KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125429880
Entry
125429880         CDS       T08213                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:stow00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:stow01009]
    125429880 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stow03036]
    125429880 (KDM5C)
Enzymes [BR:stow01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125429880 (KDM5C)
Protein phosphatases and associated proteins [BR:stow01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125429880 (KDM5C)
Chromosome and associated proteins [BR:stow03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125429880 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD Collagen
Other DBs
NCBI-GeneID: 125429880
NCBI-ProteinID: XP_048347379
LinkDB
Position
LG03:176866448..176893554
AA seq 1614 aa
MEPREEQGEPSEGGDQGAWGKEKGPPGDQADCGARGEKGERGARGTRGEQGDGGERVPRA
ARGERGARGERAEPGDGGPRGLRALREADRGSWGAEPGDWGERGPPWAGGEPEPPLPPED
FLPPPECPVFEPSWAEFSDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTP
RIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVMEEGGYEA
ICKDRRWARVAQRLSYPSGKNIGSLLRSHYERIIYPYEMYQSGANLVQCNTHPFDNEEKD
KEYKPHSIPLRQSVQPSKFNSYGRRAKRLQQEESESCPESVSTPALVPEQAPQAWPEPTE
EDIEKNPELKKLQIYGAGPKMMGLGLVAKDKNMRKKDKEMPECPPTVIVKEEAPVPETKL
EPASPRGYANMKEELRHSPEPCTKMTMRLRRNHNTQFIESYVCRICARGDEDDKLLLCDG
CDDNYHIFCLLPPLPEIPKGIWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSF
KADYFNMPVHMVPTEFVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPINDGKRKLSP
EEEEYAASGWNLNVMPVLKQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSIN
YLHWGEPKTWYGVPSFAAEHLEDVMKKLTPELFESQPDLLHQLVTLMNPNTLMAHGVPVV
RTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSH
EELICKMAACPEKLDLNLAAAVHKEMFILVQEERKLRKALLDKGITEAEREAFELLPDDE
RQCDKCKTTCFLSALACYDCPDCLVCLYHIDDLCKCPSNRQYLRYRYTLDELPTMLHKLK
VRAECFDTWANKVRIALEVEDGRKRTLEELRALESEARERKFPENELLHRLKSCLSEAEK
CVSEALGLLSSQETGEAAVHMTVEELRAFLEQMSNLPCVIHQIKEVQGLLEKVEAFQVDV
QEALQDLPGNSPELHKLLAQGTQLGVEVPEMELLERQVQQAVWLEEVKQTLRSPQEKVTL
SVMRALITSGCGVAASPAVDKAMAELQELLTIAERWEEKAQMCLEARQKHPPATLEAIIK
EAENIPVHLPNILSLKEALSKAQAWIADMEEIQNGDHYPCLDDLEGLVAVGRDLPVCLEE
LRHLEVQVTTAHSWREKASKTFLKKNSCYMLLEVLCPCADADSDSVKRTKWQREREPGLY
KSDTESLGLSAQELRDPGSVILAFKEGEQKEKAGILCLRQSNAQKPVPSAHSPPGGQYCV
CSQPPSPAMLQCELCQDWFHTTCVAWPRLGTPRPSPAWWEWEAKFLCPLCQRSRRPRLET
ILALLVALQKLPVRLPEGEALQCLTERAITWQDRARQLLASSEVTAALECLAALRQRLLG
DPAKEAGALKESSCNEQTKVSLENGDSAAPEKNGSYASDLETLCSYLPRLQGPVLELPEA
TRHSLEELLMEGDLLEVTLDESQSIWRLLQAACAPQTDKFRQLLELEQAERRATRARGRE
