Sphaerodactylus townsendi (Townsend's least gecko): 125429807
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Entry
125429807 CDS
T08213
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125429807 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125429807 (STAB1)
Glycosaminoglycan binding proteins [BR:
stow00536
]
Hyaluronan
Cell surface receptors
125429807 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
FXa_inhibition
EGF_TEN
EGF_Teneurin
EGF_laminin
Acyl_CoA_thio
Motif
Other DBs
NCBI-GeneID:
125429807
NCBI-ProteinID:
XP_048347253
LinkDB
All DBs
Position
LG03:complement(64639565..64766818)
Genome browser
AA seq
2584 aa
AA seq
DB search
MKMKPHVLFFFLPAICLIYTAKGQKNKLKSMQCNRKLTFTQNTPCTSCAVANRLACPLGW
IKTSSLAEKGCRYTVQLEEITLSLSGCSHTCKKDIEENLCCPGYWGSECYECPAGFGKPC
SGHGTCLDGITGNGSCICKDNYGGYACQDCWDDTHFGSDCQSVCECQHGICNHGISGDGG
CTCYGGYTGPRCDQEDPLCRSVFCGDKSHCVVKDGQASCECSPGYKKFGTSCQVQDPCRS
SPCSSFAVCKTLGAAKYECTCQYGYQGDGRICQPINPCVNNNGDCPENSTYCKFLSPGKS
ICVCKPGMTGVNPAMGCTSNSGCRLYRCEKNAKCETGPDGTARCVCSEDEIGDGRACYKA
IIHDIAELNMRGRTRQRLTSAKSMFDLGCALLLGKYGPFTVLVPSSPGFPDRSQHFDATS
AHHLCRMHIIPGQHLLEDMMKAKVLWTLSGHQVIFSDQLRKSYSYSDNPKELYTITDYNY
PASNGIIHIVSALKKTPSMENLGNSQKTIGEILASLEIASRFETILENCGLPSFLDGPGP
FTVFVPSNEAVDKLRDGRLIYLFTKGINKLQELVKYHIYTAAVVTVERLTVMPNIMTMAN
QILTVNITEDGRFLLGDSGVAINKRNILASNGIIHTLDGILIPQSIIPILPHKCNEQLYK
AVAGSCVDCDALNTSVCPPQSTPMEHGIFPGECIYIHNPLSLNVLKKGCIRYCNQTLTIP
GCCKGFFGPDCAACPGGFTNPCYGKGICADGIRGNGQCRCFEGFKGIACHICSDPNKHGE
NCDKECGCVHGICDNRPGSRGVCQPGSCKAGYTGEFCNRSSHNCGLAGASLNCHQNAVCS
LNDTARCICLDGYEGDGFSCTPIDVCRNPEHGVCSENAICTNTGPGTAKCQCNNGWTGDG
KACVAINNCVMENRGGCHTNADCHYIGPGQNSCECKRGYNGDGFNCNFIDPCLVNNGGCH
DFAVCESLGAGDVDCSCPEGYMGNGDICYADIMTELARNYHFSMFFDWIKESLFSIPEGA
NVTVLVPVNTVIEKLNNTEKDLWLNPDVLPVVVRAHFLQGSFMTGQLKKYVGQELPTLNP
QVRWKINIHNGTLVIQNARVVAGDIPAINSTIYIIDQVLLPLLADRPPQHPGLQQQLNMT
LSFSRFQKLLEHYQLIGEIESSEKYTIFVPGNSSVEKYCQEFNITQLDKDTVKYHVILGE
KLFPMDLKNGIHKSTMLGLSYWLMFYKNTTQAFVNKILLDGQFFETRNGMLIGVSEILPV
QKNRCTTNTTTVQKSRCAKCNKKFKCPRGSVLYESMPENLPHCEYKSGKDRLVGCHFTCM
KVSLVSVCCEGYFGQMCEMCPGKPGNWCSGNGICQDGISGSGECQCHEGFYGTACEMCQP
GRYGASCKAECNCKNGTCNDGLLGDGSCLCNPGWKGINCDKKIETDLCNGTCDENANCLN
GSTASWPSCICSAGYTGNGIYCTEIDPCALGNGGCSVHAICTKVAAGQRICSCKEGYAGD
GIICREIDLCLENQGGCHPYAECVKTGPGQVACNCLPNYSGDGVKECKFIDPCSKSKEDC
