Sphaerodactylus townsendi (Townsend's least gecko): 125429270
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Entry
125429270 CDS
T08213
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125429270
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125429270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_I
DUF5798
NPV_P10
EzrA
Laminin_II
Tropomyosin
ATG17_like
F5_F8_type_C
DUF948
Fez1
Fib_alpha
DUF1664
Motif
Other DBs
NCBI-GeneID:
125429270
NCBI-ProteinID:
XP_048346182
LinkDB
All DBs
Position
LG03:23062060..23145505
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AA seq
1842 aa
AA seq
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MHRLKLRILPMALLLYLLLWVQVADAQGPEEPDLLYHGCSEGSCYPATGNLLIGRSHSLS
ATSTCGLEEHQEYCIVSHLQDSEKCFTCDSRSPSLRESHRIENVIYLSGQDGEQTWWQSE
NGVEEVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSSDFGHTWKVYRYFAFNCSKLFP
GVPTQIPTHVNQAVCDQRYSEIEPSSHGEVIFKVLDPAVKVEDPYSREIQDLLRVTNLRV
NFTKLHTLGDNLLDSRHQVLQKYYYAVYEMVLRGSCFCYGHASECAPLAGVSSRVEGMIH
GRCVCKHHTKGLNCELCKDFYQELPWRPAEAYNPHACQECNCNEHSHKCHFDMAVYLATG
NTSGGVCNDCQHNTMGRHCQICKPFYYRNPLADIRASSACIPCDCDPVGSLDGGVCDSHT
DAMLGMIAGQCRCKENVKGMRCDSCKEAFYGLSRNDPQGCQPCRCDPRGIIAGSSPCDHI
SGDCYCKRFVTGRYCNQCLPEYWGLSYDMAGCRSCACDFGGAYSNRCSTDDGQCPCRANL
MGRQCSEVQPGFFCMPLDYYMYEAEHAMGHPPTHHGLPGALRPEAPVDCVEYYNGVQNGR
KVRLRRQHSTARLLQQRAALRRARQLQQKPDVEVVQREHTGHMITWTGPGFARVRDGAGL
SFQIDNIPYAMEYDILLRYEPESTEDWEAVVSVSSQALPMSPRCGNVLPSEQKYQESLPH
SSRYVLLPRPFCFEPRNRYEIIVRFQRAGVTQRYPAAFILVDSLVLLPRVMELPGLDGND
PVSVERREELERYTCLEVFRMATMPDLAEMCARLLCSISALMHDGALPCQCDPQGSTSSV
CHKLGGQCQCKPNVVGRRCDQCAPGTYGFGPYGCIPCACSLEGSVSKICEPVSGQCQCQH
GTVGRQCDQCPPGQWGFPSCRPCHCNGHSEECDSHTGTCHQCRDYTAGRHCERCLDGYYG
DPILGSGQQCRPCPCPGYPGSRHYHGISCHTDRETNQIVCLCAPGYTGPRCDSCAPGYFG
APEQESGACRPCQCNNNIDTSDPEACDPHTGQCLRCLYHTGGPHCAECQPGYYGNAFQRN
CRRCTCNEQGTLPSHCPEGICHCDRMTGSCPCRANVVDKNCDKCAANFWGFGSELGCQPC
NCDPAHSLRSDCNLFTGQCHCQPGFGGRVCSHCQENHWGDPEQECLACECNPTGSESLQC
DHLRGHCRCREGFTGRRCDQCQRGFRQNFPRCSACHPCFGLWDEVLRKLWAQVGRLQETV
QALKEGGPITEASNSRIRSLERSLDQAQELLGDGSSPSSSLLPHLSSLLAQLRADMDDLW
QQLQTTDSHLGGTEQDAAGQRSRLNALNRELGMLNRTVGHLRNQLDTIAGANFNESFHSI
VGYFQMSEQAQLQAEASVQGAQSPVGQSKHTHQSTVELLKLRGNTFRRTAAAHRKSLRDL
KKNVSSLHLHRINQKICGGSGEEDCQRAPCGGANCKDSSGQPHCGGPGCTGALPVSMRAL
NTAQNISRQLEATNRQLGTIASKVQEIQDLARDTRNRAQETLDRAQVARSRTENSTARLR
EFIQKIKDFLAEEGADPESIELVAQQVLDISLPISPTEIGSLLQEIRNTISQLDGVDVIL
NSTVGDLARARDLLAEAEQAKERAEGVQATITDTRAALNDAKHKVRAADRAMDSTREVIR
NVEGRVAEAEQKLQAVVSKASQLESRLGELAQDVATLQEKSQSNQRLAQQAKGKAERATA
VAGRLSKEVEKVMQKYQELQKQLEGQPGGGDSLQRLMSLKMEAQKLLDKANSSKRKVEEL
EERFEANEKEMQAKATKLQTLEKKVTELLNYIREKATAYATC
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggttgaaacttcgcatactgccaatggcactgctcctctacttgcttctttgg
gttcaggtagctgatgctcaaggcccagaagagcctgacctgctgtaccatggctgctca
gaggggagctgctacccagccacagggaacctgctcatcggaaggtcccacagcctaagt
