Sphaerodactylus townsendi (Townsend's least gecko): 125429038
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Entry
125429038 CDS
T08213
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125429038 (SYNPO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
125429038
NCBI-ProteinID:
XP_048345748
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All DBs
Position
LG03:complement(80829600..80922612)
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AA seq
1250 aa
AA seq
DB search
MIKTTLLQPCLQPQSNYAGPGKMNQNPHNSKPTCGEGYGCLGRQQGVEKESSPVGRRSDT
KDQEIKGSTRDNFLLELCRTNGEILPNKTDGSGLAPSNEHPVARDSPRPASGLPGPSNRS
DQNQEWKVVKVKRVLISPVGEPRKANISRSASLSEKELKEAKARSQRIAAQLTTPPNSNS
KGVLLFHRRKQRVNAFTLENTKTSTEQAASEISSKAIHHIIPSHGKELHLKEILSDNREL
KGFSSIKDSGLWEQKGSMEKHEESLAEEGPQRNKIKNEETVSITNTTISSEEILAEDFQQ
IPLSVYLKENTETVSTNGVHEPATSELEKLPAVEHTPVIDNVKNVPPIVDEELYLPSTDK
ENNSSAPKKQLFTLQTDSENNVIDKKPYLLLIGSENNNNAFDKELYVPVIDRENNVLDEA
LSETVIDRKENGEILNKEEDMAVIENEKNLPTTDTEKSILITDSQPKDTLTHNNKQYCEV
RLTLSKPMPVKNRTARPFGTQSLVTTHTPAEESPVVELPPPPTYAETFSSPPPVTRVRSP
PAYSALYPTEEQKASVPQVVNYEVSRPGPPSEEDREPLPTKSGILEESIGRRAAKKSMFT
FVEKPKVAPNPDLLNLVQRADNRKKQRGRTTPEDEPFALGAEASNFLPENTLDGLTPATA
DNAPEWSSCLRSPRIQPKPKIKSNQNLTEARGKGAELFARRQTRMQKYIIESPSHPDIAR
SPSPTISLPPSWKYASETHLSPMAFQPLPKSPVRSPRAPPPVPLYNSNMTESEISKKELE
ISKQQPYQLQSSLFILSPAKDPVRSLPRAAPPPKPVVPEPSYMRQASCPTSPLPPSPVFY
LPVQSSPSRPLPGHFAPSAGTVPEPRNITTATGASTGTSVEYSSRILSPRAKGVYQAPRP
SFSTKDAGIEPQERRVSLPASPTWIPQLIQQPISLDGWISTAQTSEPEEGQMEAFQAVMI
PPPMSPSWSERSLSPFRQETDPKSSRQMQAMLARNIINAARRKSSSPKATGIDSFRPFTP
PASSANVSYSGSSPKNTSTHSSSPLQSPKPTRMEGYRRVSLPITSSTPPQDSASSNNSPR
LLGSHSTIYKSPLQSPKAVRMNGNKYFTLPASSGATVFNAASSNGPRTLGNHSMSYRNPA
PSPKPSVMDTHRIFTTPASATRKSSCASPKNLDNCSPTIKSPLQSPMMGIHYPVRRYTTS
SPTNSDVSIDSEDSGIKSPSIRSFNICPRGWNGSLRLKRGSLPAEAPCTS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacaaccttgctgcagccttgtctccagcctcagtcaaactatgcagggcct
ggcaaaatgaaccaaaacccacacaattctaagcccacctgtggagaaggctatggctgt
ttggggaggcagcaaggggtggaaaaagaaagcagtccagttggaaggagatcagataca
aaggaccaagagataaaagggtctacaagagacaatttcctgctggaactatgtagaacc
aatggagagatactaccaaacaaaacagatggtagtggcttggcacccagcaatgagcac
ccggtagcaagagactctccaaggcctgcttcaggcctgcctgggcctagcaacagaagt
gaccagaaccaagaatggaaagtggtgaaagttaaacgagtccttatttctcctgttggt
gaacctcggaaagcaaatatttcaagaagtgcgagtctttctgaaaaagagctgaaggaa
gcaaaagccaggagccagagaattgctgcccagttgacaaccccacccaattctaactcc
aaaggcgtgctgttgtttcacagacgcaagcagcgagtgaatgcgtttaccttggaaaac
acaaagacaagtacggaacaagcagcttcagagatcagctccaaagctattcaccacatc
attccaagccatgggaaagagctccatttgaaggagatcttaagtgacaacagggagctg
aaaggattttcctccatcaaagattctgggttgtgggaacaaaaaggcagcatggagaaa
catgaggagagcctggctgaggagggccctcaaaggaataaaataaaaaatgaggagact
gtttctataacaaacacaacaatatcttctgaggagattctagcagaagactttcaacaa
atccctctcagcgtgtacctaaaagagaatacagagactgtctcaactaatggagtgcat
gaacctgccaccagtgagcttgaaaagttgcctgctgttgaacacacaccagttattgac
