Sphaerodactylus townsendi (Townsend's least gecko): 125430602
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Entry
125430602 CDS
T08213
Symbol
BRCA2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03440
Homologous recombination
stow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125430602 (BRCA2)
03460 Fanconi anemia pathway
125430602 (BRCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125430602 (BRCA2)
03036 Chromosome and associated proteins [BR:
stow03036
]
125430602 (BRCA2)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125430602 (BRCA2)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125430602 (BRCA2)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125430602 (BRCA2)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
125430602 (BRCA2)
FA (Fanconi anemia) pathway
Downstream FA components
125430602 (BRCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
125430602
NCBI-ProteinID:
XP_048348570
LinkDB
All DBs
Position
LG04:33091376..33137894
Genome browser
AA seq
3125 aa
AA seq
DB search
MDKKNVPTSEGRSCFFEIFRMRCSESDLGPISLNWFEELTSEASPYDCKISEDDKYKTSC
LDQGTFKMPKKMLFTNSQLTSIPMTFQDQNKSLQLFESPVKEVDQSTTEAGRSASEVPAT
RTKLDLSNEVLSPPSNTCLIASPAVLNICATPLGNKSVLNGSLLCTPKVFQTQTPKCISE
SLGAEADPEMSWSSSLATPPTLSPTVLIATGDKATSGKMQRNERLALIMQSVLPKCGRSV
VKNKMNILSTAGTEELCSETDSKNQNFGKSLNGCFGIDELPNKTSVNQKSLNVLEDEEMH
KETDTARGIESSFSVCLASGKTFQTEMKTAKWSKNKYSYKAQHDSLQENNVVNVDSKDVN
IEEYETALNSSEHTAVIPVNRTQNHCVDQNNACVEEDMPSSVLSAWSQLDLSGLEITQLE
KVPSCYTSSPNVYASKNAEDHMSFTISEYASPLESCILNTSSLINVHKLLNINSPEKLPG
SKNPSVPVKMINSPKLVKGCETEQVSVINDPKNTSVLMENTTFAEFLESHSSCHHKYSQE
NSKTSSGSLGDGILSTAAGDGRGLKKSGLTTISFSNLKRRPKKFVYSLKDSSVCQEEGTM
LTDGSYLVPSGAELKSSNLDVSGTAIGNEATNKKTEISENKIHASSSKDTSEKENSVKCA
LLSNCNSFQERSSEKSVLAMQTLKRRNKQAPLELTSQHSLAQMVELGHRSKKISNVDEPS
EFTALEKGLDMRQPLLDNDKQIPLGHANHNENQGFAGFKTSSNKQIVLSDDNIRKGRLLF
KNIEDQFLKDLACEQMQCIPIQNVQENAEISAIRTNKLNKSVSNFSHVSDSQVSLTELSD
TPNIFPVYFRNASFHNMLKNQPEGKQNLTASEKAEVIELSNILEEAGSQFEFTQLRKQRT
VLQNSACKASGDTNKHEITELDVNSKAWKDDFKESCNLKPQRGSDRSPPKYIDTTEESAI
QEHSSEEIASVNVSSEKQNRECSVPNGLASLHCGLSDLVAYKTAGNKESSISNEIFNKPA
KLISNLDGVDKMHSLHKAKSKNNCLSRCDTCWNNPKYMTETDINWHQMVQAVSAEYMMKN
NARDTINFVKENMEKKSNGTGYNEDNIHISSTTEVNLKIVQKYSFHMTGNGLSAVENNHS
MLVSHQFINCEETHYNDLQETSDLTCLVEVTKTEQNYILNSIDEKENLNSNQQEKKIHNP
EGGYLVHTTAGQNILHPHLGNNRTLHMLPGYWIGTELDDMPSTSCSKTDAENKKGAIASV
