Sphaerodactylus townsendi (Townsend's least gecko): 125430133
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Entry
125430133 CDS
T08213
Symbol
DCAF1
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stow01001
]
125430133 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125430133 (DCAF1)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125430133 (DCAF1)
Protein kinases [BR:
stow01001
]
Serine/threonine kinases: Other
Other
125430133 (DCAF1)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125430133 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
125430133
NCBI-ProteinID:
XP_048347870
LinkDB
All DBs
Position
LG03:67252903..67304165
Genome browser
AA seq
1508 aa
AA seq
DB search
MTSGSGYLDSKAELTALLEQWEKDHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPDCMLGHLLRILFKNDDFMNALVNSYVMTSREPLLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVAFVLRRSR
ELQVSEMNTKQDNKRLSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVTGDMEISFNL
DSSHKTSSRVNSATKRSGKQQRENFRKAKQKLGFSSEPEKMFVELSNSSWSEMSPWVVGT
NYNLHPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLKRTNDVLLTFES
LKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHP
HNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLE
ILNLEDQGALLSDDEIFASRQTGKHTCMAMRRYFEAHLAIKVEQVKQSLQRTEGGILVHP
QPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEIFLKLSCVQLMLQLISIACDWKTYY
ARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHD
AEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPRSSEHTLAKMWNVVQSNNG
IKVLLSLLSVKMPITDADQIRAFACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPV
LQDKRSEHVKFCKKHASLRLIELPASGKKKTLLDRNGSPHFGLDFAEKQDAVAQLQAIFP
XEARFGALLLIRNHLISKGLGETATILTKEADLPMTAASHSSAFTPVTAAAAAASPVPLP
RTPRIANGISARLTGHAAVASSAASVHAQPKQAAPQSSLALPGPSHANNSPLIGRISFIR
ERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKN
PVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFR
PISVFREANEDESGFTCCAFSARERFLMLGTCTGHLKLYNVFSGQEEASYSCHNSAITHL
EPSRDGSLLLTSATWSQPLSALWGMKSVFDIKHSFTDDHYVEFSKHSQDRVIGTKGDIAH
IYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMT
ISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDL
LEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDALNMD
TVCRLYEVGRQRLAEDEEDEEEDQEEEEQEEEDEDEDDDDTDDLEELDTDQLLEADLEEE
ETNENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLED
DIILSLNE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggttctgggtatctggattctaaggcggagcttactgctttgctggagcag
tgggagaaagatcatggcagtggacaagacatggtccccatccttactcgaatgtcagaa
ttaattgagaaagaaactgaagagtatcgtaagggagatccagatccatttgatgacaga
catccaggtcgagcagatccagactgtatgcttggccacttgctgagaatactgttcaaa
aatgatgatttcatgaatgcactggtgaattcttacgtgatgacaagcagagagccactt
ttgaacacagctgcctgccgactccttctggacatcatgcctgggctggagactgcagtt
gtctttcaagaaaaggaaggcattgttgagaatcttttcaagtgggcacgtgaggctgat
cagccattgagaacatatgcaactggattgctgggaggtgccatggagaaccaagatatt
gcagccaactacagagatgagaattctcagctggtggcgtttgtgcttcgacgttcacga
gagcttcaggtcagtgaaatgaatacaaaacaggataacaagcgcctcagtccccgaaaa
gtaccctcagaccctcttttacctcttgatgaagaggctgtggacatggactatggagag
atggctgtggatggtgaacaggaggaagttacaggggatatggaaatctcatttaatctt
gattcaagtcacaagacaagtagtcgggtaaattctgccacaaaaaggtctggaaaacaa
caaagagagaattttcggaaagcaaaacaaaaactgggcttttcttcagagccagaaaag
atgtttgttgaactgtctaatagcagctggtcagagatgtctccatgggtggttggcacg
aactataacttgcaccctttgacccctgctattgagcaaagattaattctgcagtacctg
actcctctcggggagtaccaagagttgctgcccatcttcatgcaacttggatcaagagaa
ctgatgatgttctatattgatttgaaacgaaccaatgatgtcttactcacttttgaatcc
ctaaagcacttggcatctctgcttcttcacaacaagtttgctacagagtttgttgctcat