gctacgtccacttgtggcttggaggaacaccaagaatactgcatcgtaagccatctgcag
gactcggagaagtgcttcacttgtgactctcgttccccgtccctgcgagagagccaccgc
atagagaacgtcatctacctgagtggccaggatggtgagcagacctggtggcagtctgag
aatggtgtggaagaagtcagcatccgcctggacctggaagctgagttccatttcactcac
ctcataatgaaatttaagacattccgcccagcagccatgttgatcgaacgttcgtcagat
ttcgggcacacctggaaggtttaccgctattttgccttcaattgctccaaactgttccct
ggagtccccacgcagatcccaacacatgtcaaccaggcagtctgtgaccagcgatactct
gagattgagccctctagccatggtgaggtgattttcaaagttctggacccagctgtaaaa
gtagaggatccttacagccgagaaatccaagatctattacgagtcactaacctacgggtg
aacttcaccaaacttcacactctgggcgacaacctgctggactcccggcatcaggtgctg
cagaaatactactatgctgtatacgagatggtgctgcgtgggagctgcttctgctacggg
catgcctcagagtgtgcccctctggctggagtgtcgagcagagtcgagggcatgatccat
ggacggtgcgtgtgcaaacatcacaccaagggcctcaactgtgagctctgcaaggacttc
taccaggagttgccatggagaccagctgaggcctacaatccgcatgcctgccaggagtgt
aactgcaacgaacactcgcacaagtgtcacttcgacatggctgtgtacctggccacaggc
aacaccagtggcggagtctgcaacgattgtcaacacaacaccatgggccgccattgccag
atctgcaagcccttctactatcggaaccctctggcggacattcgggccagctctgcttgc
atcccttgtgactgtgacccagtgggctcgttagatggtggcgtgtgtgacagtcacacc
gacgcaatgctgggcatgatagctgggcagtgccgttgcaaagagaacgtcaaggggatg
cgctgtgacagctgcaaggaagccttttatggactgagccgcaatgaccctcagggatgc
cagccctgcaggtgtgaccctcgaggaatcatcgcaggcagcagcccatgtgaccacatc
agcggtgactgctactgcaagcgtttcgtgactgggcgatattgcaaccagtgtttgcct
gaatactgggggctgagttatgacatggctggatgccgaagctgcgcttgtgattttgga
ggtgcctacagcaacaggtgctccacggatgacgggcagtgcccttgtcgtgccaatctc
atgggccgccagtgcagcgaagtgcagcctgggtttttttgcatgcccctggactactat
atgtatgaggcagagcatgccatgggccacccaccaactcatcatgggctgccgggcgca
ctgcgcccggaggctcctgtcgactgtgtggaatattacaacggggtccagaacgggcgc
aaagtgaggctgcggcgccagcacagcacagcaaggctcctgcagcagagagcagctctc
cggcgagcccggcagctccagcaaaagcccgacgtggaagttgtgcagcgtgaacacact
ggtcatatgattacatggactggcccaggatttgctcgggtccgagatggagctggctta
tccttccagatcgacaacattccctacgccatggagtatgacattctgttgcgctacgag
ccagagtctacagaggattgggaggctgtcgtcagtgtcagctcacaagctttacccatg
agccctcgctgcggcaatgtgctgccttcggagcagaaataccaggaaagcctgcctcat
agttccaggtatgttctccttccacggcctttctgcttcgagccccggaaccgttacgag
atcattgtgcgcttccagagagcaggcgtgacacagcggtatcctgcagccttcatcctt
gttgactcgctggttctgttgccacgtgtgatggagctgcccggtctcgacgggaatgat
ccagtttctgtggagcgtcgggaggagttggagcgctacacgtgcctcgaggtgtttcgc
atggccaccatgcctgacctggctgagatgtgtgcacgtctgctctgcagcatctctgcc
ctgatgcatgatggggcactgccctgccagtgtgacccgcaaggctccaccagcagtgtc
tgccacaaactaggtggacagtgtcagtgtaaacccaatgtggtgggtcgccgctgtgac
cagtgtgccccaggcacctatggattcggaccatatggctgcattccctgtgcctgttcc
ctggagggctctgtctccaagatctgtgaaccagtcagcgggcagtgccagtgccagcat
gggaccgtgggacggcagtgtgaccagtgcccaccaggccagtggggcttcccaagctgc
cgcccttgtcactgcaacggccactcggaggaatgcgattcgcacaccggcacctgccac
cagtgccgtgattacacagccggccgtcactgtgagaggtgcttggatggttactacgga