SQQGYCFKNSIKNEICICVMGTGGVSSCTQTSWKEESVAREAVSQFFQYAKAYNIIDLSK
DGHYTFFVPLVDFQWDNTTLLEWKKGSIKDFLLYHVVICQRLLSNDLELLDSITTLSGHK
IQVSTKEDSIYLNKEVKIIDSDFEGPKAVIHFIDKILIPNDMQNHDVSSNLSEKSITEVA
EAYGYKIYSKLLEEAGLLPLINEPTHQPFTMFWPTDAAFNSLPEDRKNWLYHKEHRSKLA
AYLKQLMIRSVQVFPSILIQHKLHLTTMHGSTISFSCSKNSPGYIQTDNTKIIHSYMEFN
VGIAYGIDQLLEPPDQGARCDEFHPAVIADSECGSCIYPLPCPFRSVEQGPIMSCLYNGH
VPLSKPVPHDIVERRPYFPQFQLRRNLWNLFTRKKGCKRKCVTPRWTSKCCKDHYGRNCQ
ACPGGLEALCSNRGDCDDGFYGSGQCICKETFTGTACELCMPGRYGLDCKECNCTENGIC
NEGLHGDGFCFCASGWTGERCEIPLAATPKCSPACHRNAVCRFNNTCECNLHYEGDGRIC
TVIDQCGDDNGGCSDYANCTQIGTVVSCACLPNYQGDGFFCSPVDRCADGSNGDCSEHAT
CISTGPNTRRCECKAGYVGNGVQCLEEAIPPIDRCLDENGHCHFEAICTDLHFHDKTAGI
FHLQSPNGKYNFTYREAEARCAAEEATLATLQQLSAAQQMGFHLCIVGWLFNRSAGYPTV
YPSAKCGTNHVGIVNYGFRSDSNETWDAYCYRPKDVRCDCRDGFIGDGYTCIGSLLTVLE
QKANFSVYYFMLLDYANATQEGLEFLDLLSDDTTYKTLFVPLNSGFRDNTSLTLNDLKLH
VSVGDEPLLSVNLTSGTIISSQAGYSLSIADSVNNTHSLGSKTVNNTMIVEWDILASNGI
IHAIETPLMVPLQHGHVVQVLGDVKASASAATIGMSTIAIGLLCAAIAGISYYCLRRKNQ
GFQFRYLKAELEDEEPLPWEERSPALVSIPNPIYGTHSSLYDEPFEDSANGEDFSDTHGI
FADQ
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaacctcatgtcttattctttttcttaccagccatatgcttaatttacaca
gccaaagggcagaaaaataagttaaagtctatgcaatgcaacagaaagctgacttttacc
cagaacacaccctgtacttcctgtgctgtagctaacagattggcatgtccgctagggtgg
ataaaaacaagcagtttggcagaaaagggctgcagatatacagtacagctggaagagatt
acactttcactatcaggctgtagtcatacttgcaaaaaggacattgaagagaatctctgc
tgcccgggatactggggttctgaatgttatgaatgcccagctggatttggaaaaccgtgc
agtggccatgggacctgtttggatggcataacagggaatggaagttgcatctgcaaggac
aactatggaggctatgcttgccaagactgctgggatgatactcattttggctcagattgc
caatctgtatgtgagtgccagcatggaatctgcaaccatgggatctctggtgatggaggg
tgtacctgctatggtggatacactggccccagatgtgatcaagaagatcctctctgtaga
agcgtattctgtggtgataaatcccattgtgtggtgaaggatgggcaggcaagctgtgaa
tgttcaccaggctataagaaatttggaacgagctgtcaagttcaagatccttgcaggtcc
tctccatgctcttcatttgctgtttgcaagactcttggggcagctaagtatgaatgtacc
tgccaatatgggtaccaaggagatgggagaatatgccaacccataaacccctgtgtcaat
aataatggagattgcccagaaaatagcacctactgtaagttcttaagtccaggaaagtca
atatgcgtgtgtaaaccaggaatgactggtgtaaatcctgcaatgggctgcacatctaac
agtggatgtcggctgtaccgctgtgaaaagaatgcaaaatgtgaaacaggccctgatggg
actgccagatgtgtctgcagcgaagatgagattggagacggcagggcatgctacaaagct
attattcatgacattgctgagctgaatatgcggggaagaactcgccagagactaaccagc