ggaggagtgcagaagttactggagattcctcgtccttcaatggcagcaactggtgtctcc
atgtgcttatattacttgtcttacaatcaagatgccatggagagggtgtgcatgcatccc
cacaatgtgttatcagatgttgtgaactataccctgtggttgatggagtgctctcatgcc
tcaggctgctgccacgctaccatgttcttctctatttgtttctcattccgtgcagtcttg
gagctctttgataggcatgatggcttaaggcgcctagttaacttgatcagcactcttgag
atcttaaacctagaggaccagggtgcgttgttaagtgatgatgaaatctttgccagccgc
cagactgggaaacacacttgcatggccatgcgcaggtattttgaggcgcaccttgccatc
aaagtagaacaggtgaaacagtcactgcagcgcacagagggcggcattctggtccatcca
cagcctccatacaaggcttgttcctacactcatgaacagattgtagaaatgatggaattt
ctaatagaatatggacctgcacagctgtattgggagccagccgagatatttctcaaactg
tcctgtgtgcagcttatgcttcagcttatttcaatagcatgtgactggaaaacctactat
gccaggaacgatacagttcgttatgctttggatgtcctggccatccttactgtagttcca
aagatccagttacaattagcagagcccgtggatgtgttggatgaggcaggatctactgta
tccactgtgggtattagtatcatcctgggagttgccgaaggtgaattcttcatccacgat
gcagaaatccagaagtcggcccttcagatcatcattaactgtgtgtgtggcccagacaat
cgcatctccagcattggcaaattcatctccggcacccctcgacgtaagcttccccaggcg
cccaggagtagcgagcacacattggccaagatgtggaatgtggtgcagtccaacaacggc
atcaaagtgctgctgtcgttgctgtctgtaaaaatgcccattacggacgcagaccagatc
cgagcttttgcttgcaaagccttggttgggctgtctcgtagcagcacagtccggcagatc
atcagcaagctgcccctcttcagcagctgccagatccagcagctgatgaaggagcccgta
cttcaggacaagcgcagcgagcacgtcaagttctgcaaaaagcacgcttcgctgaggctg
atagagctgccagcttcaggaaaaaaaaaaaccctgttggatcggaacggatcgcctcac
tttggcctcgacttcgcagaaaagcaggacgcggtggctcagcttcaagcgatttttccc
tgagaagcgcgctttggagcgctcctcctgatcaggaaccatctcatctcaaaagggctg
ggagaaacggccacaatcctcacaaaagaggcagacctgcccatgacagcagcttctcat
tcctccgccttcaccccagtcactgctgccgctgccgccgcttctcccgtgcctctgcct
cgtacccctcgtatagcaaatggtatttcggcccggttgaccggccatgccgctgtggct
tccagtgctgcctctgtccacgcccagcccaagcaggctgccccccagagctcacttgct
ctcccgggtccatctcatgccaacaactccccgctgattggcaggattagcttcatccga
gagaggccgtctccctgcaatggcaggaaaatcagagtgctgcggcaaaagtcagaccac
ggtgcctacagccagagcccagccatcaaaaagcagttggacaggcacctcccttcccct
cccacgctggacagcataatcacagagtaccttagggagcagcatgctcgctgcaagaac
cctgtggcaacttgcccccccttttctctctttacaccccaccagtgtccagagccaaaa
cagaggcgccaagcgccaactaactttacctcgcgtctaacccgcagggcagcatttcca
aagtatggcggggtggatggtggatgctttgatagacaccttatattcagcaggttccgt
ccgatttctgtatttcgggaggccaatgaagatgaaagtggctttacttgttgtgcgttc
tctgctcgggagcggttcctgatgctgggtacctgcacagggcacctgaagttgtacaat
gtcttcagtgggcaggaagaggccagctacagttgccacaactccgccatcacgcacctg
gagccatctagggatggctctttattgttgacatctgcaacgtggagtcagcctctgtct
gcattgtgggggatgaagtctgtctttgacatcaagcattccttcacagacgaccattat
gtggaattcagcaagcattctcaggacagggtcattggcaccaagggggacattgcccat
atctatgatattcagactggcaacaagctattgactctgtttaacccagatcttgccaac
aactacaagaagaattgtgccacctttaaccctacagatgaccttgtcttaaacgatggt
gtcctctgggatgtccgctctgcacaagctattcataagtttgacaaattcaatatgacc
atcagtggcgttttccatcccaatgggctggaagttatagtgaacacagaaatttgggat
ctgcggactttccacttgctacacacagtgccagcgttggatcagtgtcgtgtggtcttc
aaccacacaggaacagttatgtatggagcaatgttacaggccgatgatgaagatgatctg
ctggaagagaggatgcggagcccctttggatcttctttcagaacattcaatgctacggat
tacaaaccaattgccactattgatgtaaaaaggaacatctttgacttgtgtactgattca
aaggactgttacttggcagttattgagaaccaaggaagtatggatgccctgaatatggat
acagtttgcaggctgtatgaggtgggaaggcagcgcttggcagaagatgaagaggacgag
gaggaagaccaggaggaggaggaacaggaagaagaggatgaggacgaggatgacgacgac
acagatgatcttgaggaactggacactgaccagctgctggaggctgatttggaggaagag
gaaaccaatgagaatgcgggtgaggatggagaaaatgacttctctccttctgatgatgag
gaattggccaaccttctggaagagggggatgaaggagaggatgaagattctgatgcagat
gaggaagttgagctcatccttggtgatactgacagctcagataattcagatttggaagat
gacataatcttgtctttgaacgagtga
DBGET
integrated database retrieval system
