KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125429812
Entry
125429812         CDS       T08213                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125429812 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stow03019]
    125429812 (WDR82)
   03036 Chromosome and associated proteins [BR:stow03036]
    125429812 (WDR82)
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     125429812 (WDR82)
Chromosome and associated proteins [BR:stow03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     125429812 (WDR82)
    COMPASS/SET1 complex (yeast)
     125429812 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st PEP5_VPS11_N VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_NWD2_C SMN_Tudor MinC_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 125429812
NCBI-ProteinID: XP_048347274
LinkDB
Position
LG03:complement(65759890..65783372)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHPQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLFLISTNGGFIRLIDAFKGAVLHTFAGYNNSKA
VTLEASFTPDSQFVMIGSEDGKIHVWNGEGGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTVED
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaacgtgctgcggagcttccgcgtggccaaggtcttccgcgagaac
tcggacaagatcaactgcttcgacttcagtcccaacggcgagacgctcatctccagcagc
gacgatgactccatcgtgctctacgactgccaggagggcaaaccaaagagaacattgtac
agtaaaaagtatggagtggatctcatcagatacacacatgctgccaacactgtagtgtac
agttccaataaaatagatgatacaatcagatacctctcgctgcatgacaacaaatacatc
agatacttcccagggcataacaaaagagttgttgctctgtccatgtctccagtagatgat
acctttatttctgggtcgcttgataaaactataagactttgggatcttcgttcacctaat
tgccagggtttgatgcatcctcaggggaaacctgtgtgctcatttgatccagaggggctg
atttttgcagctggtgtcaattctgaaatggtgaagctctatgatcttcgttcttttgac
aagggtccatttgctacctttaagatgcagtatgatcgaacctgtgaatggactggttta
aaattcagcaatgatggcaagctctttcttatatcaaccaatggaggattcatccgactc
attgatgcctttaaaggagctgtgctgcatacatttgcgggatacaacaacagtaaagct
gtcacattagaggcttcattcactccagattctcaatttgtaatgattgggtctgaggat
gggaagattcatgtctggaatggagagggtggaatgaaggtggcagtgctggatggaaaa
cacacaggtcccattacctgcttacagtttaaccccaaatttatgacctttgccagtgca
tgttccaacatggctttttggttaccaacagtggaagactag

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