TERRRKRKTDRSDYPTLPKEELEPKKIRGTDSALTQGGAPPSAGTDCSHNGVGL
NT seq 4845 nt   +upstreamnt  +downstreamnt
atggagccccgagaggagcagggcgagccgagcgaagggggcgaccagggggcctggggg
aaggagaagggccctccgggggatcaggccgactgcggggcccggggggagaagggcgag
cggggggcccgcggcacacggggggagcagggagacggcggggagcgcgtccccagggct
gccaggggcgagcggggggccaggggcgagagggcagagccgggcgatgggggtccccgg
ggcctgcgggcgctgcgagaggcggatcggggctcgtggggggccgagccgggcgactgg
ggggagcgggggccgccttgggccggcggggagccggagccccccctgcccccggaggac
ttcttgccgcctcccgagtgccccgtctttgagcccagctgggcggaattcagcgaccct
ctgggttacattgccaaaatccggcccatcgcggaaaaaagtggcatctgcaagatacgc
ccccctgctgactggcagcctccctttgctgtggaagtggataacttccggtttacccca
cggatacagaggctcaatgaattggaggcacagaccagggtgaaattgaactacctggac
cagattgccaagttttgggagatccaaggctcctcgctgaaaatccccaacgtagagagg
cgaattcttgatttgtacagcctaagcaaaatcgtgatggaggaaggtggatatgaagcc
atctgtaaggaccgccggtgggcacgagtggcccaacgcctttcttatccatcaggaaag
aacatcggctctcttcttcgctcccactatgagcgcataatttacccttatgaaatgtac
cagtcgggtgccaatctggtgcagtgcaacacccacccatttgacaacgaggagaaggac
aaggagtataagcctcacagcatcccattgcgtcagtcagtgcagccttcaaagttcaac
agctatgggcgccgggccaagcgtctgcagcaggaggaatccgaatcgtgccctgaatct
gtcagcaccccagctctggtacccgagcaagcgcctcaagcatggccggagccaacagaa
gaagacatcgagaagaacccagagctgaagaaactgcagatctacggcgctggccccaaa
atgatgggcttggggctcgtggccaaagacaaaaacatgcgcaaaaaagacaaagagatg
ccagagtgccctcctacagtgatagtaaaagaggaggcccctgttcccgagacgaaactg
gagcccgcctctccccgtggctatgcaaatatgaaagaggagctgaggcacagtccagag
ccttgcaccaagatgaccatgcgtctgcgtcgcaaccacaacactcagtttatcgagtcg
tacgtttgtcggatctgcgcacggggggacgaggacgacaagctgctgctgtgcgacggc
tgcgatgacaactaccacatcttctgcctcttgccacccttgcctgagatccccaaaggc
atctggaggtgccccaaatgcgtcatggcggaatgcaagcggcccccagaggcatttggt
tttgagcaggccactcgggagtacacgctgcagagctttggggagatggccgattccttc
aaagctgactacttcaacatgcctgtacatatggtgcccacggaatttgtggaaaaggag
ttctggcgcctggtgaacagcattgaagaggacgtgaccgtggagtatggtgctgacatc
cactccaaggagtttggaagcggcttccccatcaatgacggcaagaggaagctctcccct
gaggaggaggaatacgcagccagcggttggaacctcaacgtgatgccggtcctgaagcag
tcggtgctgtgccacatcaacgccgatatttcgggcatgaaggtgccgtggctctacgtg
ggcatggtcttctctgctttctgctggcacattgaagatcattggagttactcaattaac
tacctccattggggtgagcccaagacttggtatggtgtcccatcttttgctgccgaacat
ctggaagatgtcatgaagaaattaaccccggaactgtttgagagccagccagacctgttg
caccagttggtgacactcatgaaccccaacacactcatggctcacggagtcccggtggtc
cgcaccaatcagtgcgctggagagtttgtcattaccttccctagagcttatcacagcggt
ttcaaccagggctacaactttgcggaagcagtcaacttctgcactgctgactggttgcca
gccggtcgccagtgcattgagcactaccggcgactccgccgctactgtgtcttctcgcat
gaggagctgatctgcaagatggccgcctgtccggaaaagctcgacctgaatttggcggca
