Sphaerodactylus townsendi (Townsend's least gecko): 125430091
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Entry
125430091 CDS
T08213
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125430091 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125430091 (SMARCA4)
03036 Chromosome and associated proteins [BR:
stow03036
]
125430091 (SMARCA4)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125430091 (SMARCA4)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125430091 (SMARCA4)
Chromatin remodeling factors
BAF complex
125430091 (SMARCA4)
PBAF complex
125430091 (SMARCA4)
GBAF(ncBAF) complex
125430091 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
125430091
NCBI-ProteinID:
XP_048347793
LinkDB
All DBs
Position
LG03:159431396..159547603
Genome browser
AA seq
1644 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPPQG
PGGYSQDNMHQMHKPMESMHEKGLSDDPRYSQMKSMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMPSGPGGVPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGAGPAPGP
TPPNYNRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP
PQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPV
EILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM
RRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAK
DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ
KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEAAEGQTPVMGPDGE
PLDETSQMSDLPVKVIHVESGNILTGTDAPKAGQLDAWLEMNPGYEVAPRSDSEESGSEE
EEEEEEEEQPQPSQPSLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALA
RGLQSYYAVAHAVTERVDKQSSLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGK
TIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV
PQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYIAPR
RLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILII
RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD
KKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELL
DRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEP
GSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLC
TVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDETRHSTGS
GSGSTSFSHAASTLCLNSDSEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRR
EEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE
KQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDVDVGSSTPTTSTRSRDKDDDNKKQKK
RGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIR
KPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQ
KIEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRMKGRRRTSRGSRAK
PVVSDDDSEEEQEEDRSGSGTEDD
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgatcctcccatgggaggaacgcctcgccctgggccttctcctgggcct
gggccttctcctggtgctatgctgggccccagccctggaccgtcccctggttctgcacat
agcatgatgggccccagccctgggccaccgtcagcagggcacccaataccaccacagggg
cctggaggttattctcaggacaacatgcaccagatgcataagccgatggagtccatgcat
gagaaaggactgtctgacgaccctcgttacagccagatgaagagcatggggatgaggtcc
ggtgggcacacagggatgggtccccctccaagccccatggatcagcattctcaaggctac
ccttccccacttggtggctctgagcatgcttcaagtccagttccggctaacggtccttct
tccggcccccagatgccctctggtcccggaggagttccgttagatgggtctgacccacaa
gctcttgggcagcagaatcgtggcccgactccttttaaccagaatcagttgcatcagttg
agggctcagatcatggcttacaagatgcttgccagaggacagcctctacctgaccacctt
caaatggctgtgcaagggaaaaggcccatgcctggaatgcagcagcaaatgccaactcta
cctccgccctctgtatctggaacagggccagtgcaaggagcagggcctgcaccggggcca
acacctccaaactacaacagacctcatggtatgggagggcctaacatgccccctcctgga
ccctcaggagttcccccaggaatgcctgggcagcccccaggtggacccccaaagccctgg
cctgaaggacccatggccaatgctgcagccccaactagcacccctcagaagctaattcct
cctcaaccaacgggccgtccttcaccagcacctcctgcagtacctccagcagcatcccca
gtaatgcctccccagacccagtcacccgggcagccagcccagcctgccccgatggtgcag
ctccatcagaagcaaaaccgcatcactcccatccagaagccaagaggactggaccccgtc
gaaatcctccaagagagagaatacagactgcaggctcgcatcgcccacagaatccaagaa
cttgaaaaccttcctgggtccctggctggtgacctgcgaaccaaagctaccattgaactt
aaagcactgcggctgcttaacttccagagacagctgcgtcaagaggttgtggtgtgcatg