gacccgatcttgggctcagggcagcaatgtcggccctgcccatgtcctgggtatccgggc
tctcggcattatcacggcatctcctgtcacaccgacagggagaccaaccaaatagtgtgc
ctgtgtgctccaggctatacagggccccgttgtgacagctgcgcacctggatatttcgga
gcgcccgagcaggagagcggagcctgccgcccctgtcagtgcaacaacaacattgacacc
agcgaccctgaggcctgcgacccgcacactggccaatgcctgcgctgcctctatcatacc
gggggaccccactgcgccgaatgtcagcctggttactacggcaacgcttttcagcgtaac
tgccgacggtgtacctgtaatgagcagggaaccctcccctctcattgccccgagggtatc
tgccactgtgaccggatgacaggcagctgcccctgccgtgccaacgtggtggacaagaac
tgcgacaaatgtgccgccaacttctggggcttcggcagtgagctggggtgccagccgtgc
aactgtgaccctgcccattcgttaaggtcagactgcaacttgttcacagggcagtgccac
tgccagccgggcttcggggggcgtgtttgctcccactgccaagagaaccactggggtgac
ccggaacaggagtgtctggcctgcgagtgcaacccaacaggatccgagagcctgcagtgt
gaccatctcagaggacactgccggtgccgggagggctttaccgggcggcgctgtgaccaa
tgccagaggggcttccggcagaactttccccgctgctctgcctgccacccttgctttggc
ctgtgggatgaagtgctgaggaagctctgggcacaggtgggacgtctgcaagagacagtc
caagccctgaaggaaggcggccccataaccgaggccagcaacagccggatacgcagcctg
gagaggagcctggatcaagcccaagagcttcttggggatgggagcagcccgagcagctcc
ctgctgccacacctcagctccctcctggcacagctcagggccgacatggatgacctgtgg
caacagctgcagaccaccgattcacacctcgggggcactgagcaggacgccgcaggacag
aggagccgcctgaatgctctgaaccgtgagctaggcatgctcaaccgcactgtcggccac
ctccgcaaccagctggacaccatagcaggcgccaactttaatgagtctttccatagcatc
gtggggtatttccagatgtcggagcaggcacagctgcaagcagaggcctccgtccaaggg
gcgcagagccccgtgggccaatctaaacacacccaccagtccacagttgaattgctaaag
ctcaggggaaacacctttcggaggactgcagcggctcaccggaaatcacttcgtgacctc
aagaaaaacgtcagcagcctccacctccacaggatcaaccagaagatctgtggcggttct
ggagaagaggactgtcagcgggccccctgcggaggggccaactgcaaggacagctcgggc
cagccgcactgcggaggccctggctgcactggagccctgcctgtgtccatgagagccctg
aatacagcccagaacatctcccgccagctggaggccaccaacaggcaactgggcaccatc
gctagcaaggtgcaagaaatccaggacctggcacgggacaccaggaaccgggcgcaggag
actctggaccgtgctcaggtggcccggagccgcacggagaattctacagctaggctcagg
gaattcatccagaagataaaggacttcctagcagaggaaggggctgatccagaaagcatt
gagctcgtggcccagcaggtactggacatctccctgcccatcagccctactgagattggc
agcctgcttcaggagatccgaaacaccatcagccagctcgacggagtggatgttatcttg
aacagcaccgtgggtgatttggcccgtgccagggatctactggcagaagcagaacaggcc
aaggaacgtgcagagggcgtacaggctacaatcacagatacacgtgcagcactgaatgat
gcaaagcacaaagtgagggcagccgatcgagcaatggacagcaccagggaggttatccga
aacgtggagggcagagttgcagaggctgagcagaagctccaggcggtggtcagcaaggcg
tcacaactggaaagtcgccttggagagctggcacaggatgtggccaccttacaggagaaa
tcgcagagcaatcagcggctggcccagcaggcaaaaggaaaagctgaacgtgccactgct
gttgcaggccggctgtcaaaggaggtggagaaagtgatgcaaaaataccaagagctgcag
aagcaactggaaggccagcctgggggaggggactcgctgcagaggctgatgagcctgaag
atggaagcacagaagctcctggacaaggccaacagcagcaagaggaaggtggaggagtta
gaagaacgcttcgaggccaatgagaaagagatgcaagcaaaagcgacaaagctgcagact
ctggagaagaaagtgacggaactgctgaactacatccgggagaaagccactgcctacgct
acctgctag
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