gctgtgcataaggagatgttcatcttggtgcaggaggagcgcaaactacggaaggctctc
cttgacaagggtatcaccgaggcagaacgagaggcctttgagctgctcccagacgacgag
cgtcagtgtgataagtgcaaaacgacctgcttcctctcggcactggcttgctacgactgt
ccggattgcctcgtctgcctctaccacatcgatgacttgtgcaaatgccctagcaacaga
cagtacctcaggtatcggtacaccctggatgagctcccaactatgttacacaagttgaaa
gttcgggcagagtgctttgatacctgggctaacaaggttcggattgctctggaagtcgaa
gatggacgcaagagaaccttggaagagctacgcgccttggagtcggaggcacgggagagg
aagttccccgaaaacgagctgcttcaccggctcaagtcctgtttaagtgaagctgagaag
tgtgtctcggaggctctgggtctgttaagcagccaagagactggggaagcggccgtccat
atgacagtggaggagttgcgtgccttcctggagcaaatgagcaacttgccttgcgtcata
caccagatcaaggaagtccagggcctgctagagaaagtggaagccttccaagtggacgtc
caggaggccctgcaggatctccccggcaactccccagagcttcacaagctgctcgcccag
gggacgcagctaggggtggaagtgcctgagatggagctgctggagcggcaggtgcaacag
gctgtctggctggaggaggtgaagcagacactgcgttctccccaggagaaagtcaccctc
tctgtgatgagggcgctcatcacctctggctgtggggtggccgccagtcccgccgtggac
aaggccatggctgagctgcaagagctgctgaccattgcagagcgctgggaggagaaggcc
cagatgtgcttggaggccaggcaaaagcacccgcctgccaccctagaggccatcatcaag
gaagctgaaaacatcccggtgcacctgcccaacatcctgtccctcaaggaggcgctttcc
aaagcccaggcgtggattgcggacatggaggagatccagaacggggaccattacccctgc
ctggacgacctggaggggctcgtggccgtgggcagggatttgccagtctgcttggaggag
ctgcgccacctcgaggtgcaagtgaccaccgcccactcctggcgggagaaagcctccaag
actttcctcaagaagaactcctgctacatgttgctcgaggtgctgtgtccatgtgccgac
gccgactctgacagtgtcaaacgcaccaaatggcagcgggagagggagccgggcctgtac
aaatccgatacagagagtctgggcctctcggcacaagaactccgggatcctggctctgtt
atcctggccttcaaagagggtgagcagaaggagaaagcagggatcctctgccttcgccag
tccaatgctcagaagcccgtgccgtcggctcacagtcctcctggggggcagtactgtgtg
tgttcccagcccccaagccctgccatgctgcagtgtgaactgtgccaggactggttccac
accacctgtgtggcttggccccgcctgggcaccccccgcccctctccagcatggtgggaa
tgggaagccaagttcctctgcccactgtgccagcgctcccgccggccccgcctggagacg
atactggcactgcttgtggctctgcagaagctgcccgtgcggctacccgagggagaggcc
ttgcagtgcctgacagaacgagccattacgtggcaggaccgggcccgccagctccttgcc
tcctctgaagttacagccgccttggagtgtttggcagcgctacggcagcggctgctcggg
gacccggccaaggaggcaggagcactcaaagagagtagctgcaatgaacagaccaaggtt
tccttggagaacggggactctgcagcaccagaaaagaatggctcctatgcctcagacctg
gagacactctgctcgtacctgccgcggctgcagggccctgtgctggagctgccagaggca
actcgtcactccctggaggagctgctaatggagggggatcttctggaggtgacgctggac
gagagccagagcatctggcgcctgctgcaggctgcctgcgccccccaaaccgacaagttc
cgccagctgctcgaactggagcaagcggagcggcgggccacccgtgcgcggggccgagag
acggagcggcggcggaagcgcaagacggatcgcagcgactaccccaccctgcccaaggag
gaattagagccaaagaagatccgggggacagactcagcgctgacccagggtggggcccct
ccttcagcaggcacagattgcagccacaatggagttgggttgtga

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