aggagagataccgctctggagacagcgctgaacgccaaggcttataaacgcagcaagcgg
cagtccttgcgggaggctcgcatcacggagaaattggagaagcagcagaagattgagcaa
gaacgcaaacgtcggcaaaaacaccaagaatacctcaacagcattctccagcatgccaag
gatttcaaagaataccaccggtctgttacgggcaagattcagaaactcacgaaggcggtg
gccacgtatcatgccaacacggaacgcgagcagaagaaggagaatgaaagaattgagaaa
gagaggatgcgcaggctgatggctgaagacgaagaagggtatcgaaagctgatcgatcag
aagaaagataaacgcttagcctacctgctccagcagaccgacgagtacgttgccaacctc
acagagctggtgaggcagcacaaggctgctcaggttgccaaggagaagaagaagaagaag
aaaaagaagaaggctgaagctgcagaagggcagacgccagtaatgggacccgatggtgag
cctttggatgaaactagccaaatgagtgacctcccggtgaaggtgatccacgtagaaagc
gggaacattcttactggcacagacgcgccaaaggcagggcaactggacgcttggttagag
atgaatcccggatatgaagtagctccgagatctgacagtgaggaaagtggatcggaggag
gaggaagaggaggaagaagaggaacagccgcagccgtcccagccttctttgcctgtggaa
gagaagaagaagattcccgatccagacagtgatgacgtgtctgaagtggatgccaggcac
attatagagaatgctaagcaggatgttgatgacgagtatggagtgtctcaagccctggca
agggggttgcagtcttattatgcggtggcccatgcagtcactgaaagggtggacaagcag
tcctcgctcatggtgaacggtgtcctcaaacagtaccagattaaaggcttggaatggctg
gtatccttgtacaataataatctgaacgggatcctggcggatgaaatgggtctgggcaag
acaatccagaccattgctttaattacatacctcatggagcacaaacgcattaacggaccc
ttcctcattatagtacctctgtcaactctatcaaattgggcatatgaatttgataaatgg
gctccttccgtggtgaaggtttcatacaagggctctccagctgcaaggcgggcatttgta
cctcaacttcgaagtggaaaatttaatgtcttgctcactacatatgaatatatcatcaaa
gataagcatatcctcgcaaagattcgttggaagtacatgattgttgatgaaggtcacaga
atgaaaaaccaccactgcaaactcacccaggtcctgaacacgcactacatagctccacgt
cgtttgctgctgacggggacgccactccagaataagttgccggaactgtgggctctgctc
aacttccttcttccaacgatcttcaagagttgtagcacatttgaacagtggtttaacgct
ccatttgccatgactggagaaaaggtggatttgaatgaagaagagactattctaatcatc
cgtcgtttgcacaaagtgttgcgtcccttcttgctgaggaggttaaagaaggaggtggaa
gcccagctgccagaaaaggtggaatacgtcattaaatgcgatatgtctgcattgcaaagg
gtactttataggcacatgcaggccaagggagtgctgctcacagatgggtcagagaaggat
aaaaagggtaaaggcggtacaaagacacttatgaacactattatgcagctgaggaagatt
tgcaaccatccttatatgtttcagcatatagaggaatccttttctgagcacttgggcttc
actggcgggatcgtgcaagggcttgacttgtatcgcgcgtctggcaaattcgagctcctg
gatcgaattctgcccaagctacgagccaccaaccacaaggtgctgctattctgtcagatg
acctctctcatgaccattatggaggactattttgcttaccgtggcttcaaatacctcaga
ctagacgggaccactaaagctgaagatcgtggcatgctgctgaaaactttcaatgagccg
ggctctgagtatttcatatttttgctgagcacccgtgccggagggctggggctgaatcta
cagtctgctgatacggtgataatttttgacagtgactggaaccctcaccaggacctacaa
gcccaggaccgagcccatcgcatcgggcagcagaacgaagtgcgggtgttgcgcctctgc
accgtcaacagcgtggaagagaagatcctggccgcggccaagtacaagctgaacgtggat
cagaaggttatccaggcgggcatgtttgaccagaaatcctccagtcacgagagaagagcc
ttcctccaggctatcttggagcacgaggagcaggatgagaccagacacagcacaggcagc
ggcagtggcagcacaagcttttcccatgctgcctcaaccctgtgcctcaactccgactcg
gaggagccacctttaaaggaagaagatgaagttcccgatgatgaaacggtgaaccagatg
atcgcccggcatgaggaggagtttgatctttttatgcgcatggatctggatcgcaggcga
gaggaagcccgcaatccaaagcggaaaccccgcctgatggaggaggatgagttgccctct
tggatcattaaagacgatgccgaagtggagaggctcacgtgcgaggaggaagaagagaaa
atgtttgggcggggttctcgacaccgaaaagaggtggactatagtgactcgttgactgag
aagcagtggctcaaggtatacatggctatcgaggaggggaccctggaggagattgaggag
gaggtgcgccagaagaagtcctcccgcaagcgcaagcgcgacgtggacgtcggctcctcc
acccccaccaccagcactcgcagccgagacaaagacgacgataacaagaagcagaagaag
cgcggcaggcctcccgccgagaagctctccccaaaccctccgaacctcaccaagaaaatg
aagaagattgtggatgcggtgattaaatataaagacagcagcagtggacggcagctcagc
gaggtcttcatccaacttccttctcgcaaagagcttccagagtattatgagctcattcgc
aagccggtggattttaagaaaataaaggagcgaatccggaaccacaagtaccgcagcctg
aacgatctggagaaggatgtcatgctcttgtgtcagaacgcacaaacattcaaccttgag
ggctctttgatctatgaggactcgattgtgttgcaatccgtctttaccagcgtgaggcag
aaaattgagaaagaggaagacagcgaaggggaggagagtgaagaggaggaggaaggagaa
gaggaaggatcggaatcggagtctcgttctgttaaagtgaagattaaactaggcaggaag
gagaaagcacaagaccggatgaagggccgaaggcgcacgagccgtggttcccgggccaag
cctgtcgttagcgacgacgacagtgaagaggaacaagaggaggaccgttcaggaagtggc
acggaagacgactaa
DBGET
integrated database retrieval system