aatgtgaaaaatgtgccacctattgttgatgaggagctgtacctacctagcactgataaa
gagaataatagttccgcccctaaaaagcagttgtttacactgcaaacagacagcgaaaat
aatgttattgataaaaagccatatttactgcttattggtagtgagaataacaacaatgcc
tttgacaaggaattgtatgtccctgttattgacagggagaataatgttcttgatgaggcg
ttgagtgaaacagttattgacaggaaggagaatggagagattcttaacaaggaggaggat
atggcagttattgaaaacgagaaaaatctccccactacagacacagagaaatccattcta
attactgacagccagcccaaggacactctgactcataataataagcagtactgtgaagta
cgcctgactttgtccaagccaatgcctgtgaagaaccgaacagcaagaccctttgggact
cagtcgttagttacaactcatacaccagcagaggaaagccctgttgtggagcttcctcca
ccacctacctatgcagaaacattttccagtcctcctccagtaactagagtcaggtcacct
ccagcctattcagctctgtatcctactgaagagcagaaagcctccgttccacaagtagtg
aactatgaagtcagcagaccaggacccccctctgaagaagatagagaaccacttccaact
aaatcaggcattctggaggagtccatcggccgcagagcagccaaaaagtccatgtttact
tttgtggagaagccaaaggtggctccaaatcccgatctcttgaacttagtccagagagca
gataatagaaaaaagcagagaggaagaacaactcctgaggatgaaccatttgctctggga
gcagaggcctctaactttttaccagaaaatacattagatggtctaaccccagctactgca
gataatgccccagaatggtcttcatgtctaaggtcaccaagaatacaaccgaaacctaag
ataaaatccaaccaaaacctaacggaggcaagaggaaagggagcagaattatttgccagg
agacagacaaggatgcaaaaatacatcatagagtccccatcacaccctgatatagccaga
tcaccttcacctactatttccctccctccctcctggaaatatgcttcagagactcacctg
tcccctatggccttccaacctttacccaaaagcccagtgagatctccaagagctccccct
cctgtacctttgtacaacagcaacatgacagagagcgagatttccaaaaaggaattggaa
atttctaagcaacagccataccagctccaatcttccttgtttatcctttccccagccaaa
gatccagtaagatctttaccaagagccgcaccaccacccaagcctgtggttcctgagccc
agctatatgagacaggcttcttgcccaacatctcctttgccaccttcacctgttttctat
ttacctgtccagtcaagtccaagcagaccattaccgggtcattttgctccatctgctgga
actgtacctgaacctcgaaatatcacaacagctactggagcatcaacaggcacatctgtt
gaatattcctccagaattttgtctccaagagctaaaggggtctaccaagctccaagacct
tctttttccaccaaggatgcaggaattgagcctcaggaaagaagagtgtccctccctgct
tccccaacgtggattccacaactgattcaacagcctatcagtctggatggttggataagt
acagcccaaacatcagaacctgaggaaggacagatggaggcttttcaagcagtcatgatc
ccacctcctatgtctccctcctggagtgaaaggtctctgtccccatttcgacaggaaact
gatcccaagtccagccgtcagatgcaagcaatgctggccagaaacatcatcaatgctgcc
agaaggaagagctcttctcctaaagccacaggaatagatagtttcaggcccttcactccc
cctgcctcctctgccaatgtgtcatactcaggcagcagtcctaagaacacaagtactcat
tcctcaagcccactacaatctcccaagccaacaagaatggaaggatacagacgtgtctct
ctccccatcacatcctctacaccaccacaagatagtgcatcatcaaacaatagccccaga
ttgctgggcagccattccaccatttataaaagcccactacaatctccaaaagcagtgcgg
atgaatgggaacaagtacttcacattgcctgccagcagtggggcaacagtgttcaatgca
gcatccagtaatggaccgagaacattgggcaaccattctatgagctacaggaatccagca
ccatctcccaaaccctcagtcatggatactcacaggatcttcacaacaccagcaagtgca
accagaaaatcatcatgtgctagtcctaagaatctggacaactgttccccaaccatcaaa
agtcccctgcagtctcccatgatgggaatacattatccggtgaggcgctataccactagt
tcacctaccaactcagatgtgtccattgactctgaagactctgggatcaaatcgcccagt
atccgcagcttcaacatttgtccccgaggctggaacggaagcttgcggctgaagcgaggc
agcttgcctgcagaagcaccctgtacctcctaa
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