Sphaerodactylus townsendi (Townsend's least gecko): 125428761
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Entry
125428761 CDS
T08213
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03320
PPAR signaling pathway
stow04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125428761 (RXRB)
03320 PPAR signaling pathway
125428761 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125428761 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stow03310
]
125428761 (RXRB)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
125428761 (RXRB)
Nuclear receptors [BR:
stow03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
125428761 (RXRB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
125428761
NCBI-ProteinID:
XP_048345336
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Position
LG03:complement(1115833..1132859)
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AA seq
474 aa
AA seq
DB search
MGDSARAAPGGGAGGDCRSPDSSSLSSSPPPEPSAPLHPSMIGSAMTTSLGGLGSPFPVI
SSSMGSPGLPATPSVGYGPVSSPQINSTVNLSGLHPVSSSDDVKPPLGMRVMSGHTHGSM
MPGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCVVDKRQRNRCQ
YCRYQKCLATGMKREAVQEERQRGKDKEGEGDLAVGGANEDMPVEKILEAELAVEQKSDQ
SVDGSGTGGSSVSGGCGAPGSERSPRTFDVNEPNDPVTNICQAADKQLFTLVEWAKRIPH
FSELPLDDQVILLRAGWNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDR
VLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGDVELLREKVYASLESYCKQKY
PEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggagactcggcacgggccgcaccgggaggcggagcaggcggggattgcaggagtccc
gacagttcctctctcagctcgtcccccccgcccgagccttcggcccccctgcacccttct
atgatcggctctgccatgaccacctccctcggcgggctgggctccccgttccccgtcatc
agttcttctatgggctccccaggtctccctgcaactccctccgtcggctacgggcctgtc
agcagcccccagatcaactccacggtgaacctctcgggcctacatccggtcagcagctcg
gacgacgtcaagcccccgctgggcatgcgggtgatgtctggccacacccacgggagcatg
atgcccggcaagcgcctctgcgccatctgtggcgaccggtcgtcaggcaagcattatggg
gtgtacagctgcgagggctgcaagggcttcttcaaacgcaccatccggaaggacctgacc
tacacctgccgcgacaacaaggactgcgtcgtggacaagcgccagcgtaaccgctgccag
tactgccgctaccagaagtgcctggccaccggcatgaagcgcgaagcggtgcaagaggag
cgccagcgcgggaaggacaaggaaggggagggggacttggccgtgggcggggccaacgag
gacatgcccgtggagaagattctggaagccgaactggccgtggaacagaaatcggaccaa
agtgttgacggatccggcacggggggcagctcggtgagtgggggttgtggtgctccggga
tcagaacgctcgccccggacctttgacgtaaacgagcccaacgaccccgtgaccaacatc
tgccaggcggccgacaagcagctcttcacgctcgtggagtgggccaagcgcatcccccac
ttctcggagctgcccctcgatgaccaggtcatcctgctgagagcgggctggaatgagctg
ctgatcgcctccttctcccaccgctcgatctctgtgaaggacgggatcctgctggccacg
gggctacacgtgcatcgcaacagcgcccacagtgctggcgtgggtgccatctttgacagg
gtgttgacggagttggtgtcgaagatgcgggacatgcggatggacaagacggagctgggc
tgcctgcgggccatcatcctcttcaacccagatgccaaagggctctcgaacccgggagac
gtggagctactgcgggagaaagtgtacgcctcgctcgagtcctactgcaaacagaagtac
ccggagcagcagggcaggttcgccaagctgctgctgcgtctcccggcgctgagatccatc
gggctgaaatgcctggagcacctcttcttcttcaagctgattggggacacccccatcgac
accttcctcatggagatgctggaggccccccaccagctgtcttga
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