Sphaerodactylus townsendi (Townsend's least gecko): 125429318
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Entry
125429318 CDS
T08213
Symbol
ABCD1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow02010
ABC transporters
stow04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125429318 (ABCD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125429318 (ABCD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stow02000
]
125429318 (ABCD1)
Enzymes [BR:
stow01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
125429318 (ABCD1)
Transporters [BR:
stow02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
125429318 (ABCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
nSTAND1
AAA_22
SMC_N
Rad17
Adeno_IVa2
ARID
ATPase_2
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
125429318
NCBI-ProteinID:
XP_048346290
LinkDB
All DBs
Position
LG03:151620185..151647762
Genome browser
AA seq
739 aa
AA seq
DB search
MPLATAKVAARLAQGVTAKRAAVALLVAAYGAKKLYPVLRQQWAASDLGANAGRGGEPLG
KWGPADDATAAPPGVNRVFFVRLLRLLRMLFPGPLCQETGLLALHSAALASRTFLSVYVA
QLDGRLARCIVRKNPREFTWQLLQWLLIALPATFVNSAIRYLEGQLSLAFRGRLVDHAYK
FYFEGQTYYRVSNMDGRLRNPDQSLTEDMVAFASSVAHLYSNLTKPVLDLIVTSYTLVSS
AHSKGAGATWPSLIAGLVACLTAKVLRACSPKFGQLVAEEARRKGELRYMHSRVVANSEE
IAFYGGHKVELTLLQKCYQELASQINVLLLERLWYVMLEQFLMKYVWSAAGLVMVAVPII
TATGYSETDTEAVKQAMLEMEENELVSMRTEAFTTARSLLNALADATERVISSYKEVTEL
AGYTARVYEMFQVFQDVKCGNFRRPGELEKGAPRAGAVMKHGVRVEGPLQIKGHVVDVEQ
GIICENIPIITPTGDVVVSSLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYEGVLY
KPPPHRMFYIPQRPYMSVGTLRDQVIYPDTVEEMSQKGQTTADLEQILDIVNLNYIVQRE
GGWDAVSDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGI
ALLSITHRPSLWKYHTHLLQFDGEGGWHFEKLDPAARLSLREEKERLEQQLAGVPKMQHR
FEELCQILGEGSISEAGQV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccactggccactgccaaagtggccgcccggctggcacagggggtcaccgccaagagg
gcagctgtcgcgctcttggtggccgcttatggtgccaagaagctgtaccctgtcctgcgg
caacagtgggctgcctcggacctaggggccaacgcaggaagaggtggagagcccctgggc
aagtgggggccagcagatgatgccacggcagcacccccaggggtgaacagggtgttcttt
gtccgcctgctgcgtctcctgaggatgctcttccccgggccactgtgccaggagacaggg
ctgctggccttgcattcggctgccttggctagccgcaccttcctctctgtgtacgtggcc
cagctggatggacgcttggcccgctgcattgtccgcaagaacccccgtgagttcacgtgg
cagctgctccagtggctcttgattgctctgccagccacgtttgtcaacagtgccattcgg
tatctggagggtcagctgagcctggctttccgggggcgcttggtggaccatgcctacaag
ttctactttgaaggccagacgtactaccgggtcagcaacatggacggacgcctgcgcaat
cccgaccagtcgctcacggaagacatggtggccttcgctagctccgtggcccacctctac
tccaacctgaccaagccggtgctcgacctcatcgtgacctcttacaccttggtcagctca
gcccactcgaagggagccggagcgacctggccatcccttattgccggcctggtggcctgt
ctcaccgccaaggtgctgcgtgcctgttcgccaaagtttggccaactggtggctgaggag
gcccgtcggaaaggggagcttcgctacatgcattccagggttgtggccaattctgaagag
attgccttctatggggggcacaaggtggaactgaccctcctgcagaagtgttatcaggag
ctggcctcccagatcaacgtgctgctccttgagagactctggtatgtcatgctggagcag
ttcctcatgaagtacgtgtggagtgctgccggactcgtcatggtggctgtgcccattatc
acagccactggctactctgagacggatacggaggcggtgaagcaggcgatgctggaaatg
gaagagaatgagttggtgagcatgaggacggaggccttcaccaccgcccggagcttgctg
aatgcgttagcagatgccaccgagagggtcatctcctcctacaaagaggtcacagagctg
gcgggatacacggcccgcgtctatgagatgttccaagtgtttcaggatgtgaaatgcggc
aacttccggcgtcctggagagctggagaaaggggcgcctcgagccggagccgtgatgaag
cacggtgtgcgagttgaggggccactgcagatcaaaggccatgtggttgatgttgaacaa
gggatcatctgtgaaaatatccccatcatcacccccacgggagacgtggtggtcagcagc
ctcaatatccgggtagaggagggcatgcacttgctgatcactggccccaacggctgcggg
aagagctcgctgttccggatcctgggggggctgtggccaacctatgaaggtgtcctatac
aagccacccccacatcgtatgttctacatcccccagaggccatacatgtccgtggggacc
ctacgagatcaggtaatctaccccgacacagtggaagaaatgagccagaaagggcagaca
acggctgacctggaacagatcttggacattgttaacctcaattatattgtgcagcgggaa
ggaggctgggatgccgtcagcgattggaaggatgtgctgtccggcggcgagaagcagcgg
atgggaatggctcggatgttctaccacagacccaagtatgctctcctggatgaatgcacc
agcgctgtcagcattgatgtggaaggcaagatcttccaggctgcaaaggatgctgggata
gcattgctctctatcacccatcgaccctccttatggaagtatcacacgcatctcctgcag
ttcgatggagagggtggctggcatttcgaaaagctggatcctgcagcccgcctctcgctg
cgggaagagaaagagcgcctcgagcagcagctggccggcgtccccaaaatgcagcatcgg
ttcgaagaactgtgtcagatcctgggcgagggctccatctctgaagcgggacaggtctga
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