KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125429820
Entry
125429820         CDS       T08213                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:stow00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stow03400]
    125429820 (MDC1)
DNA repair and recombination proteins [BR:stow03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125429820 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 125429820
NCBI-ProteinID: XP_048347288
LinkDB
Position
LG03:19369994..19404972
AA seq 1449 aa
MDQTQLLDWPGESDAEDPSSDGAGGCGENPKPVGRLHLLSSKYGAEKDFWIYPGKNVIGR
LESCQICLPVSSVSKAHAVIEVPSPGGPHLLYDQESLNRTRRQRMLLIPQVRYSLQDGDT
LVFGDVGCQYFMLDPEGGLESSDDSMVVPPTQATTDTNALVIEETPVPGRKMGFGRFLVQ
DSDREEEGEEVVNGGGKVLHLPSEDGSDSSVKHGARGHCSSASMFSPSFATVVPESDEES
GEPSEGDLSCPSLRLRCERAEAEPHSLANGAFPSLNQETHPIQPGSSEAKVPPDSGGQPE
AKDQDVSADPSLTGFHLDSDTDVEDEEGVCTTSEGATVKDGLALELDSDPDVDEPSLAKT
GAASAGNGQLASDVDSETGIEEAEKKPSVLDLKAHQVTENGDSDTDVEGAVGSPEVASPE
SQASTLRCESTLKSEERAGSGPEGGRPDEEVDRDTDVEAVEDPDVGPRSELPTKKEDDDT
DVEEPSPGPGNQEVAAKDREASSDSDTDVEVADLEPEGLGGTRPHGPPPTRHKDGDTDVE
EIRGICQQDNRDLTEARGINVTSVESAKRDGAACERSGGLRVGEPLPDTEIVEPLTSVPE
SQRLLDISLGSDTDVEEAAEDPDASSKGNRPVASDGSGGGDRGSCHGNLEAGPREGEDSD
TDVEVTSPSPETRAAHDSDTDVEVVASALPEKPLEEQDTQLVLVGPSAGAEEAARSAKER
EASHDLGKEDGDTDAEGNESRPGDKSSTDDEDDPDLTVQATQCYLPDVTSSPKAEKAADS
RRALEEEATQAFAFRSPSSFARFHPRKICNSPLKEEDPDLYMLEATQPFCREAPSLSEEP
TQAFVAEEEEATQLFVQQSLEGGQAKHPEVPTPATGGQQEPSIPDDTTQTRSVKASRPEP
GTQPAGGAAAEEPHKEEESQVAPFVRSRPLTPPEMREASKSEDQACVASLEGEVAAKLSQ
SQGKTGHIKDGQEEGCSEPPGEAKDAEQLPRRVTKEPSKPVAVVSERLRSLRSFAAASSP
FTLPEVRSRHGRVGSADRDGPSEPVAPPGRRRGLRQRSNPTLYMGEPEKRAEEPKAEETN
RTKTPSKGQTAATIHQGRPRRSQRGSCSATKPEEETATAAGNPGTVESQSTRKRRATAAT
KPMEEEQPKHRRTRSSSRLGGTSETTASPKDAGKGTKVRQGPAPSIPFSGRRLRPLRTES
ETIETTRSRLLSSTTSAVPGPKVLFTGVIDEEGERVVTELGGSLAESVIDCTHLVTDRIC
RTVKFLCALARGIPIVTLDWLEKSKRNSFFLAPNSFLVRDPDQEKNFQFSLAKSLQKARQ
KGGLLQGYELHVTPNVKPEPEHMRDIIKCSGGTFLPRMPRAYKDKRVVISCLEDLPRCRP
AQDAGVPIANSEFILTGILQQKVDLEAHRLGTPDGPCRASPAALTTRAGKRRAAMPTSPA
PPSTAKRRR
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggaccaaactcagctgttggactggcctggagagagcgatgctgaagatccttcttct
gatggggctgggggttgtggggagaaccccaaacctgtggggcgcctccacctcctgagc
agcaagtatggggctgagaaggatttttggatctacccagggaagaatgtcattggccgg
cttgaaagctgccagatctgcttgccagtctcttcagtttcaaaggctcatgccgtcatc
gaggtcccctctcccggaggaccccaccttttgtacgaccaggagagcctgaaccgcacc
cggcggcagcgtatgttgttgatcccgcaggtccgctacagcctgcaggatggagacact
ttggtctttggagatgtggggtgccagtacttcatgcttgatccggagggcggcctggaa
tcctcagatgactccatggtggtgccacccacccaggcaaccacagataccaatgccctg
gttattgaggagacgcctgtgccggggaggaagatgggctttgggcgcttcctggtccag
gattcggatagagaggaggaaggcgaggaagtggtcaatgggggaggcaaggtcctgcat
cttccatcggaggatgggtctgattcctctgtcaaacacggtgcaagaggacactgcagt
tcggcctccatgttctctccgtcctttgctaccgtagtgcctgaaagcgatgaagaaagc
ggtgaaccttcggaaggagacctctcttgtccctccttgcgtctgcgctgcgagagggcc
gaggctgagccacattctttggcgaacggtgcttttccctccctgaaccaggaaacacat
cctatacagccaggaagctcagaggctaaagttcctccagactccgggggacaaccagaa
gctaaagaccaggatgtgtctgcagatccgagtctcacgggcttccacctggacagcgac
acagatgtggaagacgaagagggagtttgtaccacttctgaaggagccacagtgaaagac
ggccttgctcttgaactggacagtgacccggacgtcgacgaaccctcgctggcgaagaca
ggcgctgcctctgcagggaacggacaattggccagtgacgttgacagtgagacaggcata
gaggaggcagagaagaaaccaagcgtgttggacttaaaggcccaccaagtcaccgaaaat