KKSVDLTQNENLKHSSAMGFRTASGKHIAITDKSLAKATYILSEDCAFSEKDDPISNFVS
TGIQQKEKKYENINEVCKESEERIEKHNEVLNLKSGSNNPPDLLPDNVAIKQTKNLETVK
KLSQEINTAERRRKQDITEGLVTENNPTRTSSTSDVSKTLLLDCDNGQCSHVQEGFDAYA
KQDIQQPLSRNSCNVFTTNNKNWDLHSSKTISSVLKSDCSPLYHSSNNKDTNSCADNFVY
VSQTISPESLNAEKISTFEETAKNVNSMVPKCGLNLLNTNSLLKDSSSEISFSSFKLSTA
KPLAFSTANGKAVRISQEALKKARQLLRTDCCEPTKWNTEFQSKTSKRGILESCSDALGT
TKKIAENSDVAQFPGAEKYPWEDRQALQHVGPISLDVGSQSDCQTSCFQMTDRLSHNGAS
NKWNHIKSDCFRGTRNCELFSTASGKPVQLTEESLKKARLLFSDEEENNSSAHLSHVSKD
SCAEVFSVGNKMTPEKGKPLMSRRERLPNTEVKSQSFCGFSTASGKQVRISEKALQKVTG
FFKEIDCTSTDDFFEDGQNLQLDHNIPIEAPYVGPTAHDEAISKSKLQEKSYTEKQNQPV
RWEKNFPCTKQIGPLEGHQPCPNRIETTNATNHVTVSEGKLDSCYPVYSQTPENDLETEA
SESAKAFMEDDELTDSEVQKNKRTPVFVPGKTNYLLSNTRTGKRRLEEENKCGEPPIKRK
LLPEFDRSGGPIRSSLKASKAALEDTVNDRRKFKYSINLKPVISSPFSSSEERQVLHLNL
TTPDQLMKDSKNKYNGYNQQHLSTPLLSRPLDSWSPFNKSLAEEKKIENDYIGRKPVKVF
VPPFKTKSEIPEDELTYSKKYDLLRSKNINKNENLNPENIQENTTEPENNSFEHDDAARI
SLEDSEFTDINLGLTEMIKDCQYARNLQEMRIIKKKRQRICPQPGNLYLVKTCATACRIP
LKDAVSKKSPGSYFSKQLYTFGVSKQCLKINSSNAEDFQFLIQDFFSKECFLERHGIQLA
DGGYLVPTDEGKAGKEEFYRALCDTPGVDPQLISKAWVYNHYKWIIWKLAVMEVAFPEEF
ANRCLTPERVLLQLKYRYDVEVDKSHRSAIKRITERDDVAGKTLILCVSKIISLSSKVSP
IYDKSTVMENKREAAVIEVTDGWYGIRAVVDSALRSLLCRGRLRVGQKIIVHGAELVGSQ
DACTPLEAPESLALKISANSTRRARWYAKLGYHRDPRPFCLPLSSLLSEGGTAGCVDVII
QRAYPIQWMEKLSTGSYMFRNERAEEREAAKHKGDQQKTMQALLAKIQAKFEKNEDEGKR
LLKSRILTRQQIRSLQDGADLYEAILNAPDPAYMEGYFSEEQLKALNSHRQMVTDKKQAQ
IEAEFRKAVESAEQGDPSSCKRDVTPIMKLRIVDYRNEEPSKEVLLSIWRPSSHVHTLLK
EGGRYRIFQLAATQSKGKWEAANIQLTATKKTQYLQLPVSEEILPHIYQPRECLRYSKMS
EPCFQPACSEVDLVGYVVSLRKGTGSSVLYLSDESHNLIAVQICADFKHLAVEDIISPSK
LISATNLKWQPKLRSDIPVLFAGDLSTFSANPKERHLQGRFNELKNIVENNCCFGKDVQQ
RLMNLLQAADQQAFNLPKECSLNPFPWKSSGRNTHSTATPTGERRRQSPLTVGKMNSTPA
LSLDSEKMIQDPQETSKNYKKRKAMDLLSRVPSPPPVKPICTFVSPSLMKAFQPPRSCNN
QHARSLERIACKSAKKPPLKRLNEICFPLKNNFVADEELAMINTQVLLNKLPKEKKVDFT
DNIIYAVVSDSPDSSLPTETMSQSAGRKNTLQESDEETETPEKGASESKSSLAVQKEQQK
QRRQR
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaatgttcccacatctgagggaagatcatgtttcttcgaaatattcaga
atgcgatgcagtgaatcagacttaggaccaataagtctcaactggtttgaagagctgact
tcagaagcttcaccttatgactgcaaaatatcagaagatgataagtataaaactagctgc
ctggatcaaggtacttttaagatgccaaagaagatgctgtttacaaatagccaattaact
tcaattccaatgacttttcaagatcagaataaaagcttacagctgtttgaatctccagta
aaagaagtggatcagagcacaacagaagcaggcagatcagctagtgaagttcctgcaaca