gcaaagtcaatgtttgatttaggttgtgcactattgctgggaaaatatggacctttcaca
gttcttgtgccatcctctcctggttttcctgatcgatctcagcactttgatgctacatct
gcacaccatttatgcagaatgcacataattcctggacaacatttgctagaggatatgatg
aaagcaaaggtcctgtggactttgtctggacaccaagtgatcttcagtgaccagcttcgt
aagagctacagttattcagataacccaaaagaactatataccatcacagactacaactat
ccagcttctaatggcattatacatattgtcagtgctctaaagaaaacaccttcaatggag
aaccttggaaactctcagaaaacaattggagagattcttgcttctctggaaattgccagc
cgatttgaaaccatcttagaaaactgtggcctgccttcatttctggatggtcccggaccg
ttcactgtgtttgtaccaagtaatgaggcagtggataaattaagagatggaaggttaatt
tatctctttactaagggaataaacaagctccaggaacttgtgaaataccatatctacaca
gcagcagtggtgaccgtggagaggctaacagtgatgccaaatattatgaccatggcgaat
cagatattgacggtcaatatcactgaggatggaagatttctattgggtgactctggtgtt
gcgataaacaaaagaaatattttagcatcgaacggtatcattcatacattggatggcatc
ttgattcctcaatcaataatccccattctgcctcacaaatgtaatgaacagctatacaaa
gctgtagccggatcctgtgttgactgtgatgcccttaatacaagtgtttgtccaccacaa
agtacacctatggaacatgggatcttcccaggggaatgtatttacatccacaatcctttg
agcttgaatgttctgaagaaaggttgcatcagatactgcaaccaaactcttacgattcct
ggatgctgcaaaggattctttggtccagattgtgctgcttgtcctggtggatttaccaat
ccttgctatggaaaagggatttgtgctgatgggatccgagggaatggccagtgccgttgc
tttgaaggtttcaaaggaattgcctgccacatctgttcagatccaaacaagcacggggag
aattgtgataaagaatgtggctgcgtccatggaatctgtgataacagaccaggaagcaga
ggagtatgccagcctggatcatgcaaagctggatacactggagaattctgtaacaggagc
tctcacaactgtgggcttgctggtgcctctctaaactgtcatcagaatgctgtctgcagt
ctgaatgacactgcaaggtgtatctgcctcgatggatatgaaggggatgggttttcctgc
actcctatagatgtctgcagaaatccagaacacggagtgtgttcagaaaacgccatatgt
accaatacaggtcctggcacagctaaatgccaatgtaacaatggttggactggagatgga
aaggcctgtgttgccataaacaactgtgtaatggagaacagaggaggctgccacaccaat
gctgactgccactatattggtcctggacagaacagctgtgaatgcaagagaggttataat
ggtgatggttttaactgcaactttattgatccttgcttggtgaacaatggtggctgccat
gacttcgctgtgtgtgaatctcttggagctggggacgttgattgcagttgccctgaagga
tacatgggaaatggagatatatgttatgcagatattatgacggaattagcacgaaactac
cacttttctatgttctttgactggatcaaggaatctctcttcagcattccagaaggagcc
aatgtgactgttcttgtgccagttaatacagtcattgaaaagctaaacaacacagaaaaa
gatttatggttaaatcctgatgtgttgccagttgtcgtcagggctcacttcctccaaggt
tctttcatgactggacaactcaagaaatatgtgggccaagaactacccaccctcaatcca
caggtcaggtggaagataaacatccacaatgggaccttggtcattcagaatgcaagggtt
gtagcaggtgacatccctgctattaacagtactatttatattattgatcaggttctgtta
