Sphaerodactylus townsendi (Townsend's least gecko): 125430152
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Entry
125430152 CDS
T08213
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125430152 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125430152 (XPC)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125430152 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
125430152
NCBI-ProteinID:
XP_048347897
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Position
LG03:48088174..48110836
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AA seq
971 aa
AA seq
DB search
MGRKRKGGLPPLDGPGQKVRGAAAEAASGPAAPEQEDDFQEAKPSKSKALSEKRKRTCER
SVYHPPCRNSKAAANSRVKVDYNIEIEDKEGICSGLQSTFLQEETCVKREPAIKKIEDEE
EESCKKRKPAIKKRKDEDEEESEDEWEDVEELCEPEIGILKDISPVPALPNKMVEIEIET
PEQAKKRERSEKRQAEFETYLRRMMKRFNKEVHEDMHKVHLLCLLANGFYRNRICSQPDL
QAIGLSIIPAHFTKVPTDRVDRLYLSNLVKWFVATFTVNSELSDIEENWQSTLERRFAVY
AARDDEELVHIFLLILRSLQLLCRLVLSLQPIPLKETLGKGKPPTKKRSVSLVSEKLSNS
AKKPRVAPKNCSGSKSKQRAGQEETSSKSIEANRKPNTPEAKRKISKSTVLKGTQKKKES
DDGENNLKGREGLGRPKNDRQRRVASKVSYKEESGSDEGSGSEFHASEEDQDDSSISDDD
FANTSRKLGSSRGTPKARIAFNNRQKSTPSMLKEPKNPDSVEHLRKTTPSSSSKPPKKSN
KIISSSDDEEGSQEPVTQRGVDQWVEVFVEREDKWVDVNCVHGTVGQPPLCFRYATKPVC
YIIGFDNDGCVKDVTQRYDPAWMTLTRKRRVDAQWWDDTLNPYRSPFVEREKKEEKAFLA
QLQDKPLPTAVGEYKNHPLYALQRHLLKYEAIYPESAAVLGYCRGEAVYSRDCIHTLHSK
DTWLKQARVVRLGEVPYKMVKGYSNQARKARMMEPANREKKDLALFGLWQTETYQPPIAV
DGRVPRNEFGNVYLFQPSMLPIGCVQLKLPNLHKVARKLDIDCVPAVTGFDFHGGYSHAV
TEGYIVCEEYREVLVAAWENEEVEREKKENEKREKRVLGNWKLLVKGVLIRERLRKRYST
KNEAADGMMGAQTGFSSDEEGPCSKTGAEDMTVSWPQNREVEKQSREGKRTRKSQREKKG
EAKHLFPFEKL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaagcgcaaaggggggctgccccctctggacggaccgggccagaaagtcaga
ggagcagctgcagaggccgcctcgggtccggcagctcccgagcaggaggatgattttcaa
gaggcaaaaccaagtaagtctaaggctttgtctgaaaaaagaaagagaacttgtgagagg
agtgtctaccatccaccctgcaggaattcaaaggcggcagcaaactccagagtcaaagtt
gattataacatagaaatagaagataaagagggaatatgcagtggtttgcagagcactttt
ctgcaggaagagacatgtgtgaaaagagagcccgccatcaaaaagatagaggatgaagag
gaggagtcatgtaaaaaaagaaaacctgccatcaaaaagagaaaggatgaagatgaagag
gaaagtgaagatgagtgggaagatgtggaagaactctgtgagcctgagatagggattctg
aaagacatttctccagtgccagctctgcccaacaaaatggttgagatagagattgagaca
ccagaacaagcaaagaaaagagagagaagtgagaaaaggcaagctgagtttgagacatat
ctccgaagaatgatgaaacgcttcaacaaagaggttcatgaagatatgcacaaggttcac
ttgctgtgcttgttagcaaatggtttctatcggaacagaatctgcagtcagccagatctc
caagcgatcggcctttccataatcccagcccactttacaaaagtacctacggatcgtgta
gaccgcttatatctgtcaaaccttgtgaaatggtttgttgcaacctttactgtcaacagt
gagctctctgatattgaagaaaattggcagtccaccttggagaggcgtttcgctgtttat
gctgcacgagatgatgaagaattggtgcatatatttttgctcattctgaggtctttgcag
cttctgtgccggcttgtcttgtcgttacagcccattcctctgaaagagacattagggaag
ggaaagcccccaaccaagaagcgttctgtcagtttagtctctgagaaattgtctaattct
gccaaaaagcctagagttgcaccaaaaaattgctcaggatcaaagagcaaacaaagagca
ggccaagaggagacttcatcaaagagcatagaagctaacaggaaaccaaatacccctgaa
gccaaaaggaaaataagtaaatccacggtactgaagggtactcagaaaaaaaaggaatct
gatgatggtgaaaacaacttgaagggaagggaagggttggggaggcccaaaaatgaccgc
caacgaagagtggcctcaaaagtgtcttacaaagaggagagtggaagcgatgagggcagt
ggctctgaattccatgcttcagaagaagaccaggatgatagcagcatctctgacgatgat
tttgcaaatactagtaggaagcttggatcttcacggggaacaccgaaagcaagaatagcg
tttaataacagacagaaatctactccttcaatgttgaaagaacctaagaatccagacagt
gttgaacacttgaggaaaactaccccctcaagctcttcaaagcccccaaagaaaagtaac
aaaataatttccagtagtgatgatgaagaaggaagtcaggagccagtcacacagagaggc
gtggatcagtgggtggaagtttttgttgaacgagaagacaagtgggtggatgtgaattgt
gttcatggcacagttggtcagcctccgctgtgcttcagatatgccactaaaccagtgtgc
tatatcattggctttgataacgacgggtgtgtaaaggatgtaacacaaagatatgatccg
gcatggatgactttaacaaggaaaaggcgtgtggatgcccagtggtgggacgacactttg
aatccgtacagaagcccatttgtggaacgagagaaaaaagaagaaaaggcgtttctagct
cagcttcaagacaagcccctgccaacagccgttggtgaatacaagaaccacccgctttat
gccttgcagcgccatcttcttaaatatgaagctatctaccccgagtcagctgctgtgcta
ggatactgccgaggggaggctgtgtactccagagactgtatccacacactgcactctaag
gacacatggctgaagcaagctcgagtggtgaggctcggggaagtaccatataagatggtc
aaaggctattccaaccaggcaaggaaagcacgaatgatggaacctgcaaaccgggaaaaa
aaggacttggcgctctttggtctctggcagacagaaacttatcagccccctattgcagtg
gatggaagggttcctcgaaatgaatttgggaatgtgtatcttttccagcccagcatgtta
ccaataggctgcgtgcagctaaagcttcccaaccttcacaaagtggcacgtaaactggat
attgactgtgttccagctgttactggatttgattttcatggtggctactcacatgcagtc
actgaaggctacattgtctgtgaagaatacagagaggtgcttgtggcagcctgggagaat
gaagaagtagagagggaaaagaaagaaaatgagaagcgggagaagagagtgttggggaac
tggaaattgttggtgaaaggagttctgatccgagagagactgaggaaacgttactccact
aagaatgaagcagcagatggcatgatgggagcacagactggcttttcctctgatgaagaa
ggaccatgctcaaagactggagctgaagacatgactgtttcttggccccaaaatcgggaa
gtggaaaaacagagcagggaaggaaaaagaaccagaaagagccagcgggagaagaaagga
gaagcaaagcatttgttcccatttgagaagctgtaa
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