aggacaaaattggatctctcaaatgaagtactcagtcctccttcgaacacctgtctcatt
gcaagcccagctgttttaaatatatgtgcaacacctctaggaaataaatctgtgttaaat
ggaagtttgctttgtacgccaaaggtttttcagactcagacaccaaaatgcatttctgaa
agcttgggagcagaagcagatcctgaaatgtcttggtcaagttcattggctacaccccct
acgctttccccaacagtactgatagctacaggagataaggcgacttctggaaaaatgcaa
cgtaatgaaagacttgctttgatcatgcaaagtgttttacccaagtgtgggagaagtgtt
gttaagaacaagatgaatatactgtctacagcaggaacagaagaactgtgttcagaaacc
gatagcaaaaaccaaaattttggaaaatcattaaatggctgctttggaatagacgaactt
cccaataagacaagtgtaaaccaaaagtcactaaacgttttagaagatgaagagatgcat
aaagaaacggacactgcaagaggaattgaaagtagtttttctgtatgccttgcaagtggc
aaaacttttcaaacagaaatgaaaacagccaaatggagtaagaataaatattcttacaaa
gcgcaacatgatagccttcaagaaaataatgtagtgaatgtggattctaaagatgttaat
atagaggaatatgaaaccgcattaaattcctccgagcacacagcggtcattccagttaac
agaacacaaaaccactgtgtggatcaaaataatgcatgtgtagaagaagacatgccatca
tctgtactctctgcatggtctcagttggacttgtctggtcttgaaataacacagctggaa
aaagtaccttcatgttatactagctcgcctaatgtatatgccagtaaaaatgcagaagat
catatgtcatttactatcagcgagtatgctagtcctctagaatcgtgcatactaaacaca
tcaagtctaataaatgtccataagttattgaatattaattctccagaaaaactcccaggt
tccaaaaatccttcagtgcctgttaaaatgataaacagcccaaagctagtgaaaggctgt
gagactgagcaagtttctgtcataaatgaccccaaaaatacttccgtcttgatggaaaac
acaacttttgcagagttcttggaatctcatagcagttgccatcataaatactcacaagaa
aattctaagacttcctctggctctcttggagatggtattttatcaacagctgctggtgat
ggcagaggtctaaaaaagtcaggcttgactaccatctcattttccaatcttaaaaggaga
cccaaaaaatttgtttattcgctaaaagattcttcagtatgtcaggaagaaggaactatg
ctgacagacggatcttatcttgtgccgtctggtgcagagttaaaatcttccaatttggac
gtttctggaacggccattgggaatgaagctactaataaaaaaacagagataagtgaaaac
aagatccatgcaagtagtagcaaagacacttcagaaaaagaaaacagtgtaaaatgtgcc
ctcctctcaaactgcaattctttccaagaaagaagttctgagaaatctgtattggcaatg
caaacattgaaaaggaggaacaagcaagcacccttggaactaacttcacagcattctttg
gctcaaatggttgaacttgggcatcggtcaaagaaaatatccaatgtagatgagccttct
gagtttacagcactggagaaaggtttagatatgagacaacctcttctagataatgacaag
cagataccgttaggacatgcaaatcataatgaaaaccaagggtttgctggcttcaaaact
tcatccaataaacagatagttctatctgatgacaatatcagaaaaggcagactgctgttt
aaaaacatagaagatcaatttcttaaagatttagcctgtgaacaaatgcagtgtattcca
attcaaaatgtacaagaaaatgctgagatttctgcaattagaactaataaattaaacaaa
agtgtatccaacttttcacatgtttctgattcacaagtgagccttactgaattaagtgat
accccaaacatctttcctgtgtatttcaggaatgcatcatttcataacatgcttaaaaat
caacctgaaggaaaacaaaatttaacagcaagtgaaaaagctgaggtcattgagctttct
