KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125429928
Entry
125429928         CDS       T08213                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013  Nucleocytoplasmic transport
stow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125429928 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    125429928 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stow03019]
    125429928 (THOC3)
   03041 Spliceosome [BR:stow03041]
    125429928 (THOC3)
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     125429928 (THOC3)
Spliceosome [BR:stow03041]
 Complex C
  Other components
   EJC/TREX
    125429928 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    125429928 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_EML WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_Vps41 eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_NOL10_N WD40_MABP1-WDR62_1st RMC1_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Tricorn_2nd Beta-prop_SPT8 Beta-prop_NUP159_NUP214 TRM82_WD B-prop_COPA_B_2nd Beta-prop_ACSF4 PAC11 ASA1 Beta-prop_EIPR1 Beta-prop_WDR75_1st PD40 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_LRRK2 Beta-prop_Nup120_160 MIOS_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 125429928
NCBI-ProteinID: XP_048347486
UniProt: A0ACB8EIC4
LinkDB
Position
LG03:74039393..74044868
AA seq 351 aa
MTSRKRDLCRRKGKRVNELGSAESGSVAMALSPYVLAMQELFRANTRSREFPAHGAKVHS
VAWSCCGSRLASGSFDKTASVFVLDKDRLVKENNYRGHNDSVDQLCWHPTNPHLFVTASG
DKTIRIWDVRTTKCIAPVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTYRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPIQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGEK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgacgtcacggaaacgtgacctttgtcgccggaagggaaagcgtgtgaatgagttgggt
tcggctgaatccggttcggttgccatggcgctgtctccgtacgtgctggctatgcaggaa
ttattccgggcaaacacgcggagccgcgagttccccgcgcacggggcgaaggtccactcg
gtggcttggagctgctgcggcagccgcctggcgtctggctccttcgacaagaccgcgagc
gtcttcgtgctggacaaggaccgcttggtgaaggaaaataactaccgtggccataatgac
agtgtggatcagttgtgctggcaccctactaacccacatttatttgtcactgcatctgga
gacaaaaccatccgtatatgggatgtccgcactactaagtgcattgctcctgttaacacc
aaaggggagaacattaatatctgctggagtcctgacgggcagactattgcagtagggaat
aaggatgatgtggttactttcattgatgcaaagacatatcggtctaaagctgaggagcag
ttcaagttcgaagtgaatgagatctcttggaataatgacaacaacatgtttttcctcacc
aatggcaatggctgcatcaacattctcagctatccagaactcaaacctattcagtcaata
aatgcccatccctcaaactgcatctgcatcaagtttgatccaatgggaaagtatttcgct
acaggcagtgccgatgcactggttagcctctgggatgtggatgagctagtgtgtgtgcga
tgcttctctagactggattggcctgtgaggacattgagcttcagccatgatggaaaaatg
ctagcctcagcttctgaagatcattttatcgatattgctgaagtggaaacaggggagaag
ctctgggaagtacagtgtgagtccccaaccttcacagtggcttggcacccgaagaggcct
ctactggcctttgcgtgtgatgacaaggatggaaaatatgacagcagcagggaagctggc
actgtgaagctctttggtctccctaatgactcttaa

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