Sphaerodactylus townsendi (Townsend's least gecko): 125429767
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Entry
125429767 CDS
T08213
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125429767 (COL23A1)
Glycosaminoglycan binding proteins [BR:
stow00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125429767 (COL23A1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
125429767
NCBI-ProteinID:
XP_048347130
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All DBs
Position
LG03:83802881..84217885
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AA seq
686 aa
AA seq
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MSEPQEPAAAAASPQGSGCRCAGGVGRAPTVLSLLLSLLSVGACFLLSARTAKLQGRLVA
LEGELAGGRPWSPGDPLAAEPLLALLQPQVDKVLQEKLGEGLAKLRTAREAPSECRCPPG
PPGRRGKAGRRGEPGPPGQSGRDGYPGPLGLDGKPGPPGPKGDKGDQGNIGPRGDQGKDG
AAGPPGPPGQPGARGPPGDTGKDGPRGPQGLPGEKGESGEAGIKGHAGIPGEPGIQGLKG
EQGNVGPKGEKGTDGLPGPRGEQGSIGPKGEKGIDGLLGPQGKQGSVGPKGEKGVDGLPG
LQGEQGTVGPKGEKGIDGHPGPQGEHGSIGPKGERGIDGLPGPQGEPGEMGADGHIGPRG
PPGLKGEQGDTVVIDYDGRILEALKGTGKLRLTGPPGPQGPPGPQGSPGPKGELGLPGPP
GVDGEKGHKGSKGDQGSSGPMGHKGHIGEAGMTGLPGPKGMKGDQGSPGLMGSKGEIGEM
GLSGPPGIDGPKGERGAPCEPDLVQVIAEPGPPGLPGSPGLPGLSGPAGPKGIQGHKGAD
GAKGTKGESGHRGEKGAPGPQGPAGIHGLIGLPGTKGEKGKPGEPGLDGFPGLRGEKGEK
SERGEKGERGLPGRKGAKGQKGEPGPPGLDQPCPVFIFKGEPGLPELDGVNMLYPLGPDG
LPVPGCWHKTQTQKGEKTKKKKKTQP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcctcaggaaccggcggcggcggcggcttcgccccaaggcagcggctgccgg
tgcgccgggggagtgggcagggcgcccaccgtcctctcgctgctcttgtcgctgctctcg
gtgggcgcctgcttcttgctcagcgccaggaccgccaagctgcagggccggctcgtggcc
ctcgagggagaactggccggcggccgcccctggagccctggagacccgctcgccgccgaa
ccgttgctggctctgctgcagcctcaggtggacaaagtcttgcaggagaaactgggtgaa
ggattagctaaactacgaacagcacgagaggctccatctgaatgcaggtgcccaccaggt
ccacccggaaggcgaggaaaggctgggcgacgaggagaaccaggtcctccagggcagtca
ggacgagatggttacccgggccctcttggtttggatggcaagccagggcctccaggacca
aaaggggataagggtgatcaaggaaacattggcccaaggggggatcaaggtaaagatggc
gctgctggcccaccaggtcctcctggacagccaggtgcaagagggccccctggagacaca
ggaaaagatggcccaaggggaccccaaggcctccccggtgagaaaggagaatctggagaa
gcaggtatcaagggtcatgctggaatcccaggggaaccagggattcaagggctaaaggga
gaacaaggaaatgttgggcctaagggagaaaaaggtacagatggacttccagggccacgg
ggagaacaaggaagtattggtcccaagggagagaaaggcatagatgggcttctaggacct
caaggaaaacaaggaagtgttggcccaaagggggagaaaggtgtagatgggcttccaggc
ctacagggagaacaaggaactgttgggccaaagggagagaaaggcatagatgggcatcca
gggccacagggtgaacatggaagcattggcccaaagggggaaagaggcatagatgggctt
ccagggccacagggtgaacctggtgaaatgggagcagatggacacattgggccaagaggc
cctccaggcctgaaaggtgaacagggtgatactgtagtaattgattatgatggtagaatc
ttggaagctctcaagggtacagggaaactcagattgacggggccaccaggtcctcaaggg
ccaccaggccctcaaggttccccaggaccgaagggagagcttgggttacctggtccacct
ggggttgatggtgagaagggtcataaaggatcaaaaggagaccaaggaagctctgggcca
atggggcataaaggacacataggagaagctggcatgactggtctaccaggtcctaaagga
atgaaaggagaccaaggaagccctggattaatggggtcgaaaggagagataggagaaatg
ggcttgtctggtccaccggggattgatggaccgaaaggagaacgtggtgcaccttgcgaa
ccagatcttgtgcaggtcatagctgaaccaggacctccaggtttaccaggatctccaggc
ttaccaggtctatcgggccctgcaggtcctaaaggaatacaaggacataagggtgcagat
ggagcaaaaggtacaaaaggtgaaagtggccatagaggtgaaaaaggtgcccctgggcca
cagggtcctgctggtatccatgggcttattggtttaccaggcaccaaaggggagaagggg
aaaccaggggaaccaggattagatggcttcccaggtttaagaggagaaaaaggagaaaaa
agtgaaagaggagaaaagggtgaaagaggactgccaggcagaaaaggagcaaaggggcaa
aaaggagaaccgggcccacctggattggatcagccttgtccagtgttcatttttaaagga
gaaccaggtttaccagaactggatggtgtgaatatgctctaccctttgggaccagatgga
ttaccagtaccaggatgttggcacaagacgcagacgcaaaagggggagaaaacaaaaaag
aaaaaaaagacacagccttag
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