ccactacttgccgatcgtcccccacagcatccaggtttgcagcagcaacttaacatgaca
ctctccttcagtaggttccaaaagctgcttgagcattatcagttgattggagagattgag
tcttctgaaaaatataccatttttgtcccaggaaatagttcagttgagaaatattgccaa
gaatttaatatcacgcaattggataaagacactgtgaagtaccatgtcatactcggagag
aaactttttcccatggatctgaaaaatggcattcacaagagcacaatgttaggactctcc
tattggctgatgttttataagaacactactcaggcatttgtcaacaaaatcctcttggat
ggtcagttttttgaaacaagaaatggaatgttgattggggtttctgaaattctcccagtt
cagaaaaatcgctgtactaccaataccacaacagtacaaaagtcaagatgtgcaaaatgt
aacaaaaagttcaagtgcccacgaggatcagtgctttatgaatcaatgccagaaaacctc
cctcactgtgaatataagtctggaaaggatagattagttggctgtcatttcacctgcatg
aaggtttccttagtctcagtctgctgtgaaggctactttggccaaatgtgtgaaatgtgt
ccaggaaaacctggcaattggtgttctggaaatgggatatgccaagatggcatatctggc
agtggagaatgccaatgtcatgaaggtttctatggtacagcttgtgaaatgtgtcagccg
ggaagatatggagcaagctgtaaagcagagtgcaactgcaagaacggtacttgcaatgat
gggcttctgggagatgggagctgtctatgtaacccaggctggaaggggatcaactgtgac
aaaaaaattgaaaccgatctctgcaatggcacttgtgatgaaaatgccaactgcctcaat
ggatctactgcttcatggccctcttgcatttgttctgcaggatacaccgggaatggaatc
tattgtacagaaattgatccctgtgcattgggtaatggtggctgctctgtacatgccatc
tgtactaaagttgcagctggtcaaaggatctgcagttgtaaagaaggctatgctggagat
ggaatcatatgccgtgaaattgatctgtgcctagaaaaccaaggaggttgccatccctat
gcagaatgtgttaaaacaggtcccggtcaggttgcttgtaactgtcttcccaactacagt
ggggatggtgttaaagaatgtaaattcatcgatccttgctctaagagcaaagaagactgc
agtcaacagggttactgctttaagaactctattaagaatgaaatatgcatctgcgtgatg
ggtactggaggtgtatcttcatgcacacaaacatcatggaaggaggagtctgttgccaga
gaagctgtttcccagttctttcagtatgcgaaggcttataacattatcgacctatcaaaa
gatggacattatactttttttgtgccgcttgtcgatttccagtgggataataccacactt
ttagaatggaaaaagggtagcatcaaggatttccttctctatcacgtagtcatctgccag
cgcttactgtcaaatgatctggaattgcttgattccattacaactctatccggacacaaa
atacaagtttctacaaaagaggatagtatatatttaaataaggaagtgaaaataattgac
agtgacttcgagggaccaaaggctgttatacatttcattgataagattttaattccaaat
gatatgcagaatcatgatgtttcatccaatctatcagagaaatccatcacagaagttgca
gaagcttatggatacaaaatctacagcaaacttttagaggaggcgggacttcttccgttg
attaatgaacccactcaccaacccttcaccatgttttggccaactgatgctgcatttaat
tcacttcctgaggataggaagaattggctgtaccacaaagaacaccgaagcaaactggct
gcatatctcaaacaactcatgatcagaagtgttcaggtatttccttccattctgatacag
cataaattgcatttaacaactatgcatggatctactatctcatttagctgcagcaaaaac
agtccgggctatattcagacagacaacacgaagattatacacagctatatggaatttaat