aatatattggaagaagcaggtagtcagtttgaatttacacagcttagaaagcaaaggact
gtgctgcaaaacagtgcttgtaaagcatcaggagacaccaacaaacatgaaataactgaa
ctggacgtgaattccaaagcgtggaaagatgattttaaggaaagctgcaatctaaaacct
cagagaggcagtgatcggtctccccccaagtatatagacaccactgaagaatctgcaata
caggaacatagcagtgaagagattgcgtcagttaacgtgtcaagcgaaaaacaaaacagg
gaatgctctgttccgaatgggttagcatctctgcattgtggcttgtcggatttggtggcg
tataaaacagctgggaataaagagagttctatttctaatgagatctttaacaaacctgca
aaattaattagtaatctagatggagtggataaaatgcatagccttcataaagccaagtca
aaaaataattgtttaagcagatgtgatacttgttggaataatcctaaatatatgacagaa
actgacattaattggcatcagatggtccaagcagtaagtgctgaatacatgatgaaaaat
aatgcaagagacacgattaactttgtgaaagaaaacatggaaaagaagtcaaatggaaca
ggttacaacgaagacaatattcacatttctagtacaacagaagttaatctaaaaattgtt
caaaagtattcctttcacatgacaggaaatggcctgtcagctgttgaaaacaatcacagc
atgttagtctcacatcagtttataaactgtgaagagactcattataatgatttgcaagaa
acatctgacctaacatgtttagttgaagttactaaaactgaacagaattacattttgaat
agtatagatgaaaaagaaaacctaaattctaaccaacaagagaaaaaaatacacaatcca
gaaggtggttatttagtacacaccacggctggtcagaacattcttcatccccacttagga
aataacagaacacttcacatgttgcctggctattggatagggacagagctcgatgatatg
ccatcaacttcctgtagtaagacagatgccgaaaacaagaagggggccatcgcttcagtc
aaaaagagtgttgacttaacccaaaatgaaaacttaaagcacagtagtgcaatgggattt
cgcacagctagtggtaagcacattgcaatcactgacaaatctttagctaaggcaacatat
attctttcagaagactgcgctttctcggaaaaagatgatcctattagtaattttgtcagc
actggcattcaacaaaaagaaaaaaagtatgagaacataaatgaagtatgtaaggaatct
gaagaaagaattgagaagcataacgaagttctcaatcttaaaagtggttctaacaatccc
ccagacttgctgccagataatgttgccattaagcagactaaaaatcttgaaacagttaaa
aaactttcccaagagattaatactgctgaaagaagaagaaaacaggacataactgaaggt
ttggtaacagagaacaatccaacacgtacatcaagcacaagtgatgtttcaaaaacttta
ttactggattgtgataatgggcaatgttcacatgttcaagaaggttttgatgcgtatgca
aaacaagatattcagcagccattatctagaaattcatgtaatgtattcactactaacaac
aagaattgggatttacattcttcaaaaacgatttcctctgttttaaagagtgattgttct
ccattataccattcatcaaataataaggacacaaactcctgtgcagataactttgtttat
gtgtcccaaacaatatcaccagaaagtctgaatgcagaaaagattagcacctttgaagaa
actgctaaaaatgttaatagtatggtccctaaatgtggtttaaacttactgaacacaaac
agcttgctaaaagattcatctagtgaaatatctttctcttctttcaagctttcaacagct
aagccacttgcattcagtacagcaaatggaaaagctgtcagaatttctcaggaagcatta
aaaaaggccagacagttacttcgtactgactgctgtgaacccacaaaatggaatacagaa
tttcaatctaaaactagtaaacgtggcattttagaaagctgttcggatgccttgggaacc
