Sphaerodactylus townsendi (Townsend's least gecko): 125428294
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Entry
125428294 CDS
T08213
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125428294
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
Contactins
125428294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_6
V-set_CD47
Ig_4
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
125428294
NCBI-ProteinID:
XP_048344082
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Position
LG03:40487021..41166995
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AA seq
1029 aa
AA seq
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MRLLWELLVLQSFMLCLADDNTLHGPVFIQEPSNVVFALNSEEKKVKLNCEVKGNPKPTT
RWKLNGTTVDIGMDYRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGN
LYIAKVEKSDVGNYTCVVTNTVTNNRVQGPPTPFILRNDGVMGEYEPKIEVQFPEMVPSA
KGTTVKLECFALGNPVPTISWKRADGKQIPRKARRHKSSSILEIPNFQQEDAGLYECVAE
NVRGRNVARGQLTFYAPPNWIQKISDAHVTIEENIFWECKANGRPKPSYSWLKDGEPLIP
QERIQIEHGSLTITTVNLSDTGMYQCMAENRHGVIYASAELSVIAVGPDFSKNFLKRLTL
VKVGGEVTIECKPKASPRPTFTWKKGKENLRENERITLLEDGTLKIANVTKADAGSYTCA
ATNHFGAASSTGNLVVKDPTRFIVAPSSMDVTAGESILLPCQVSHDHPLDIMFTWSFNGR
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLNHAGKYICMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEITDTTAQVSWRPGADNHSPITTYVIQARTPFSVGWQAVNTVPDVIDGNTFT
ATVVGLNPWVEYEFRVVAASLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGTKSELVI
TWETVPEELQNGGGFGYVVAFRPVGTVSWMQTVVASPDASKYIFRNESLPPFSPYEVRVG
VYNNKGEGSFSPVTIVYSADEEPSRAPTSIIARSLSSSEVEVFWSLLLESQSKGRIQGYE
VRYWKNEDKEEQAGRIRTMTNQTFAKIGHLKGNTLYHLAVKAYNTAGMGPSSAIVNVTTK
KPPPSQPPGNIIWNSSDSKIILNWDQVKAQNNESEVKGYKVLYRWNRQSSTSVIETNKTS
VELSLPFDEDYIVEIKPFSDGGDGNSSEQIRIPKISNAYARGSGASTSNACTLSAISTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggaactgctcgtgctgcaatcattcatgttgtgccttgcagatgac
aacacactgcatggtccagttttcatccaggaaccaagcaatgtcgtttttgcactcaat
tctgaagaaaagaaagttaagttgaactgtgaagtgaagggaaatcctaaaccaacaaca
aggtggaagttaaatggaaccactgttgacattggtatggattaccgctacagtgtggtt
gaaggcagcttgttgatcaataatcccaataaaactcaagatgctggaacatatcagtgc
atagcaacaaactcgtttggaacaattgttagcagagaagccaaacttcaatttgcatat
cttgaaaatttcaaaaccaggacaagaagcacagtttcagtccggcaagggcagggaatg
gtgctgctgtgcggaccaccgccacactctggagaactgacgtatgcctggattttcaat
gaatatccatcatttgtgcaccaggataaccgtcgttttgtttcacaagaaactgggaat
ttgtacattgcaaaagtggagaaatctgatgtggggaattacacgtgcgtggtaacaaac
actgtaaccaacaacagagtacaaggacctcctacccctttcattctgagaaatgacgga
gtgatgggtgaatatgagccaaaaatagaagtgcagttcccagaaatggttccgtctgca
aaaggaacaactgtgaaactggagtgctttgcacttggaaacccagttcctacaatcagc
tggaagagagcagatggaaaacaaattcccagaaaagcccgaaggcacaaatcaagcagt
attcttgaaatcccaaactttcagcaggaagatgctggcctatacgagtgtgtggctgaa
aatgtgagaggcaggaatgtggccagaggccagctgacgttttacgctcctcccaactgg
attcagaaaataagtgatgctcatgtgactatagaggaaaacatcttttgggaatgtaag
gcaaatggaagaccaaagccttcttacagctggctgaaggatggtgaaccactcatccct
caggaaagaattcagatagagcatggatccctcacaataaccaccgtgaacctatcagat
actggcatgtatcagtgcatggcagaaaacagacatggggtcatctatgccagcgcagag
ctgagtgtaatcgctgtgggtccagatttttccaaaaacttcttgaaaagattaactctt
gtaaaagttggtggtgaagtaaccatcgagtgtaagcctaaagcttctccgagacccacc
tttacttggaagaaaggaaaagagaacctaagagaaaatgagagaataactcttttagaa
gacggaactctgaaaattgccaatgttactaaagcagatgctggaagttacacatgcgcc
gccacaaaccattttggggcagccagcagtactgggaacctggtggtgaaagatccaaca
cggtttatcgtagctcctagtagcatggacgtcactgctggtgaaagcattcttctgcct
tgccaagtgtctcatgatcacccgctagatattatgtttacctggtcgttcaatggacgc
ctgatagactttgaaaaggatggggatcactttgaaagagttggaggacaggattcagct
ggtgatttgatgatcagaagcatccagctgaatcatgccggaaaatacatctgcatggtg
caaactagtgtggacaagctatcggctgctgcagacctgattgtaagaggtcccccaggt
cccccggaagctgtgacaattgacgaaatcactgacacaacagctcaggtatcttggagg
ccaggagcagacaaccatagtcccattacaacatatgttattcaagcaagaacacctttt
tctgttggatggcaagcagttaatacagttccagatgtcatagatggtaatacatttaca
gcgacggtggttgggttaaacccatgggtggagtatgaattccgagtagttgctgcaagc
cttattggaattggagaaccaagcagaccatcagagaaacggaggactgaagaggctctt
cctgaggtcaccccagctaatgtcagtggaggcggtggaactaaatctgaactggtcata
acatgggaaacagttcctgaagagttacaaaatggaggtgggtttggttacgtcgtagcc
ttccgtccagttggtactgtaagttggatgcagactgtcgtggcttctcctgacgcctcc
aaatacatcttcagaaatgaaagtttaccgccattttccccgtatgaagtcagagtgggt
gtgtacaacaacaagggcgaaggttctttcagtccagtcacaattgtctattcagcagac
gaagaacccagcagagctccaaccagcatcattgctagaagcctttcatcttcagaagta
gaagtgttttggtccttgctgcttgagtcccagagcaaaggaaggatacagggctatgag
gttagatattggaagaatgaagataaggaagagcaagctggaagaataagaaccatgacc
aaccaaacttttgcaaaaatcggccacctgaagggaaatactttatatcacttggctgtc
aaggcttacaatacggcagggatggggccttccagtgctatagtcaatgtaactacgaaa
aagccaccacccagtcaaccccctggaaacatcatctggaattcatcagactccaagatt
atcctgaactgggatcaagtaaaagcacagaacaatgaatccgaagtgaaaggatataaa
gttttatacagatggaacagacaaagcagcacatctgttatagaaacaaacaaaacatct
gtggagctttcgctgccttttgatgaagattacatcgtagaaataaagccatttagtgat
ggaggagatggaaatagcagtgagcaaatccgaattccaaagatatcaaatgcatatgca
agagggtcgggcgcttctacttcaaatgcttgcacgttgtcagccatcagcacaataatg
atttccctcacagctagatcaagtttatga
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