ggggacagcgacacagatgtggaaggggcggtgggcagtccagaggttgcctctcccgaa
agccaagcttctactctccgatgtgagagcaccctgaaaagcgaggaaagggcgggcagc
ggtccagaaggtggccggcctgatgaggaggtggaccgtgatacagatgtggaagctgtg
gaggatccagatgtgggcccgaggagtgagctgcccactaaaaaggaggatgacgacaca
gatgtggaggagccgtccccggggccagggaatcaagaggtcgccgcgaaggaccgcgag
gcttctagtgacagcgatacagatgtggaggtggccgacttggagccggaggggttaggc
gggacccgtccccacggccccccgcctacgaggcataaagacggtgatacagatgtggaa
gaaatcagggggatctgccagcaggataacagagatctgactgaggcaagggggataaat
gtcaccagcgtggaatccgcaaagagagatggagctgcttgtgaacggtccgggggcttg
cgtgtgggggaacccctcccagacactgagattgtggagccgctgacctccgtgcctgaa
agtcaacgcttgcttgatatatctctgggcagtgacacagatgtcgaggaagctgctgag
gatccggatgcgagctcaaagggaaaccgcccagtcgccagcgatggctccggtggagga
gaccgaggcagctgccatgggaacctagaggcggggcctagggaaggtgaggacagcgat
accgacgtggaagtgacttccccgtcccccgagacccgtgcagctcacgacagcgatacg
gatgtggaggtggtagcctccgcattgccggagaaacccttggaagagcaagatactcag
ttggtccttgtgggaccctcagcaggtgcggaggaagcagctcgctctgcgaaggaacgg
gaggccagccatgatcttggcaaagaggatggagataccgatgctgaaggaaatgaatcc
cgtccaggtgacaagagcagcacagatgatgaagatgatcctgacctgactgtccaggca
acacagtgttacctccctgacgttacctcctctcccaaggctgagaaggcagcagactcc
agacgtgcccttgaagaagaggctacccaagcatttgcctttcgatccccctcgagtttt
gccaggttccatcccaggaaaatctgcaactctcctttgaaagaggaagatccagatctg
tacatgctggaagccacccagccgttctgcagagaggctccatcactctcggaggagccc
actcaggccttcgttgccgaagaggaggaagctacccaactgtttgtccagcagtccctt
gaagggggacaggcgaaacatcctgaagttccaactccagccactgggggtcagcaggaa
cccagcatccctgacgacacaacccaaacccgctctgtaaaagcgtcccgtcctgagcct
gggacacaaccagcagggggcgcagctgcagaggaaccccacaaggaagaggaaagtcaa
gttgctccttttgtcagaagtcgacctttgacaccgccagagatgcgcgaggcttccaag
agtgaggaccaggcatgtgtggcgtctcttgaaggggaagtcgctgcaaaactgtcccag
tcccagggaaagacaggccacattaaagatggacaggaagaagggtgctcagagccgcct
ggagaagcaaaggatgctgagcagctgccacggcgtgtcacaaaggagccttccaaacca
gtggctgtggtctctgagcggctgcgcagcctgcggtcttttgctgctgcctcctccccc
ttcaccctcccagaagtacgcagccgccatggccgggtgggatcggcggaccgcgacggc
ccaagtgagccagttgctcccccaggtagacgtagggggctgcgtcagcgcagcaatccc
acactgtatatgggggagccggagaagagggcagaagagcccaaggcagaggaaacaaac
cgcaccaagacgcccagcaaagggcagacagcagcgactatccatcaaggcagacccagg
cgttcacagcggggctcctgctctgccactaaacctgaggaagaaacagcaacagctgca
ggcaacccagggactgtggagtcccagagtaccaggaaacggagagccacagctgccacc
aagcctatggaagaagagcagccaaaacaccgtaggacccggtccagcagccgtttgggg
ggcacttcagagacaacggcaagcccaaaggatgctgggaaaggcaccaaagttaggcag
ggacccgcgccatccattccattttctgggaggaggttgcggccactgaggacagaaagc
gagactattgaaacgacgcggagccgattgctgagttcaaccacctctgctgttccaggg
ccaaaggtgctgttcacgggggtgattgacgaggagggggagcgcgtggtcacggagctg
gggggctctttggcagagtctgtcatcgattgcacccaccttgtaacagaccgcatctgc
cggacagtcaagttcctgtgtgctctggctcgaggcattcccattgttacccttgactgg
ctggagaagagcaagcgaaactctttcttcctggcaccgaatagcttccttgtccgagac
cccgatcaggagaagaacttccagttcagcctcgccaagtcccttcagaaggcccggcaa
aagggaggcctacttcagggctatgaactccacgtcactcctaacgtcaagccggaacct
gagcacatgagagacataatcaagtgcagcggggggactttcttacccagaatgcctcgg
gcctacaaggacaaacgtgtcgtcatctcctgcctggaggacctgcctcgctgcagacca
gcacaggatgccggggtccccatcgccaactcagagtttatcctgacggggatattacag
cagaaggttgacttggaagcccaccgcctcggcactccggacggcccctgccgcgccagc
cctgccgctctcaccacgagggccggcaagaggagagctgcgatgcccacgagtccagcc
ccacccagtacagcaaagagacggcgctga

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