acaaagaaaattgcagaaaattcagatgtagcccaatttcccggagctgagaaatatccc
tgggaagatagacaagcattgcagcacgtggggcccatttccttggacgttgggtctcag
tcagattgtcaaacatcatgttttcaaatgactgataggctttctcataacggggcctcc
aacaaatggaaccacatcaaatcagactgttttagaggtactcgcaattgtgagctcttc
agcacagcaagtggcaaacctgtacaattaactgaagagtcattgaagaaggcaaggcta
cttttttctgatgaggaagaaaataattcatcggctcatctgagtcacgtgtcaaaggat
agctgtgctgaagtattttctgttggaaataaaatgacccctgaaaaaggtaaaccatta
atgtccagaagagagagacttccaaacactgaagtaaagtcgcagtcgttttgtggtttt
agtacggctagtgggaaacaagtgcgtatctctgagaaggctctccagaaagttacaggt
ttctttaaagaaattgattgtaccagcaccgatgatttctttgaggatggacagaatttg
cagctggatcataatatacccatagaagctccttatgtaggacccacagctcatgatgaa
gccatttcaaagtctaaactgcaagagaagtcttatactgagaaacagaatcaaccagtg
cgatgggaaaaaaactttccatgtacaaagcagataggacctctggaaggacaccagcct
tgcccaaataggatagaaacaacaaatgccacaaaccatgtcactgttagtgaaggaaag
ctggattcttgttatcctgtgtactcccaaaccccagaaaatgacttggaaacggaagct
tcagaaagtgccaaagcattcatggaagatgatgagctcaccgattcagaagtccagaaa
aataaaagaacaccagtctttgttcctgggaaaactaattatttgctgtcaaatactaga
actgggaaaaggcgcctagaagaagagaacaaatgtggagaacctcctattaaaagaaaa
ttgttacctgagttcgatagatcaggagggcccataagatcatctttgaaagcctcaaaa
gctgctctggaggatacagtgaacgacagacggaagttcaaatacagtatcaacttaaag
cctgtaattagttccccttttagttcttcagaagagcggcaagtcttgcatttaaatctt
accactccagaccagcttatgaaagattctaaaaataaatataatgggtataatcagcaa
catttatcaacgccacttttgagccgaccattagattcctggtccccttttaataagagc
ttagctgaggaaaagaagatagaaaatgactacattggacggaaacctgtcaaagtcttt
gtaccaccttttaaaacaaagtcagaaattcctgaggatgaactaacttacagcaaaaaa
tatgacttattgagaagcaaaaatattaataaaaatgaaaatctaaatcctgaaaatatt
caggaaaacacaactgaaccagaaaacaattcctttgaacatgatgacgctgcacgaata
tcattggaggattcagaattcacagatatcaatttaggtttaacagaaatgataaaagat
tgtcagtacgccagaaatctacaagaaatgagaattataaagaaaaaaaggcaaagaatt
tgcccacaaccaggcaacttgtatcttgtgaaaacatgtgccacagcatgtagaattcct
cttaaagatgcagtgagcaagaaatcgccaggttcttatttcagtaaacagctgtatacg
tttggtgtttcaaagcagtgcttaaaaattaacagctcaaatgcagaagattttcagttt
ctcattcaggattttttcagtaaagaatgttttctagaaaggcatggaatacaattggct
gatggaggatatcttgttcccactgatgagggcaaggcaggaaaagaggaattctacagg
gctttatgtgatacacctggagtagatccacagctcatttcaaaagcctgggtttacaac
cactacaagtggatcatatggaaactggcagttatggaagttgcatttccagaagaattt
gctaacagatgcttgactccagaaagagtactacttcagctaaaatacagatacgacgtg
gaagttgacaaaagtcaccgatcagctatcaaaagaataacagagagagatgacgttgct
