KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125428319
Entry
125428319         CDS       T08213                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04137  Mitophagy - animal
stow04144  Endocytosis
stow04145  Phagosome
stow04148  Efferocytosis
stow05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:stow00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125428319 (RAB5B)
   04145 Phagosome
    125428319 (RAB5B)
   04137 Mitophagy - animal
    125428319 (RAB5B)
   04148 Efferocytosis
    125428319 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125428319 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stow04131]
    125428319 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stow04147]
    125428319 (RAB5B)
   04031 GTP-binding proteins [BR:stow04031]
    125428319 (RAB5B)
Membrane trafficking [BR:stow04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    125428319 (RAB5B)
 Endosome - Lysosome transport
    125428319 (RAB5B)
Exosome [BR:stow04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125428319 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   125428319 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   125428319 (RAB5B)
  Exosomal proteins of melanoma cells
   125428319 (RAB5B)
GTP-binding proteins [BR:stow04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    125428319 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 125428319
NCBI-ProteinID: XP_048344143
LinkDB
Position
LG03:174426613..174470714
AA seq 215 aa
MTSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTGGAVGRNRGVDLHEQSQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaccagcagaggagctgccaggccaaatggtcaatcacaagctagcaagatctgtcag
ttcaagctagtactgctgggtgaatcagcagtgggcaagtccagcctggtgctgcgtttc
gtcaagggtcagtttcacgagtatcaggagagcaccattggtgcggctttccttacacaa
tcggtatgcctagatgatacaacggtaaagtttgagatctgggacacagctggccaggaa
agatatcacagtttggcccctatgtactaccgaggggctcaagctgccattgtggtgtac
gacataaccaaccaggaaacgtttgcacgagcaaagacatgggtgaaagaactccagcgg
caagctagtcccaacatagtcatagccttagcgggaaacaaggccgatcttgccaacaag
cgcatggtagagtatgaagaggcccaggcctatgcagatgacaacagtctattgtttatg
gagacatcagccaagacagcaatgaatgttaatgatctcttcctggcgatagctaaaaag
ctgccaaagagcgagccccagagcacagggggtgccgtcggtcggaatcgaggtgtggat
cttcacgagcagtcccagcagaacaagagccagtgttgtagcaactaa

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