagac
actttggcaggacgactggtgatgaccaaagtcaatgctgtttatttattgccagtcact
aaacagaaatcagtactgacccaaggaaccaaagagaaggtgtatgaagcagcaatagag
gaaaaaacaaaggattatatatttttgagaatatccaaggaatgctgtgaagaacttagt
cttcgagcagactgtgaaatgcaggttgaacttcagtttcagttaaaccgcttaccactc
tgtgaaatgcattatgcattggacaggatcaaggacaacaatattctctttccagatgtc
agcttgactcccacaataccttggagtcccaacagacagtgggatgagcagttggatcct
aggctcaatgcaaagcagaaggaggctgttctggctatcacaactccactctcaatacag
ttgcctcctgttcttatcatcggtccctatgggacaggcaaaaccttcactttggctcag
gcagtcaagcatatacttcagcagcaggatactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcgaaacctctcagggtgtatttcagaaatcgctgggttaagacagttcaccca
gttgtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccccagaag
gaagacattcttaaacaacgagtagtagttgttacattgagtacttcacaatatctatgt
caactggatcttgaacctgggttttttacacatattttgttagatgaagccgcacaagcc
atggagtgtgagactatcatgcctctagcattagcaaacaaaaatacaagaattgtcttg
gctggagatcatatgcaactaagtccttttgtctacagtgaatttgcgcgagagagaaat
cttcatgtctcactacttgaccgtctctatgaacactatcctgcagaatttccatgcagg
atcctgctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaactt
ttctatgagggcaaattgatggcaagtgggaaacagccggcgcacaaggatttctaccct
ctgacattcttcacagcacgaggagaagatgtgcaagagaaaaacagcacggctttttac
aacaatgcagaggtgtttgaagtagtggaacgtgttgaagaactgaggagaaagtggcca
gtagcctgggggaaattggatgatggcagcataggtgttgtaacaccatatgctgatcaa
gtgtttcgaattcgagcagagcttaggaaaaaaagattgtctgatgtcagtgttgaaaga
gtggtaaacgttcagggaaaacagtttcgagtgttgtttctcagcacagtacgtacacgg
cacacatgcaaacacaagcaaacacctatcaaacggaaggagcatttactggaagattct
acagaagacttggattatggatttctgtccaattataagctgctcaatacagccattaca
agagcacagtcactagtagctgtagtgggagatcctattgctttgtgttccattgggaga
tgcaggaaattttgggaaaggtttattgccctgtgtcatgataacgaaagtcttcatggt
atcacatttgatcagatcaaagctcagttggaagctctggaattaaagaaaacttatgtc
ttgaatccgttggctcctgaatttatcccgcgggctctacggcagcatcattcatcaaac
cccaacaaaccacaacagtcgccaccaaaggtgaagaaccatcatcatacccagaatgac
cattttcaaactgatggaattgttcaacctaatccctctgtcttaattggaaatcctatc
agagcatttactccaccaccacctcctcctcctgcacctcattccaatcttggaaaatct
cctagtcctgttcaaaggatagatcctcacactgggacaagcattctttatgtacctgct
gtttatggaggaaatatggtcatgtctgtgcctttgccagtgccatggacagggtatcag
agtaggtttgctgttgatcctcgtctcattacccaccaagcagctgtggcatacaatgtg
aatttattacaagcacatggacgtggatctcctatcccttatggtcttggacatcattca
cctgttagcttagggcagcagcaacttcaacattcagataaagagcagcttgaacaaaat
cggaacagtaaaaatgaacctagtactggacctgaaatcaatagaattcggactcctgag
aaaaagtccatggaatccaagcagggtgacttagaagtgagttcccaaaatagaagcccg
gagtcgcgctccagtactgcttatcctaattctaagtttcaccgcaaagataatcttaac
ctcagacagctgaatcttcacctcacccctccccatgctcagtatgctgctcccaatcgc
catttccaacacctgtcccagattccaaggcagccataccctatgcagcagcagcagcag
cagcagcaaaacctcttaagtcaacaacaaaaccatttgcctgaacagcaaaaccaaatg
catccacagcaaagccagatagggcaacagcataatcatttaaatcagcagccaccacag
ccaccatcacagctttcccctgtctaccaaccaggccccaaccagtcactttttaaaaac
ccagttccacacagacctcattcccctggcgtcgatgctgtgatgtcagaacagcatccc
ccatccctgttacaagaagtcactaaccctctaagacccattgcacatcacaacccagtg
attccatcccatttgaaccagttcattgaagagaatcctccaggaatgcctataggggaa
ccattagatcatattcatggaaatttagctttggaaactttaaggcaacagcaagcaaga
ctacaacagtggaatgagcataatgcctatgttagtcaaggcagtatttcttattctcat
catcaccaccctcacttagctcacctttctcagcaaccagtgggattacatcaacagcca
attagggcaaactggaaatttgccaacaatgtagaagatgaaactgaggcaacatattca
aggttccaggatttgctccgagaactatcacaccgtgatcaaaatgaaagcagggaccta
gttgaaatgccaccacctcagtcaagacttttgcaatacagacaagtgcagcccagaagc
ccaccagcactcccttctccttcgtgcagctcaaatcatactggccactttgccaacttc
tctgagaacagagacattgaactctccaacaacccagcgtttcagcagcatttgcctcag
atgtacaatcctcctttctcaatgccatctgaacacataaccccacctcccctgaaatat
ctgcagcctgatggatcatggacctatgctaatgtcccccagagtcatctaatgggtcaa
ggctttcattatggtatacctccattacttcacagatcacaacagaacccttttatacaa
atacagaatcatcagcacacagttggtcaggaaccatttcaccccctcacttctcgagca
gtgtcggcttcttcactgcacagcttagaagagtatgaaccaagaggaccaggcaggcca
ttgtaccaaagaagaatttcatctagttcaacccaggcttgttctgaagatttaaacacg
cctcaagacagtcttggacagtgtaaagaacttcaggaccatagtaacccatcctctttc
aattattcatcccctgaattgtgggtaaactccacctcatcaaccccataccaaaacatt
ccatgcaatggctccagtagaacagtcccgcccagagaactgttagttccatcgaagact
gtcaaacccccagaggaaccggtgaaagttgaaaacatccagttatccagttcttttaat
tacaacatgctccaacatctcggccaattcccacccctcatgcccaacaagcagatcgca
gaatccaacagcagcagccagcagagttctggtgtgaacaagcctgccatgtcctacgca
agtgctctgagggctccaccaaagcccaaagcccctcctgagcaggcaaaaaagaatagt
gatcctttgtctttgtttcaagaacttagtctaggtagttcatcaggtagcaatggcttt
tactcctattttaaataa
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integrated database retrieval system
