Sphaerodactylus townsendi (Townsend's least gecko): 125428508
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Entry
125428508 CDS
T08213
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125428508 (RNF130)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125428508 (RNF130)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125428508 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
SP24
PspB
EMP24_GP25L
Prok-RING_4
CrgA
zf-RING_16
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
125428508
NCBI-ProteinID:
XP_048344639
LinkDB
All DBs
Position
LG03:82195564..82272883
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AA seq
423 aa
AA seq
DB search
MMLKCVLPSWNCLPAVPVLVLFNCCTFLASADNTNQAYYSALVNVTVWNSERSTPTLLRL
DRGRYGQDSPKVAVKGLLVAPLPINGVSDRLGCDSRTRFQVPPNTKQWIALLQRGNCTFK
EKILRAASHNASAVVIYNNVSSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNMSVL
ITIAVGNRHQAKNVNRSSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGD
AAKKAVGKLTTRTIKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKTCVDPWLS
EHCTCPMCKLNILKALGIVTNVPCADNMAFDMERLTRGQLGNRRSVLGELSSGSTLSLEP
LHTSGISQFPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIKATANLNANKA
EWY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaagtgtgttttaccttcttggaactgtttacctgctgtgcccgttttggtc
ctatttaattgttgtactttcctagctagtgcggataatacaaatcaagcatattattca
gccctggtaaacgtgactgtgtggaattctgagcgttctacaccgactttactaagactt
gatcgtggacgctatgggcaggactctcccaaagtagctgtcaaaggtctgcttgtagct
cctttaccaatcaatggagtttcagatcgtttaggctgtgattctcgaacacggtttcaa
gttcctccaaataccaaacagtggattgccttgttgcagcgaggaaattgtacctttaaa
gaaaaaatactgcgcgcagcttcacacaatgcttcagctgtggtaatttacaacaatgta
tccagtgaggagcctgtaactatgactcatcaaggaactggagacattgttgctgtcatg
ataacagaatcaaaggttaaagagatcctgaattacttagaaaaaaacatgtctgtccta
attacaatagcagttggaaaccgccatcaagcaaaaaatgttaatcggagctctcttgtc
tttgtatcaatatcatttatagttttgatgataatttcttcagcatggttaatattttat
ttcatccaaaagatcagatatacaagtgctcgtgatcgaaatcagcgccgtcttggagat
gctgccaagaaagctgttggcaaactgacaacaaggactatcaagaagggtgataaggaa
acagacccagactttgaccattgtgctgtctgcatcgaaagttacaagcaaaatgatgtt
gtccgcattctgccttgcaagcatgttttccacaaaacctgtgtggatccctggctcagt
gagcactgtacctgtcctatgtgtaaactgaacatattgaaagccctgggaattgtgaca
aacgttccatgtgctgacaatatggcctttgacatggaaaggctcaccagaggccagctg
ggcaacaggagatcagtacttggtgaacttagcagtggcagcacactcagcctggagccc
ctgcatacctctggtatatcacagtttccacaggatggggaattgaccccaaggacagga
gagatcaacattgctgtaactaaagaatggtttattattgccagttttggcctcctgagt
gccttaacactctgctacatgatcatcaaagccacagctaacttaaatgctaacaaggct
gagtggtattga
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integrated database retrieval system