ggtaaaacactcatcctgtgtgtttctaaaattatatcattaagttcaaaggtgtctccc
atctatgacaaaagcactgtgatggaaaacaaacgagaagcagctgtgattgaagttaca
gatggctggtatgggattagggctgtcgtggactctgctctgcgatcactgttgtgtaga
ggaaggctgcgtgtgggtcagaagatcattgtacacggagcagaacttgtaggttcacag
gatgcatgcactcccttggaagctccggaatcacttgccctgaagatttcagctaacagt
actcgacgtgcacgatggtatgccaaattaggatatcatagggacccccggcccttctgt
ttgccgttatcgtcgctccttagtgagggtgggaccgctggttgtgttgatgtgattatt
caaagagcttatcccatacagtggatggaaaagctatcaacaggctcctacatgtttcgt
aatgaacgagctgaagaaagagaagccgcaaaacataaaggcgatcaacaaaagaccatg
caagcattgcttgcaaaaatacaagctaaatttgaaaagaatgaggatgaaggcaaaaga
ctactgaaatcacgcatactaaccaggcaacagattcgctccctgcaagatggtgccgac
ctttatgaggcaattcttaatgctcctgatcccgcttacatggagggctattttagtgag
gagcaattaaaagcactgaacagtcacaggcagatggtaactgataagaagcaagcacag
atagaagctgaattcaggaaagcagtggaatctgctgagcagggggaccccagctcctgc
aaaagggatgtaacccctataatgaaactacgcattgtggattatagaaatgaagaacca
agcaaagaagtcctgttgagcatctggcgcccatcatcacatgttcataccctcctaaag
gaaggaggtcggtacagaatcttccaactagctgcaactcaatccaaaggcaagtgggag
gcggctaatatacagttaacggctaccaagaaaactcagtatctacagctaccggtctct
gaagagattctgccacatatttatcagccaagggaatgtctgaggtacagcaagatgtct
gagccctgtttccagccagcctgctctgaagtggatttggtgggatatgtagtttctctc
aggaaaggaacaggctcctctgtgttgtatttgtcagatgaaagtcataatctgatagca
gtccagatctgtgcagatttcaagcatcttgccgtagaagacattattagtccttctaag
ttgatttctgcaaccaatctcaaatggcaaccaaagcttagatcagacattccagtgtta
tttgctggagatctttctacattctccgccaatccaaaggaaagacatcttcaagggaga
tttaatgaactgaaaaacattgtagagaacaactgttgttttggcaaagatgtgcaacag
agacttatgaatttgcttcaagcagctgaccaacaagcatttaacttgcccaaagaatgt
agcttgaatcctttcccctggaaatctagtggaagaaatacacattcaactgcaactcct
actggtgaacgaagacgtcagagccccttgactgttggaaagatgaattcgacaccagcg
ctttcactagactcagaaaaaatgatccaagatccacaagaaacttctaagaactataag
aagaggaaagcaatggacctgctcagtcgagtgccttcccctcctccagtaaagccaatc
tgcacatttgtttctccatctctgatgaaggcatttcagccacctcggagctgtaataat
cagcatgcaagatcattagaacgaatagcttgtaagtctgctaaaaaacctcccctgaaa
agattaaatgagatttgcttccctctcaaaaacaattttgttgctgatgaagaacttgcc
atgataaatacgcaagtccttttaaataaacttccaaaagagaaaaaagttgactttaca
gataacattatttatgcagtagttagtgattcaccagatagcagtttgccaacagagact
atgtcccagtcagctggtagaaaaaatacattgcaagagagtgatgaagaaactgagact
cctgaaaagggtgcaagtgaatctaagagttcattggctgtgcagaaggagcagcaaaaa
cagcgaagacagagataa
DBGET
integrated database retrieval system