gtgggtattgcttacggtattgatcagctgctggaacctccagatcagggagcccgctgt
gatgagtttcatcctgctgtgattgcggactctgaatgtggctcctgtatatatcccctt
ccatgtccttttagatcagttgaacaaggacctatcatgagttgcttgtataatggacat
gtacctttaagcaaaccagtcccacacgacattgttgaaaggaggccttacttcccacaa
ttccaactcagaagaaatctatggaatctttttacacgtaagaaggggtgcaagagaaaa
tgtgttacccccaggtggacatccaagtgctgcaaagatcactatggaagaaattgtcaa
gcatgtcctggggggcttgaagcactatgcagtaaccgtggtgactgtgacgatgggttt
tatggttcaggacaatgcatctgcaaagagacattcactggtacagcttgtgaactgtgc
atgccaggccgatatgggttagactgcaaagaatgtaattgtacggagaatgggatatgc
aacgaaggattgcatggagatggcttctgcttctgtgcttcaggatggacaggagagcgc
tgtgaaatcccactagctgcgacacccaagtgttccccagcctgccatcgtaatgccgtc
tgtcgatttaataatacctgtgaatgcaatttgcattatgaaggagatgggaggatatgc
acagtgattgaccaatgtggcgatgataatggaggctgcagtgactatgcaaactgcaca
cagattggaactgttgtctcctgcgcctgcttaccaaattatcagggggatggcttcttc
tgcagtcctgttgaccggtgtgcagatggcagcaacggggactgcagtgaacatgccacg
tgcatcagcacaggtcctaatactcggcggtgtgaatgcaaagctggttatgttggaaat
ggagtacagtgcttggaggaagcaatcccacctatagaccgttgtttagatgagaatggg
cattgccactttgaggctatctgtactgaccttcatttccatgacaaaacagctggcatc
ttccacctccagtcccccaatggaaagtacaactttacttatcgagaggctgaagcccgc
tgtgccgctgaggaagctaccttagctacccttcagcagctgtctgctgcacagcagatg
ggtttccacctgtgcatcgtgggatggttatttaacagatcagcaggttacccaacagtg
tacccaagtgcaaaatgcggcactaaccacgttgggattgtgaattatggatttcgaagt
gactccaatgagacgtgggatgcttactgttacagacctaaagatgtacgatgtgactgc
agggatgggtttattggtgacggttatacctgcatcgggagtctactgacagtgctggag
cagaaagcaaacttttcagtgtactattttatgttactggattatgctaacgccacccaa
gaaggactggaatttctggatctcctttctgatgacaccacttataaaaccctttttgta
ccattgaactctggctttagagataatacatctttaacattaaatgacctgaagcttcat
gtctcagtgggagatgagcctctcctaagcgtcaatctcacatctggtacaattatatct
tcgcaagcaggatacagcctttctattgcagactccgtgaacaacacccactctctgggt
tctaagacagttaacaatactatgattgttgagtgggacattctggcttccaatgggata
attcatgctattgaaaccccattaatggtaccgcttcaacatgggcatgttgttcaggtt
ttgggcgatgtaaaagcatctgcttctgctgcaaccatcggcatgagtactattgctata
gggctgctatgtgcagctattgcaggaatatcctactactgcctcagaagaaagaatcag
ggattccagtttcgctacctgaaggctgagctggaagatgaagagccgttaccctgggag
gaaaggagcccagccttggtgtccatcccaaatcccatctatggaacccacagttctctc
tacgatgagccatttgaagattctgccaatggagaagacttttcagatacgcatggaatt
tttgcagatcagtaa
DBGET
integrated database retrieval system
