Sphaerodactylus townsendi (Townsend's least gecko): 125429043
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Entry
125429043 CDS
T08213
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04137
Mitophagy - animal
stow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125429043
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125429043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125429043
03009 Ribosome biogenesis [BR:
stow03009
]
125429043
04131 Membrane trafficking [BR:
stow04131
]
125429043
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stow04147
]
125429043
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125429043
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125429043
Membrane trafficking [BR:
stow04131
]
SNARE
SNARE associated proteins
Others
125429043
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125429043
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125429043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_28
AAA_14
NPHP3_N
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
Vps4_C
AAA_18
ATPase
ATPase_2
IstB_IS21
AAA_7
ABC_tran
DUF815
AAA_24
AAA_lid_PRS2_C
ResIII
TsaE
Sigma54_activat
Viral_helicase1
NB-ARC
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
125429043
NCBI-ProteinID:
XP_048345757
LinkDB
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Position
LG03:109658438..109697178
Genome browser
AA seq
807 aa
AA seq
DB search
MPATGGDPKGEDYSTAILRQKHRPNRLIVDEAANEDNSIVCLSQAKMEELHLFRGDTVLL
KGKKRRETVCIVLTDDSCQSEKIRMNRVTRNNLRVRLGDVVSVQACPDVKYGKRIHVLPI
DDTIEGMTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPTPHCIVAPD
TIIHCEGEPIKREDEEENLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLADDVDLEKVANETHGHVGADLAALCSEAA
LQAIRKKMNVIDLEDDTIDADILNSMAVTMDDFQWALGQSNPSALRETVVEVPQVSWDDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILQA
NLRKSPVAKDVDLNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKAERERQRHKYA
AMDDDYDPVPEIRRDHCEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPAGNQN
SGGTGSTGSNSGQGSLFQEEGDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccagccacgggaggggaccccaaaggagaggattattccactgctatactgcgccaa
aagcatcgtcctaaccgtctcattgtggatgaagctgccaatgaagacaacagtattgtg
tgcttgtctcaggctaagatggaggaattgcatttgttccgtggggacacagtgctgctg
aaagggaagaaacgtcgggagactgtgtgcattgtacttacagatgactcctgtcagagt
gagaagattcgcatgaaccgtgtaactcgcaacaacttgcgagtccgtcttggagatgtg
gtcagtgtccaggcctgtccagatgtcaagtatggaaagcggatccacgttctgcccatt
gatgacaccattgaaggcatgacagggaacctctttgaagtttacctcaagccctacttt
ctggaggcttatcgacctgtacacaaaggtgacatttttctggtgcgagggggaatgaga
gctgtggagtttaaggtggttgaggtggatcccactccccattgcatcgtggctcctgac
actatcatccactgtgagggagagcccatcaaacgagaggatgaagaggaaaacctcaat
gatgttggctatgatgatattgggggctgccgcaaacaattggctcagattaaggagatg
gtggagttaccattgagacacccggcactcttcaaagctattggtgtgaagcctcctcga
gggattctcctttatggtcctcctggcactgggaaaacgcttgtggcccgggctgttgca
aatgaaactggagcctttttctttctgatcaatggcccagaaattatgagcaaattagct
ggagaatccgagagcaacttgcgtaaagcatttgaggaagctgagaagaatgctccagcc
atcatttttattgatgagctggatgccattgctcctaagagggagaagacacatggggaa
gtagagcgccgtattgtttctcagctcctcacactcatggatggcctgaagcaacgctca
catgtgatagttatggctgccaccaatcgacccaacagtattgatcctgccctgcgtcga
tttgggcgttttgaccgagaaattgacattgggatcccagattcagtgggaaggctggaa
atattgcagattcataccaagaacatgaaactggctgatgatgtggatttggagaaggtt
gccaatgagacgcatggccatgtgggtgccgatttggcagcattgtgctctgaggcagca
ctccaggcaatccggaagaagatgaacgtcattgacctggaggatgacaccattgatgcc
gacatccttaactccatggctgttaccatggatgacttccagtgggctcttggccagagt
aacccctcagcactacgtgagactgtagtagaagtgccacaggtcagctgggatgatatt
gggggtcttcaggaagtgaaacgtgagctgcaggagctggtgcagttcccagtggagtat
cctgacaagttcctgaagtttgggatgacgccatcaagaggtgttctgttctatggaccg
cctgggtgtggcaagacgctgctggccaaggccattgccaatgagtgtcaagctaatttt
gtctccatcaagggtcctgagctgctcaccatgtggtttggagagagcgaggccaatgtc
cgtgatgtttttgacaaggcccggcaggcagcaccctgtatcttgttttttgatgaactg
gactccattgctaaagcacggggtggtggtgcaggagatggtggaggtgcagctgaccgt
gttatcaaccagatcctcactgagatggatggcatgaccaacaagaagacagtttttata
attggtgccaccaatagaccagatatcatcgacccagccattcttcgtccagggcgtttg
gaccagctcatctacatccctttgcctgatgagaagtctcgagtggctatcctccaagcc
aacctgcgtaaatcacctgttgcaaaggatgtggacttgaattatctggctaaaatcaca
catggcttctctggtgcagacctcactgaaatctgccaacgtgcctgcaagcttgccatc
cgtgaggccattgagatggagatcaaggcagaacgggaacgccagcgtcacaaatatgct
gctatggatgatgattatgatccagtaccagagatccgccgtgatcactgtgaggaagca
atgcgctttgctcgccgctcagtcagtgataatgacatacgcaaatatgagatgtttgcc
caaacattacagcaaagccgtggcttcggtaatttcaggttcccagcaggaaatcagaac
agtggtgggacaggcagcactggaagcaacagcggccaagggagccttttccaggaagag
ggtgatgacgatctctacaactga
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